RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 KLHL23Q8NBE8 558 aa27.66■■■□□ 2.02
TSPAN3-203ENST00000424443 GDPD5Q8WTR4 605 aa27.66■■■□□ 2.02
TSPAN3-203ENST00000424443 SAAL1Q96ER3 474 aa27.66■■■□□ 2.02
TSPAN3-203ENST00000424443 TMEM175Q9BSA9 504 aa27.66■■■□□ 2.02
TSPAN3-203ENST00000424443 AGPAT3Q9NRZ7 376 aa27.66■■■□□ 2.02
TSPAN3-203ENST00000424443 MTMR10Q9NXD2 777 aa27.66■■■□□ 2.02
TSPAN3-203ENST00000424443 DNAJB4Q9UDY4 337 aa27.66■■■□□ 2.02
TSPAN3-203ENST00000424443 CPSF3Q9UKF6 684 aaKnown RBP27.66■■■□□ 2.02
TSPAN3-203ENST00000424443 RFXAPO00287 272 aa27.65■■■□□ 2.02
TSPAN3-203ENST00000424443 TGFB1I1O43294 461 aa27.65■■■□□ 2.02
TSPAN3-203ENST00000424443 FAM189A1O60320 539 aa27.65■■■□□ 2.02
TSPAN3-203ENST00000424443 PBX3P40426 434 aa27.65■■■□□ 2.02
TSPAN3-203ENST00000424443 OR1G1P47890 313 aa27.65■■■□□ 2.02
TSPAN3-203ENST00000424443 ZBTB41Q5SVQ8 909 aa27.65■■■□□ 2.02
TSPAN3-203ENST00000424443 GUF1Q8N442 669 aaKnown RBP27.65■■■□□ 2.02
TSPAN3-203ENST00000424443 FAM213AQ9BRX8 229 aa27.65■■■□□ 2.02
TSPAN3-203ENST00000424443 NUP62CLQ9H1M0 184 aa27.65■■■□□ 2.02
TSPAN3-203ENST00000424443 CLSTN2Q9H4D0 955 aa27.65■■■□□ 2.02
TSPAN3-203ENST00000424443 SLC38A7Q9NVC3 462 aa27.65■■■□□ 2.02
TSPAN3-203ENST00000424443 SPG21Q9NZD8 308 aa27.65■■■□□ 2.02
TSPAN3-203ENST00000424443 CNTN3Q9P232 1028 aa27.65■■■□□ 2.02
TSPAN3-203ENST00000424443 PLAGL2Q9UPG8 496 aa27.65■■■□□ 2.02
TSPAN3-203ENST00000424443 FAN1Q9Y2M0 1017 aa27.65■■■□□ 2.02
TSPAN3-203ENST00000424443 SMIM28A0A1B0GU29 152 aa27.64■■■□□ 2.02
TSPAN3-203ENST00000424443 EPOPA6NHQ4 379 aa27.64■■■□□ 2.02
TSPAN3-203ENST00000424443 NT5C1B-RDH14C9J2C7 533 aa27.64■■■□□ 2.02
TSPAN3-203ENST00000424443 CLIC2O15247 247 aa27.64■■■□□ 2.02
TSPAN3-203ENST00000424443 GALTP07902 379 aa27.64■■■□□ 2.02
TSPAN3-203ENST00000424443 KRT17Q04695 432 aa27.64■■■□□ 2.02
TSPAN3-203ENST00000424443 TUSC3Q13454 348 aa27.64■■■□□ 2.02
TSPAN3-203ENST00000424443 HSP90AA2PQ14568 343 aaPredicted RBP27.64■■■□□ 2.02
TSPAN3-203ENST00000424443 ENOX2Q16206 610 aaKnown RBP27.64■■■□□ 2.02
TSPAN3-203ENST00000424443 ISM2Q6H9L7 571 aa27.64■■■□□ 2.02
TSPAN3-203ENST00000424443 ALKAL1Q6UXT8 129 aa27.64■■■□□ 2.02
TSPAN3-203ENST00000424443 CD302Q8IX05 232 aa27.64■■■□□ 2.02
TSPAN3-203ENST00000424443 GPD1LQ8N335 351 aa27.64■■■□□ 2.02
TSPAN3-203ENST00000424443 CDX2Q99626 313 aaPredicted RBP27.64■■■□□ 2.02
TSPAN3-203ENST00000424443 HSPBP1Q9NZL4 362 aa27.64■■■□□ 2.02
TSPAN3-203ENST00000424443 MYO9BQ13459 2157 aa27.64■■■□□ 2.01
TSPAN3-203ENST00000424443 EXTL3O43909 919 aa27.63■■■□□ 2.01
TSPAN3-203ENST00000424443 FGF18O76093 207 aa27.63■■■□□ 2.01
TSPAN3-203ENST00000424443 MBD3O95983 291 aa27.63■■■□□ 2.01
TSPAN3-203ENST00000424443 XKR4Q5GH76 650 aa27.63■■■□□ 2.01
TSPAN3-203ENST00000424443 COLGALT2Q8IYK4 626 aa27.63■■■□□ 2.01
TSPAN3-203ENST00000424443 SMYD4Q8IYR2 804 aaPredicted RBP27.63■■■□□ 2.01
TSPAN3-203ENST00000424443 TMEM169Q96HH4 297 aa27.63■■■□□ 2.01
TSPAN3-203ENST00000424443 CXCL16Q9H2A7 254 aa27.63■■■□□ 2.01
TSPAN3-203ENST00000424443 MAN1B1Q9UKM7 699 aa27.63■■■□□ 2.01
TSPAN3-203ENST00000424443 GOLGA8IPA6NC78 632 aa27.62■■■□□ 2.01
TSPAN3-203ENST00000424443 GOLGA8JA6NMD2 632 aa27.62■■■□□ 2.01
TSPAN3-203ENST00000424443 PDXKO00764 312 aa27.62■■■□□ 2.01
TSPAN3-203ENST00000424443 CALUO43852 315 aaPredicted RBP27.62■■■□□ 2.01
TSPAN3-203ENST00000424443 KCNE1P15382 129 aa27.62■■■□□ 2.01
TSPAN3-203ENST00000424443 IGFBP4P22692 258 aa27.62■■■□□ 2.01
TSPAN3-203ENST00000424443 SLC11A1P49279 550 aa27.62■■■□□ 2.01
TSPAN3-203ENST00000424443 CYP2J2P51589 502 aa27.62■■■□□ 2.01
TSPAN3-203ENST00000424443 POU5F1Q01860 360 aaKnown RBP27.62■■■□□ 2.01
TSPAN3-203ENST00000424443 DSC1Q08554 894 aa27.62■■■□□ 2.01
TSPAN3-203ENST00000424443 STIM1Q13586 685 aa27.62■■■□□ 2.01
TSPAN3-203ENST00000424443 PPP1R10Q96QC0 940 aaKnown RBP27.62■■■□□ 2.01
TSPAN3-203ENST00000424443 KIAA1586Q9HCI6 787 aa27.62■■■□□ 2.01
TSPAN3-203ENST00000424443 ALG13Q9NP73 1137 aaKnown RBP27.62■■■□□ 2.01
TSPAN3-203ENST00000424443 KIAA1468Q9P260 1216 aa27.62■■■□□ 2.01
TSPAN3-203ENST00000424443 PUF60Q9UHX1 559 aaKnown RBP27.62■■■□□ 2.01
TSPAN3-203ENST00000424443 TTC26A0AVF1 554 aa27.62■■■□□ 2.01
TSPAN3-203ENST00000424443 LACTBL1A8MY62 500 aa27.62■■■□□ 2.01
TSPAN3-203ENST00000424443 NRP1O14786 923 aa27.62■■■□□ 2.01
TSPAN3-203ENST00000424443 MCM4P33991 863 aa27.62■■■□□ 2.01
TSPAN3-203ENST00000424443 SLC39A11Q8N1S5 342 aa27.62■■■□□ 2.01
TSPAN3-203ENST00000424443 GPT2Q8TD30 523 aa27.62■■■□□ 2.01
TSPAN3-203ENST00000424443 MYLIPQ8WY64 445 aa27.62■■■□□ 2.01
TSPAN3-203ENST00000424443 KIF12Q96FN5 646 aa27.62■■■□□ 2.01
TSPAN3-203ENST00000424443 KCTD10Q9H3F6 313 aa27.62■■■□□ 2.01
TSPAN3-203ENST00000424443 PRG3Q9Y2Y8 225 aaPredicted RBP27.62■■■□□ 2.01
TSPAN3-203ENST00000424443 TRIP11Q15643 1979 aa27.61■■■□□ 2.01
TSPAN3-203ENST00000424443 CASTOR2A6NHX0 329 aa27.61■■■□□ 2.01
TSPAN3-203ENST00000424443 BIN1O00499 593 aa27.61■■■□□ 2.01
TSPAN3-203ENST00000424443 XPOTO43592 962 aaKnown RBP27.61■■■□□ 2.01
TSPAN3-203ENST00000424443 B4GALT3O60512 393 aa27.61■■■□□ 2.01
TSPAN3-203ENST00000424443 ITGB1P05556 798 aa27.61■■■□□ 2.01
TSPAN3-203ENST00000424443 PTPROQ16827 1216 aa27.61■■■□□ 2.01
TSPAN3-203ENST00000424443 CRELD2Q6UXH1 353 aaPredicted RBP27.61■■■□□ 2.01
TSPAN3-203ENST00000424443 XXYLT1Q8NBI6 393 aa27.61■■■□□ 2.01
TSPAN3-203ENST00000424443 GUCD1Q96NT3 240 aa27.61■■■□□ 2.01
TSPAN3-203ENST00000424443 TSPAN18Q96SJ8 248 aa27.61■■■□□ 2.01
TSPAN3-203ENST00000424443 COLEC11Q9BWP8 271 aa27.61■■■□□ 2.01
TSPAN3-203ENST00000424443 RBAKQ9NYW8 714 aaPredicted RBP27.61■■■□□ 2.01
TSPAN3-203ENST00000424443 ZNF233A6NK53 670 aa27.6■■■□□ 2.01
TSPAN3-203ENST00000424443 IL18RAPO95256 599 aa27.6■■■□□ 2.01
TSPAN3-203ENST00000424443 C12orf56Q8IXR9 622 aa27.6■■■□□ 2.01
TSPAN3-203ENST00000424443 ZMAT2Q96NC0 199 aaKnown RBP27.6■■■□□ 2.01
TSPAN3-203ENST00000424443 LMAN2LQ9H0V9 348 aa27.6■■■□□ 2.01
TSPAN3-203ENST00000424443 ASB7Q9H672 318 aa27.6■■■□□ 2.01
TSPAN3-203ENST00000424443 EXOC3O60645 756 aa27.59■■■□□ 2.01
TSPAN3-203ENST00000424443 FOSL2P15408 326 aa27.59■■■□□ 2.01
TSPAN3-203ENST00000424443 PPP1R2P41236 205 aa27.59■■■□□ 2.01
TSPAN3-203ENST00000424443 PRCPP42785 496 aa27.59■■■□□ 2.01
TSPAN3-203ENST00000424443 PLCB3Q01970 1234 aa27.59■■■□□ 2.01
TSPAN3-203ENST00000424443 UBE3AQ05086 875 aa27.59■■■□□ 2.01
TSPAN3-203ENST00000424443 SPAG1Q07617 926 aa27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms