RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 FRMD3A2A2Y4 597 aa24.4■■□□□ 1.5
PTCHD3P2-201ENST00000424937 GCNT3O95395 438 aa24.4■■□□□ 1.5
PTCHD3P2-201ENST00000424937 CXCL14O95715 111 aa24.4■■□□□ 1.5
PTCHD3P2-201ENST00000424937 GLP2RO95838 553 aa24.4■■□□□ 1.5
PTCHD3P2-201ENST00000424937 ASIC1P78348 528 aa24.4■■□□□ 1.5
PTCHD3P2-201ENST00000424937 NUCB2P80303 420 aa24.4■■□□□ 1.5
PTCHD3P2-201ENST00000424937 AMPD3Q01432 767 aa24.4■■□□□ 1.5
PTCHD3P2-201ENST00000424937 DLX2Q07687 328 aaPredicted RBP24.4■■□□□ 1.5
PTCHD3P2-201ENST00000424937 HSP90AA2PQ14568 343 aaPredicted RBP24.4■■□□□ 1.5
PTCHD3P2-201ENST00000424937 NAB2Q15742 525 aa24.4■■□□□ 1.5
PTCHD3P2-201ENST00000424937 CLUL1Q15846 466 aa24.4■■□□□ 1.5
PTCHD3P2-201ENST00000424937 LEXMQ3ZCV2 418 aa24.4■■□□□ 1.5
PTCHD3P2-201ENST00000424937 ZNF720Q7Z2F6 126 aa24.4■■□□□ 1.5
PTCHD3P2-201ENST00000424937 MRPL43Q8N983 215 aaKnown RBP24.4■■□□□ 1.5
PTCHD3P2-201ENST00000424937 HVCN1Q96D96 273 aa24.4■■□□□ 1.5
PTCHD3P2-201ENST00000424937 PPP1R10Q96QC0 940 aaKnown RBP24.4■■□□□ 1.5
PTCHD3P2-201ENST00000424937 HERC2P3Q9BVR0 1158 aa24.4■■□□□ 1.5
PTCHD3P2-201ENST00000424937 TRIM9Q9C026 710 aa24.4■■□□□ 1.5
PTCHD3P2-201ENST00000424937 OLFML3Q9NRN5 406 aa24.4■■□□□ 1.5
PTCHD3P2-201ENST00000424937 PLXNA3P51805 1871 aa24.39■■□□□ 1.5
PTCHD3P2-201ENST00000424937 SOD2P04179 222 aa24.39■■□□□ 1.49
PTCHD3P2-201ENST00000424937 RBM10P98175 930 aaKnown RBP24.39■■□□□ 1.49
PTCHD3P2-201ENST00000424937 SLC39A4Q6P5W5 647 aa24.39■■□□□ 1.49
PTCHD3P2-201ENST00000424937 PYM1Q9BRP8 204 aaKnown RBP24.39■■□□□ 1.49
PTCHD3P2-201ENST00000424937 COL25A1Q9BXS0 654 aaPredicted RBP24.39■■□□□ 1.49
PTCHD3P2-201ENST00000424937 SCAND2PQ9GZW5 306 aaPredicted RBP24.39■■□□□ 1.49
PTCHD3P2-201ENST00000424937 ADAM28Q9UKQ2 775 aa24.39■■□□□ 1.49
PTCHD3P2-201ENST00000424937 BARX2Q9UMQ3 279 aaPredicted RBP24.39■■□□□ 1.49
PTCHD3P2-201ENST00000424937 SMIM28A0A1B0GU29 152 aa24.38■■□□□ 1.49
PTCHD3P2-201ENST00000424937 PPP1R37O75864 691 aa24.38■■□□□ 1.49
PTCHD3P2-201ENST00000424937 KIF4AO95239 1232 aa24.38■■□□□ 1.49
PTCHD3P2-201ENST00000424937 URODP06132 367 aa24.38■■□□□ 1.49
PTCHD3P2-201ENST00000424937 BMP1P13497 986 aa24.38■■□□□ 1.49
PTCHD3P2-201ENST00000424937 COASYQ13057 564 aa24.38■■□□□ 1.49
PTCHD3P2-201ENST00000424937 PTPN14Q15678 1187 aa24.38■■□□□ 1.49
PTCHD3P2-201ENST00000424937 TPRNQ4KMQ1 711 aa24.38■■□□□ 1.49
PTCHD3P2-201ENST00000424937 ADALQ6DHV7 355 aa24.38■■□□□ 1.49
PTCHD3P2-201ENST00000424937 LLGL2Q6P1M3 1020 aa24.38■■□□□ 1.49
PTCHD3P2-201ENST00000424937 FUT10Q6P4F1 479 aa24.38■■□□□ 1.49
PTCHD3P2-201ENST00000424937 ALKAL1Q6UXT8 129 aa24.38■■□□□ 1.49
PTCHD3P2-201ENST00000424937 TMEM87AQ8NBN3 555 aa24.38■■□□□ 1.49
PTCHD3P2-201ENST00000424937 VN1R2Q8NFZ6 395 aa24.38■■□□□ 1.49
PTCHD3P2-201ENST00000424937 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.38■■□□□ 1.49
PTCHD3P2-201ENST00000424937 ADAMTS19Q8TE59 1207 aa24.38■■□□□ 1.49
PTCHD3P2-201ENST00000424937 HASPINQ8TF76 798 aa24.38■■□□□ 1.49
PTCHD3P2-201ENST00000424937 MSTO1Q9BUK6 570 aa24.38■■□□□ 1.49
PTCHD3P2-201ENST00000424937 GDPD2Q9HCC8 539 aa24.38■■□□□ 1.49
PTCHD3P2-201ENST00000424937 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.37■■□□□ 1.49
PTCHD3P2-201ENST00000424937 A0A1B0GVL5 298 aa24.37■■□□□ 1.49
PTCHD3P2-201ENST00000424937 TISP43B9A030 160 aa24.37■■□□□ 1.49
PTCHD3P2-201ENST00000424937 TADA2AO75478 443 aa24.37■■□□□ 1.49
PTCHD3P2-201ENST00000424937 CXCL8P10145 99 aa24.37■■□□□ 1.49
PTCHD3P2-201ENST00000424937 MYBP10242 640 aa24.37■■□□□ 1.49
PTCHD3P2-201ENST00000424937 PFKFB1P16118 471 aa24.37■■□□□ 1.49
PTCHD3P2-201ENST00000424937 CASP5P51878 434 aa24.37■■□□□ 1.49
PTCHD3P2-201ENST00000424937 XKR4Q5GH76 650 aa24.37■■□□□ 1.49
PTCHD3P2-201ENST00000424937 L1TD1Q5T7N2 865 aaKnown RBP24.37■■□□□ 1.49
PTCHD3P2-201ENST00000424937 PTCRAQ6ISU1 281 aaPredicted RBP24.37■■□□□ 1.49
PTCHD3P2-201ENST00000424937 CEP57L1Q8IYX8 460 aa24.37■■□□□ 1.49
PTCHD3P2-201ENST00000424937 ZMAT2Q96NC0 199 aaKnown RBP24.37■■□□□ 1.49
PTCHD3P2-201ENST00000424937 STRA6Q9BX79 667 aa24.37■■□□□ 1.49
PTCHD3P2-201ENST00000424937 FGFBP2Q9BYJ0 223 aa24.37■■□□□ 1.49
PTCHD3P2-201ENST00000424937 GOLGA2P5Q9HBQ8 144 aa24.37■■□□□ 1.49
PTCHD3P2-201ENST00000424937 CNTN3Q9P232 1028 aa24.37■■□□□ 1.49
PTCHD3P2-201ENST00000424937 IRAK3Q9Y616 596 aa24.37■■□□□ 1.49
PTCHD3P2-201ENST00000424937 SF3B1O75533 1304 aaKnown RBP eCLIP24.36■■□□□ 1.49
PTCHD3P2-201ENST00000424937 ANKRD63C9JTQ0 380 aa24.36■■□□□ 1.49
PTCHD3P2-201ENST00000424937 C2CD2LO14523 706 aa24.36■■□□□ 1.49
PTCHD3P2-201ENST00000424937 OGTO15294 1046 aa24.36■■□□□ 1.49
PTCHD3P2-201ENST00000424937 MEFVO15553 781 aaPredicted RBP24.36■■□□□ 1.49
PTCHD3P2-201ENST00000424937 CLASP2O75122 1294 aaKnown RBP24.36■■□□□ 1.49
PTCHD3P2-201ENST00000424937 CLTAP09496 248 aa24.36■■□□□ 1.49
PTCHD3P2-201ENST00000424937 SRGAP2BP0DMP2 458 aa24.36■■□□□ 1.49
PTCHD3P2-201ENST00000424937 CMA1P23946 247 aa24.36■■□□□ 1.49
PTCHD3P2-201ENST00000424937 TNFSF9P41273 254 aa24.36■■□□□ 1.49
PTCHD3P2-201ENST00000424937 AFMP43652 599 aa24.36■■□□□ 1.49
PTCHD3P2-201ENST00000424937 GLUD2P49448 558 aa24.36■■□□□ 1.49
PTCHD3P2-201ENST00000424937 KYAT1Q16773 422 aa24.36■■□□□ 1.49
PTCHD3P2-201ENST00000424937 SLC10A6Q3KNW5 377 aa24.36■■□□□ 1.49
PTCHD3P2-201ENST00000424937 ZBTB41Q5SVQ8 909 aa24.36■■□□□ 1.49
PTCHD3P2-201ENST00000424937 TAS1R1Q7RTX1 841 aa24.36■■□□□ 1.49
PTCHD3P2-201ENST00000424937 RNF168Q8IYW5 571 aaPredicted RBP24.36■■□□□ 1.49
PTCHD3P2-201ENST00000424937 ACCSQ96QU6 501 aa24.36■■□□□ 1.49
PTCHD3P2-201ENST00000424937 GPR62Q9BZJ7 368 aa24.36■■□□□ 1.49
PTCHD3P2-201ENST00000424937 IKZF4Q9H2S9 585 aa24.36■■□□□ 1.49
PTCHD3P2-201ENST00000424937 MRPL17Q9NRX2 175 aaKnown RBP24.36■■□□□ 1.49
PTCHD3P2-201ENST00000424937 SLC38A7Q9NVC3 462 aa24.36■■□□□ 1.49
PTCHD3P2-201ENST00000424937 SERTAD1Q9UHV2 236 aa24.36■■□□□ 1.49
PTCHD3P2-201ENST00000424937 CD207Q9UJ71 328 aa24.36■■□□□ 1.49
PTCHD3P2-201ENST00000424937 EXOC7Q9UPT5 735 aa24.36■■□□□ 1.49
PTCHD3P2-201ENST00000424937 VCANP13611 3396 aa24.36■■□□□ 1.49
PTCHD3P2-201ENST00000424937 A0A0B4J269 797 aa24.35■■□□□ 1.49
PTCHD3P2-201ENST00000424937 DLL1O00548 723 aa24.35■■□□□ 1.49
PTCHD3P2-201ENST00000424937 KCNE1P15382 129 aa24.35■■□□□ 1.49
PTCHD3P2-201ENST00000424937 CASP1P29466 404 aa24.35■■□□□ 1.49
PTCHD3P2-201ENST00000424937 SOX4Q06945 474 aaPredicted RBP24.35■■□□□ 1.49
PTCHD3P2-201ENST00000424937 KCNA1Q09470 495 aa24.35■■□□□ 1.49
PTCHD3P2-201ENST00000424937 ALCAMQ13740 583 aa24.35■■□□□ 1.49
PTCHD3P2-201ENST00000424937 HPS3Q969F9 1004 aa24.35■■□□□ 1.49
PTCHD3P2-201ENST00000424937 B3GALT6Q96L58 329 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms