RNA–Protein interactions for RNA: ENST00000424463.4

VPS8-204, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS8, Length 2,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-204ENST00000424463 HACL1Q9UJ83 578 aa9.13□□□□□ -0.95
VPS8-204ENST00000424463 PRKAB1Q9Y478 270 aa9.13□□□□□ -0.95
VPS8-204ENST00000424463 CD2APQ9Y5K6 639 aa9.13□□□□□ -0.95
VPS8-204ENST00000424463 KIF13BQ9NQT8 1826 aa9.13□□□□□ -0.95
VPS8-204ENST00000424463 ZNF541Q9H0D2 1346 aa9.13□□□□□ -0.95
VPS8-204ENST00000424463 KCNJ18B7U540 433 aa9.13□□□□□ -0.95
VPS8-204ENST00000424463 E9PMD0 336 aa9.13□□□□□ -0.95
VPS8-204ENST00000424463 FZD9O00144 591 aa9.13□□□□□ -0.95
VPS8-204ENST00000424463 MYO1FO00160 1098 aa9.13□□□□□ -0.95
VPS8-204ENST00000424463 SLU7O95391 586 aaKnown RBP9.13□□□□□ -0.95
VPS8-204ENST00000424463 SLC4A1P02730 911 aa9.13□□□□□ -0.95
VPS8-204ENST00000424463 SSBP05455 408 aaKnown RBP eCLIP9.13□□□□□ -0.95
VPS8-204ENST00000424463 GLI1P08151 1106 aa9.13□□□□□ -0.95
VPS8-204ENST00000424463 ASNSP08243 561 aa9.13□□□□□ -0.95
VPS8-204ENST00000424463 VARSP26640 1264 aaKnown RBP9.13□□□□□ -0.95
VPS8-204ENST00000424463 CHKAP35790 457 aa9.13□□□□□ -0.95
VPS8-204ENST00000424463 GABREP78334 506 aa9.13□□□□□ -0.95
VPS8-204ENST00000424463 ACTN3Q08043 901 aaPredicted RBP9.13□□□□□ -0.95
VPS8-204ENST00000424463 KLHL30Q0D2K2 578 aa9.13□□□□□ -0.95
VPS8-204ENST00000424463 AP3B2Q13367 1082 aa9.13□□□□□ -0.95
VPS8-204ENST00000424463 KCNJ12Q14500 433 aa9.13□□□□□ -0.95
VPS8-204ENST00000424463 TCP11X2Q5H9J9 407 aa9.13□□□□□ -0.95
VPS8-204ENST00000424463 ODR4Q5SWX8 454 aa9.13□□□□□ -0.95
VPS8-204ENST00000424463 TMTC4Q5T4D3 741 aa9.13□□□□□ -0.95
VPS8-204ENST00000424463 NBPF12Q5TAG4 269 aaPredicted RBP9.13□□□□□ -0.95
VPS8-204ENST00000424463 ANKRD40Q6AI12 368 aa9.13□□□□□ -0.95
VPS8-204ENST00000424463 APLFQ8IW19 511 aaPredicted RBP9.13□□□□□ -0.95
VPS8-204ENST00000424463 TC2NQ8N9U0 490 aa9.13□□□□□ -0.95
VPS8-204ENST00000424463 ETNPPLQ8TBG4 499 aa9.13□□□□□ -0.95
VPS8-204ENST00000424463 CHURC1Q8WUH1 139 aa9.13□□□□□ -0.95
VPS8-204ENST00000424463 LENG9Q96B70 501 aa9.13□□□□□ -0.95
VPS8-204ENST00000424463 OPTNQ96CV9 577 aa9.13□□□□□ -0.95
VPS8-204ENST00000424463 EGLN2Q96KS0 407 aa9.13□□□□□ -0.95
VPS8-204ENST00000424463 MBOAT7Q96N66 472 aa9.13□□□□□ -0.95
VPS8-204ENST00000424463 DEFB129Q9H1M3 183 aa9.13□□□□□ -0.95
VPS8-204ENST00000424463 CUEDC1Q9NWM3 386 aaPredicted RBP9.13□□□□□ -0.95
VPS8-204ENST00000424463 KIAA1024Q9UPX6 916 aa9.13□□□□□ -0.95
VPS8-204ENST00000424463 TRIM17Q9Y577 477 aa9.13□□□□□ -0.95
VPS8-204ENST00000424463 SMCHD1A6NHR9 2005 aa9.12□□□□□ -0.95
VPS8-204ENST00000424463 NPHP3-ACAD11A0A0J9YXS1 232 aa9.12□□□□□ -0.95
VPS8-204ENST00000424463 POTEB3A0JP26 581 aa9.12□□□□□ -0.95
VPS8-204ENST00000424463 LACTBL1A8MY62 500 aa9.12□□□□□ -0.95
VPS8-204ENST00000424463 POTECB2RU33 542 aa9.12□□□□□ -0.95
VPS8-204ENST00000424463 N4BP3O15049 544 aa9.12□□□□□ -0.95
VPS8-204ENST00000424463 MGRN1O60291 552 aa9.12□□□□□ -0.95
VPS8-204ENST00000424463 SREBF1P36956 1147 aa9.12□□□□□ -0.95
VPS8-204ENST00000424463 CD97P48960 835 aa9.12□□□□□ -0.95
VPS8-204ENST00000424463 RBL2Q08999 1139 aa9.12□□□□□ -0.95
VPS8-204ENST00000424463 PRKG1Q13976 671 aa9.12□□□□□ -0.95
VPS8-204ENST00000424463 CCDC38Q502W7 563 aa9.12□□□□□ -0.95
VPS8-204ENST00000424463 NEK5Q6P3R8 708 aa9.12□□□□□ -0.95
VPS8-204ENST00000424463 POTEBQ6S5H4 581 aa9.12□□□□□ -0.95
VPS8-204ENST00000424463 CAPN12Q6ZSI9 719 aa9.12□□□□□ -0.95
VPS8-204ENST00000424463 TMEM139Q8IV31 216 aa9.12□□□□□ -0.95
VPS8-204ENST00000424463 KIAA0895Q8NCT3 520 aa9.12□□□□□ -0.95
VPS8-204ENST00000424463 GLIS3Q8NEA6 775 aa9.12□□□□□ -0.95
VPS8-204ENST00000424463 RNF25Q96BH1 459 aaPredicted RBP9.12□□□□□ -0.95
VPS8-204ENST00000424463 FAM20AQ96MK3 541 aa9.12□□□□□ -0.95
VPS8-204ENST00000424463 APBA2Q99767 749 aa9.12□□□□□ -0.95
VPS8-204ENST00000424463 MTMR12Q9C0I1 747 aa9.12□□□□□ -0.95
VPS8-204ENST00000424463 SCHIP1Q9P0W5 487 aaPredicted RBP9.12□□□□□ -0.95
VPS8-204ENST00000424463 STK17AQ9UEE5 414 aa9.12□□□□□ -0.95
VPS8-204ENST00000424463 LIMA1Q9UHB6 759 aaKnown RBP9.12□□□□□ -0.95
VPS8-204ENST00000424463 MYH7BA7E2Y1 1941 aa9.12□□□□□ -0.95
VPS8-204ENST00000424463 CCDC169A6NNP5 214 aa9.12□□□□□ -0.95
VPS8-204ENST00000424463 H7C1D1 291 aa9.12□□□□□ -0.95
VPS8-204ENST00000424463 MEIS1O00470 390 aa9.12□□□□□ -0.95
VPS8-204ENST00000424463 PSMA7O14818 248 aa9.12□□□□□ -0.95
VPS8-204ENST00000424463 WDR46O15213 610 aaKnown RBP9.12□□□□□ -0.95
VPS8-204ENST00000424463 MSH4O15457 936 aa9.12□□□□□ -0.95
VPS8-204ENST00000424463 PRMT3O60678 531 aa9.12□□□□□ -0.95
VPS8-204ENST00000424463 MED24O75448 989 aa9.12□□□□□ -0.95
VPS8-204ENST00000424463 RPS12P25398 132 aaKnown RBP9.12□□□□□ -0.95
VPS8-204ENST00000424463 ZNF76P36508 570 aa9.12□□□□□ -0.95
VPS8-204ENST00000424463 PBX1P40424 430 aa9.12□□□□□ -0.95
VPS8-204ENST00000424463 COPB1P53618 953 aaKnown RBP9.12□□□□□ -0.95
VPS8-204ENST00000424463 PSMC6P62333 389 aa9.12□□□□□ -0.95
VPS8-204ENST00000424463 LRRC41Q15345 812 aa9.12□□□□□ -0.95
VPS8-204ENST00000424463 WDR45BQ5MNZ6 344 aa9.12□□□□□ -0.95
VPS8-204ENST00000424463 TTI2Q6NXR4 508 aa9.12□□□□□ -0.95
VPS8-204ENST00000424463 CORO6Q6QEF8 472 aa9.12□□□□□ -0.95
VPS8-204ENST00000424463 FAM228AQ86W67 206 aa9.12□□□□□ -0.95
VPS8-204ENST00000424463 LDHDQ86WU2 507 aa9.12□□□□□ -0.95
VPS8-204ENST00000424463 CCDC50Q8IVM0 306 aa9.12□□□□□ -0.95
VPS8-204ENST00000424463 SPARTQ8N0X7 666 aa9.12□□□□□ -0.95
VPS8-204ENST00000424463 PPP1R14CQ8TAE6 165 aa9.12□□□□□ -0.95
VPS8-204ENST00000424463 MAIP1Q8WWC4 291 aa9.12□□□□□ -0.95
VPS8-204ENST00000424463 FUT8Q9BYC5 575 aa9.12□□□□□ -0.95
VPS8-204ENST00000424463 SMARCAD1Q9H4L7 1026 aa9.12□□□□□ -0.95
VPS8-204ENST00000424463 ATPIF1Q9UII2 106 aa9.12□□□□□ -0.95
VPS8-204ENST00000424463 ZNF148Q9UQR1 794 aa9.12□□□□□ -0.95
VPS8-204ENST00000424463 ASB3Q9Y575 518 aa9.12□□□□□ -0.95
VPS8-204ENST00000424463 H3BQF6 201 aa9.11□□□□□ -0.95
VPS8-204ENST00000424463 RNF225M0QZC1 329 aaPredicted RBP9.11□□□□□ -0.95
VPS8-204ENST00000424463 MCF2LO15068 1137 aa9.11□□□□□ -0.95
VPS8-204ENST00000424463 NKRFO15226 690 aaKnown RBP eCLIP9.11□□□□□ -0.95
VPS8-204ENST00000424463 NCK2O43639 380 aa9.11□□□□□ -0.95
VPS8-204ENST00000424463 TMOD1P28289 359 aa9.11□□□□□ -0.95
VPS8-204ENST00000424463 CACNB1Q02641 598 aaPredicted RBP9.11□□□□□ -0.95
VPS8-204ENST00000424463 SPIRE1Q08AE8 756 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms