RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 NOC3LQ8WTT2 800 aaKnown RBP26.19■■□□□ 1.78
APOE-202ENST00000425718 SAAL1Q96ER3 474 aa26.19■■□□□ 1.78
APOE-202ENST00000425718 RNF39Q9H2S5 420 aa26.19■■□□□ 1.78
APOE-202ENST00000425718 RBAKQ9NYW8 714 aaPredicted RBP26.19■■□□□ 1.78
APOE-202ENST00000425718 CNTN3Q9P232 1028 aa26.19■■□□□ 1.78
APOE-202ENST00000425718 RWDD3Q9Y3V2 267 aa26.19■■□□□ 1.78
APOE-202ENST00000425718 TBKBP1A7MCY6 615 aa26.18■■□□□ 1.78
APOE-202ENST00000425718 SLC16A3O15427 465 aaKnown RBP26.18■■□□□ 1.78
APOE-202ENST00000425718 CXCL8P10145 99 aa26.18■■□□□ 1.78
APOE-202ENST00000425718 FGFR1P11362 822 aa26.18■■□□□ 1.78
APOE-202ENST00000425718 BTG3Q14201 252 aaPredicted RBP26.18■■□□□ 1.78
APOE-202ENST00000425718 XKR4Q5GH76 650 aa26.18■■□□□ 1.78
APOE-202ENST00000425718 CLLU1OSQ5K130 101 aa26.18■■□□□ 1.78
APOE-202ENST00000425718 CEP135Q66GS9 1140 aa26.18■■□□□ 1.78
APOE-202ENST00000425718 TTI2Q6NXR4 508 aa26.18■■□□□ 1.78
APOE-202ENST00000425718 FAM117BQ6P1L5 589 aa26.18■■□□□ 1.78
APOE-202ENST00000425718 ZC3H3Q8IXZ2 948 aaKnown RBP26.18■■□□□ 1.78
APOE-202ENST00000425718 CSGALNACT2Q8N6G5 542 aa26.18■■□□□ 1.78
APOE-202ENST00000425718 CASD1Q96PB1 797 aa26.18■■□□□ 1.78
APOE-202ENST00000425718 FAM193BQ96PV7 902 aaPredicted RBP26.18■■□□□ 1.78
APOE-202ENST00000425718 GAD1Q99259 594 aa26.18■■□□□ 1.78
APOE-202ENST00000425718 RC3H2Q9HBD1 1191 aaKnown RBP26.18■■□□□ 1.78
APOE-202ENST00000425718 NLRC5Q86WI3 1866 aa26.17■■□□□ 1.78
APOE-202ENST00000425718 TTC26A0AVF1 554 aa26.17■■□□□ 1.78
APOE-202ENST00000425718 THP07101 528 aa26.17■■□□□ 1.78
APOE-202ENST00000425718 KCNE1P15382 129 aa26.17■■□□□ 1.78
APOE-202ENST00000425718 MLH1P40692 756 aa26.17■■□□□ 1.78
APOE-202ENST00000425718 SMAD3P84022 425 aaKnown RBP26.17■■□□□ 1.78
APOE-202ENST00000425718 RNASELQ05823 741 aaKnown RBP26.17■■□□□ 1.78
APOE-202ENST00000425718 ENOX2Q16206 610 aaKnown RBP26.17■■□□□ 1.78
APOE-202ENST00000425718 CRELD2Q6UXH1 353 aaPredicted RBP26.17■■□□□ 1.78
APOE-202ENST00000425718 ALKAL1Q6UXT8 129 aa26.17■■□□□ 1.78
APOE-202ENST00000425718 INTS8Q75QN2 995 aaKnown RBP26.17■■□□□ 1.78
APOE-202ENST00000425718 FNBP1Q96RU3 617 aa26.17■■□□□ 1.78
APOE-202ENST00000425718 METTL14Q9HCE5 456 aaKnown RBP26.17■■□□□ 1.78
APOE-202ENST00000425718 RNF19AQ9NV58 838 aa26.17■■□□□ 1.78
APOE-202ENST00000425718 INPP5FQ9Y2H2 1132 aa26.17■■□□□ 1.78
APOE-202ENST00000425718 GOLGA8IPA6NC78 632 aa26.16■■□□□ 1.78
APOE-202ENST00000425718 GOLGA8JA6NMD2 632 aa26.16■■□□□ 1.78
APOE-202ENST00000425718 KRT13P13646 458 aa26.16■■□□□ 1.78
APOE-202ENST00000425718 TNFSF9P41273 254 aa26.16■■□□□ 1.78
APOE-202ENST00000425718 SLC10A6Q3KNW5 377 aa26.16■■□□□ 1.78
APOE-202ENST00000425718 LRIT3Q3SXY7 679 aa26.16■■□□□ 1.78
APOE-202ENST00000425718 FILIP1Q7Z7B0 1213 aa26.16■■□□□ 1.78
APOE-202ENST00000425718 FAM114A1Q8IWE2 563 aa26.16■■□□□ 1.78
APOE-202ENST00000425718 FIBCD1Q8N539 461 aa26.16■■□□□ 1.78
APOE-202ENST00000425718 SP7Q8TDD2 431 aaPredicted RBP26.16■■□□□ 1.78
APOE-202ENST00000425718 CACTINQ8WUQ7 758 aaKnown RBP26.16■■□□□ 1.78
APOE-202ENST00000425718 AAASQ9NRG9 546 aa26.16■■□□□ 1.78
APOE-202ENST00000425718 C2CD2Q9Y426 696 aa26.16■■□□□ 1.78
APOE-202ENST00000425718 TRIM49BA6NDI0 452 aa26.15■■□□□ 1.78
APOE-202ENST00000425718 SEZ6Q53EL9 994 aa26.15■■□□□ 1.78
APOE-202ENST00000425718 TMEM192Q8IY95 271 aa26.15■■□□□ 1.78
APOE-202ENST00000425718 FAM186BQ8IYM0 893 aa26.15■■□□□ 1.78
APOE-202ENST00000425718 ENOX1Q8TC92 643 aaKnown RBP26.15■■□□□ 1.78
APOE-202ENST00000425718 FAM212AQ96EL1 285 aa26.15■■□□□ 1.78
APOE-202ENST00000425718 MFSD14AQ96MC6 490 aa26.15■■□□□ 1.78
APOE-202ENST00000425718 SAMD11Q96NU1 681 aa26.15■■□□□ 1.78
APOE-202ENST00000425718 BPIFA3Q9BQP9 254 aa26.15■■□□□ 1.78
APOE-202ENST00000425718 KLK14Q9P0G3 267 aa26.15■■□□□ 1.78
APOE-202ENST00000425718 UBQLN1Q9UMX0 589 aaKnown RBP26.15■■□□□ 1.78
APOE-202ENST00000425718 MEIS3P2A8K0S8 358 aa26.14■■□□□ 1.78
APOE-202ENST00000425718 AP3M2P53677 418 aa26.14■■□□□ 1.78
APOE-202ENST00000425718 PMS1P54277 932 aaKnown RBP26.14■■□□□ 1.78
APOE-202ENST00000425718 STX17P56962 302 aa26.14■■□□□ 1.78
APOE-202ENST00000425718 CYP24A1Q07973 514 aa26.14■■□□□ 1.78
APOE-202ENST00000425718 PSMD6Q15008 389 aa26.14■■□□□ 1.78
APOE-202ENST00000425718 ZBTB41Q5SVQ8 909 aa26.14■■□□□ 1.78
APOE-202ENST00000425718 CBWD2Q8IUF1 395 aa26.14■■□□□ 1.78
APOE-202ENST00000425718 TMC2Q8TDI7 906 aa26.14■■□□□ 1.78
APOE-202ENST00000425718 UROC1Q96N76 676 aa26.14■■□□□ 1.78
APOE-202ENST00000425718 TBC1D13Q9NVG8 400 aa26.14■■□□□ 1.78
APOE-202ENST00000425718 COLQQ9Y215 455 aaPredicted RBP26.14■■□□□ 1.78
APOE-202ENST00000425718 SMIM28A0A1B0GU29 152 aa26.13■■□□□ 1.77
APOE-202ENST00000425718 LACTBL1A8MY62 500 aa26.13■■□□□ 1.77
APOE-202ENST00000425718 PRKCSHP14314 528 aaPredicted RBP26.13■■□□□ 1.77
APOE-202ENST00000425718 LAG3P18627 525 aa26.13■■□□□ 1.77
APOE-202ENST00000425718 CYP3A5P20815 502 aa26.13■■□□□ 1.77
APOE-202ENST00000425718 SCNN1GP51170 649 aa26.13■■□□□ 1.77
APOE-202ENST00000425718 TMEM132DQ14C87 1099 aa26.13■■□□□ 1.77
APOE-202ENST00000425718 SPATA1Q5VX52 437 aa26.13■■□□□ 1.77
APOE-202ENST00000425718 RDH13Q8NBN7 331 aa26.13■■□□□ 1.77
APOE-202ENST00000425718 BEST2Q8NFU1 509 aa26.13■■□□□ 1.77
APOE-202ENST00000425718 KIF12Q96FN5 646 aa26.13■■□□□ 1.77
APOE-202ENST00000425718 ZFP42Q96MM3 310 aa26.13■■□□□ 1.77
APOE-202ENST00000425718 DUSP9Q99956 384 aaKnown RBP26.13■■□□□ 1.77
APOE-202ENST00000425718 TMEM175Q9BSA9 504 aa26.13■■□□□ 1.77
APOE-202ENST00000425718 FUCA2Q9BTY2 467 aa26.13■■□□□ 1.77
APOE-202ENST00000425718 DNAJC25Q9H1X3 360 aa26.13■■□□□ 1.77
APOE-202ENST00000425718 THAP9Q9H5L6 903 aa26.13■■□□□ 1.77
APOE-202ENST00000425718 TRIOBPQ9H2D6 2365 aa26.13■■□□□ 1.77
APOE-202ENST00000425718 SMTNL1A8MU46 457 aa26.12■■□□□ 1.77
APOE-202ENST00000425718 STX10O60499 249 aa26.12■■□□□ 1.77
APOE-202ENST00000425718 TUSC3Q13454 348 aa26.12■■□□□ 1.77
APOE-202ENST00000425718 ANO6Q4KMQ2 910 aa26.12■■□□□ 1.77
APOE-202ENST00000425718 PAN2Q504Q3 1202 aaKnown RBP26.12■■□□□ 1.77
APOE-202ENST00000425718 SPOUT1Q5T280 376 aaKnown RBP26.12■■□□□ 1.77
APOE-202ENST00000425718 LRRC55Q6ZSA7 311 aa26.12■■□□□ 1.77
APOE-202ENST00000425718 FRMD5Q7Z6J6 570 aa26.12■■□□□ 1.77
APOE-202ENST00000425718 WDR49Q8IV35 697 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms