RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 ATP2C1P98194 919 aaPredicted RBP17.79■□□□□ 0.44
DDR1-234ENST00000424544 DCAF4L1Q3SXM0 396 aa17.79■□□□□ 0.44
DDR1-234ENST00000424544 RILPL1Q5EBL4 403 aa17.79■□□□□ 0.44
DDR1-234ENST00000424544 DTHD1Q6ZMT9 781 aa17.79■□□□□ 0.44
DDR1-234ENST00000424544 TAS1R3Q7RTX0 852 aa17.79■□□□□ 0.44
DDR1-234ENST00000424544 SUGP1Q8IWZ8 645 aaKnown RBP17.79■□□□□ 0.44
DDR1-234ENST00000424544 KCTD17Q8N5Z5 321 aa17.79■□□□□ 0.44
DDR1-234ENST00000424544 LNX1Q8TBB1 728 aaPredicted RBP17.79■□□□□ 0.44
DDR1-234ENST00000424544 SNX29Q8TEQ0 813 aa17.79■□□□□ 0.44
DDR1-234ENST00000424544 RIN2Q8WYP3 895 aaPredicted RBP17.79■□□□□ 0.44
DDR1-234ENST00000424544 PPP1R10Q96QC0 940 aaKnown RBP17.79■□□□□ 0.44
DDR1-234ENST00000424544 NT5C3AQ9H0P0 336 aa17.79■□□□□ 0.44
DDR1-234ENST00000424544 ARHGAP28Q9P2N2 729 aa17.79■□□□□ 0.44
DDR1-234ENST00000424544 MTMR6Q9Y217 621 aa17.79■□□□□ 0.44
DDR1-234ENST00000424544 KMT2EQ8IZD2 1858 aa17.78■□□□□ 0.44
DDR1-234ENST00000424544 CASTOR2A6NHX0 329 aa17.78■□□□□ 0.44
DDR1-234ENST00000424544 K7ERI5 159 aa17.78■□□□□ 0.44
DDR1-234ENST00000424544 ABLIM1O14639 778 aa17.78■□□□□ 0.44
DDR1-234ENST00000424544 SPATA31D3P0C874 917 aa17.78■□□□□ 0.44
DDR1-234ENST00000424544 NUBP1P53384 320 aa17.78■□□□□ 0.44
DDR1-234ENST00000424544 ATF7IP2Q5U623 682 aa17.78■□□□□ 0.44
DDR1-234ENST00000424544 KRT79Q5XKE5 535 aa17.78■□□□□ 0.44
DDR1-234ENST00000424544 SPATA31D4Q6ZUB0 917 aa17.78■□□□□ 0.44
DDR1-234ENST00000424544 ALYREFQ86V81 257 aaKnown RBP17.78■□□□□ 0.44
DDR1-234ENST00000424544 PALB2Q86YC2 1186 aa17.78■□□□□ 0.44
DDR1-234ENST00000424544 PIK3R5Q8WYR1 880 aa17.78■□□□□ 0.44
DDR1-234ENST00000424544 ACSF2Q96CM8 615 aaPredicted RBP17.78■□□□□ 0.44
DDR1-234ENST00000424544 ACO2Q99798 780 aaKnown RBP17.78■□□□□ 0.44
DDR1-234ENST00000424544 CLSTN3Q9BQT9 956 aa17.78■□□□□ 0.44
DDR1-234ENST00000424544 ADPGKQ9BRR6 497 aa17.78■□□□□ 0.44
DDR1-234ENST00000424544 RUSC1Q9BVN2 902 aa17.78■□□□□ 0.44
DDR1-234ENST00000424544 C17orf75Q9HAS0 396 aa17.78■□□□□ 0.44
DDR1-234ENST00000424544 KCNK12Q9HB15 430 aa17.78■□□□□ 0.44
DDR1-234ENST00000424544 CHMP5Q9NZZ3 219 aa17.78■□□□□ 0.44
DDR1-234ENST00000424544 SF3B1O75533 1304 aaKnown RBP eCLIP17.77■□□□□ 0.443e-6■■■■■ 137.9
DDR1-234ENST00000424544 TMEM189-UBE2V1I3L0A0 370 aa17.77■□□□□ 0.44
DDR1-234ENST00000424544 KIF4AO95239 1232 aa17.77■□□□□ 0.44
DDR1-234ENST00000424544 PROZP22891 400 aa17.77■□□□□ 0.44
DDR1-234ENST00000424544 PEX3P56589 373 aa17.77■□□□□ 0.44
DDR1-234ENST00000424544 MCTP1Q6DN14 999 aa17.77■□□□□ 0.44
DDR1-234ENST00000424544 PRSS55Q6UWB4 352 aaPredicted RBP17.77■□□□□ 0.44
DDR1-234ENST00000424544 ZBTB33Q86T24 672 aa17.77■□□□□ 0.44
DDR1-234ENST00000424544 PNMA5Q96PV4 448 aa17.77■□□□□ 0.44
DDR1-234ENST00000424544 TTPALQ9BTX7 342 aa17.77■□□□□ 0.44
DDR1-234ENST00000424544 ZDHHC7Q9NXF8 308 aa17.77■□□□□ 0.44
DDR1-234ENST00000424544 DOCK8Q8NF50 2099 aa17.76■□□□□ 0.43
DDR1-234ENST00000424544 HIP1RO75146 1068 aa17.76■□□□□ 0.43
DDR1-234ENST00000424544 ZSCAN22P10073 491 aaPredicted RBP17.76■□□□□ 0.43
DDR1-234ENST00000424544 RPL17P18621 184 aaKnown RBP17.76■□□□□ 0.43
DDR1-234ENST00000424544 FGFR3P22607 806 aa17.76■□□□□ 0.43
DDR1-234ENST00000424544 GUCY2CP25092 1073 aa17.76■□□□□ 0.43
DDR1-234ENST00000424544 MRE11P49959 708 aa17.76■□□□□ 0.43
DDR1-234ENST00000424544 PTPN5P54829 565 aa17.76■□□□□ 0.43
DDR1-234ENST00000424544 CREMQ03060 361 aa17.76■□□□□ 0.43
DDR1-234ENST00000424544 TDGQ13569 410 aa17.76■□□□□ 0.43
DDR1-234ENST00000424544 PKP1Q13835 747 aa17.76■□□□□ 0.43
DDR1-234ENST00000424544 FAM171A1Q5VUB5 890 aa17.76■□□□□ 0.43
DDR1-234ENST00000424544 DCLRE1AQ6PJP8 1040 aa17.76■□□□□ 0.43
DDR1-234ENST00000424544 KCNN1Q92952 543 aa17.76■□□□□ 0.43
DDR1-234ENST00000424544 PRKD2Q9BZL6 878 aa17.76■□□□□ 0.43
DDR1-234ENST00000424544 IGSF9Q9P2J2 1179 aa17.76■□□□□ 0.43
DDR1-234ENST00000424544 EPS15L1Q9UBC2 864 aa17.76■□□□□ 0.43
DDR1-234ENST00000424544 GDAQ9Y2T3 454 aa17.76■□□□□ 0.43
DDR1-234ENST00000424544 TRIP11Q15643 1979 aa17.76■□□□□ 0.43
DDR1-234ENST00000424544 DOCK6Q96HP0 2047 aa17.76■□□□□ 0.43
DDR1-234ENST00000424544 SMIM28A0A1B0GU29 152 aa17.75■□□□□ 0.43
DDR1-234ENST00000424544 ZMYND10O75800 440 aa17.75■□□□□ 0.43
DDR1-234ENST00000424544 LIG1P18858 919 aa17.75■□□□□ 0.43
DDR1-234ENST00000424544 GRM5P41594 1212 aa17.75■□□□□ 0.43
DDR1-234ENST00000424544 ELAVL2Q12926 359 aaKnown RBP17.75■□□□□ 0.43
DDR1-234ENST00000424544 UPP1Q16831 310 aa17.75■□□□□ 0.43
DDR1-234ENST00000424544 ARL6IP4Q66PJ3 421 aaKnown RBP17.75■□□□□ 0.43
DDR1-234ENST00000424544 ELMSAN1Q6PJG2 1045 aa17.75■□□□□ 0.43
DDR1-234ENST00000424544 SYT2Q8N9I0 419 aaPredicted RBP17.75■□□□□ 0.43
DDR1-234ENST00000424544 SPIRE2Q8WWL2 714 aa17.75■□□□□ 0.43
DDR1-234ENST00000424544 TIPINQ9BVW5 301 aa17.75■□□□□ 0.43
DDR1-234ENST00000424544 CDT1Q9H211 546 aa17.75■□□□□ 0.43
DDR1-234ENST00000424544 ZSCAN16Q9H4T2 348 aaPredicted RBP17.75■□□□□ 0.43
DDR1-234ENST00000424544 FBXW11Q9UKB1 542 aa17.75■□□□□ 0.43
DDR1-234ENST00000424544 ZDHHC9Q9Y397 364 aa17.75■□□□□ 0.43
DDR1-234ENST00000424544 CCDC169A6NNP5 214 aa17.74■□□□□ 0.43
DDR1-234ENST00000424544 SFI1A8K8P3 1242 aa17.74■□□□□ 0.43
DDR1-234ENST00000424544 MEFVO15553 781 aaPredicted RBP17.74■□□□□ 0.43
DDR1-234ENST00000424544 ADAM12O43184 909 aa17.74■□□□□ 0.43
DDR1-234ENST00000424544 MYBP10242 640 aa17.74■□□□□ 0.43
DDR1-234ENST00000424544 DMP1Q13316 513 aaPredicted RBP17.74■□□□□ 0.43
DDR1-234ENST00000424544 RAB33AQ14088 237 aa17.74■□□□□ 0.43
DDR1-234ENST00000424544 FOXD4L5Q5VV16 416 aaPredicted RBP17.74■□□□□ 0.43
DDR1-234ENST00000424544 CEP120Q8N960 986 aa17.74■□□□□ 0.43
DDR1-234ENST00000424544 HASPINQ8TF76 798 aa17.74■□□□□ 0.43
DDR1-234ENST00000424544 FOXD4L4Q8WXT5 416 aaPredicted RBP17.74■□□□□ 0.43
DDR1-234ENST00000424544 SMG7Q92540 1137 aaKnown RBP17.74■□□□□ 0.43
DDR1-234ENST00000424544 STAMQ92783 540 aa17.74■□□□□ 0.43
DDR1-234ENST00000424544 DRC1Q96MC2 740 aa17.74■□□□□ 0.43
DDR1-234ENST00000424544 ZMAT2Q96NC0 199 aaKnown RBP17.74■□□□□ 0.43
DDR1-234ENST00000424544 MYADMQ96S97 322 aa17.74■□□□□ 0.43
DDR1-234ENST00000424544 PHOX2BQ99453 314 aa17.74■□□□□ 0.43
DDR1-234ENST00000424544 TARS2Q9BW92 718 aaKnown RBP17.74■□□□□ 0.43
DDR1-234ENST00000424544 MRPL4Q9BYD3 311 aaKnown RBP17.74■□□□□ 0.43
DDR1-234ENST00000424544 DUSP12Q9UNI6 340 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms