RNA–Protein interactions for RNA: ENST00000424393.5

TOP3B-203, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 824 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-203ENST00000424393 SNX27Q96L92 541 aa11.95□□□□□ -0.5
TOP3B-203ENST00000424393 VN1R3Q9BXE9 311 aa11.95□□□□□ -0.5
TOP3B-203ENST00000424393 NSUN3Q9H649 340 aaKnown RBP11.95□□□□□ -0.5
TOP3B-203ENST00000424393 TLR9Q9NR96 1032 aa11.95□□□□□ -0.5
TOP3B-203ENST00000424393 MARCH5Q9NX47 278 aa11.95□□□□□ -0.5
TOP3B-203ENST00000424393 CHMP5Q9NZZ3 219 aa11.95□□□□□ -0.5
TOP3B-203ENST00000424393 CACNG4Q9UBN1 327 aa11.95□□□□□ -0.5
TOP3B-203ENST00000424393 USP25Q9UHP3 1055 aa11.95□□□□□ -0.5
TOP3B-203ENST00000424393 PRG3Q9Y2Y8 225 aaPredicted RBP11.95□□□□□ -0.5
TOP3B-203ENST00000424393 MYO7AQ13402 2215 aa11.95□□□□□ -0.5
TOP3B-203ENST00000424393 A0A0B4J269 797 aa11.94□□□□□ -0.5
TOP3B-203ENST00000424393 CARNS1A5YM72 827 aa11.94□□□□□ -0.5
TOP3B-203ENST00000424393 KLRC4O43908 158 aa11.94□□□□□ -0.5
TOP3B-203ENST00000424393 PRPF6O94906 941 aaKnown RBP11.94□□□□□ -0.5
TOP3B-203ENST00000424393 ALDH2P05091 517 aa11.94□□□□□ -0.5
TOP3B-203ENST00000424393 THP07101 528 aa11.94□□□□□ -0.5
TOP3B-203ENST00000424393 PRR29P0C7W0 189 aa11.94□□□□□ -0.5
TOP3B-203ENST00000424393 BMP1P13497 986 aa11.94□□□□□ -0.5
TOP3B-203ENST00000424393 HOXD11P31277 338 aaPredicted RBP11.94□□□□□ -0.5
TOP3B-203ENST00000424393 TNFSF9P41273 254 aa11.94□□□□□ -0.5
TOP3B-203ENST00000424393 MATR3P43243 847 aaKnown RBP eCLIP11.94□□□□□ -0.59e-6■■□□□ 12
TOP3B-203ENST00000424393 OR1G1P47890 313 aa11.94□□□□□ -0.5
TOP3B-203ENST00000424393 YARSP54577 528 aaKnown RBP11.94□□□□□ -0.5
TOP3B-203ENST00000424393 KRT17Q04695 432 aa11.94□□□□□ -0.5
TOP3B-203ENST00000424393 TUSC3Q13454 348 aa11.94□□□□□ -0.5
TOP3B-203ENST00000424393 SLC10A6Q3KNW5 377 aa11.94□□□□□ -0.5
TOP3B-203ENST00000424393 GLRA4Q5JXX5 417 aa11.94□□□□□ -0.5
TOP3B-203ENST00000424393 FAM26FQ5R3K3 315 aa11.94□□□□□ -0.5
TOP3B-203ENST00000424393 ZBTB41Q5SVQ8 909 aa11.94□□□□□ -0.5
TOP3B-203ENST00000424393 KRBA2Q6ZNG9 492 aa11.94□□□□□ -0.5
TOP3B-203ENST00000424393 ADGRD2Q7Z7M1 963 aa11.94□□□□□ -0.5
TOP3B-203ENST00000424393 TMEM169Q96HH4 297 aa11.94□□□□□ -0.5
TOP3B-203ENST00000424393 ACAP3Q96P50 834 aa11.94□□□□□ -0.5
TOP3B-203ENST00000424393 PPP1R10Q96QC0 940 aaKnown RBP11.94□□□□□ -0.5
TOP3B-203ENST00000424393 ACCSQ96QU6 501 aa11.94□□□□□ -0.5
TOP3B-203ENST00000424393 LRFN3Q9BTN0 628 aa11.94□□□□□ -0.5
TOP3B-203ENST00000424393 TOPORSQ9NS56 1045 aaPredicted RBP11.94□□□□□ -0.5
TOP3B-203ENST00000424393 FAN1Q9Y2M0 1017 aa11.94□□□□□ -0.5
TOP3B-203ENST00000424393 PCDHB13Q9Y5F0 798 aa11.94□□□□□ -0.5
TOP3B-203ENST00000424393 STYXL1Q9Y6J8 313 aa11.94□□□□□ -0.5
TOP3B-203ENST00000424393 ANK1P16157 1881 aa11.93□□□□□ -0.5
TOP3B-203ENST00000424393 SMIM28A0A1B0GU29 152 aa11.93□□□□□ -0.5
TOP3B-203ENST00000424393 PVALEFA0A1B0GWK0 134 aa11.93□□□□□ -0.5
TOP3B-203ENST00000424393 OGTO15294 1046 aa11.93□□□□□ -0.5
TOP3B-203ENST00000424393 ZNF202O95125 648 aa11.93□□□□□ -0.5
TOP3B-203ENST00000424393 EFEMP2O95967 443 aa11.93□□□□□ -0.5
TOP3B-203ENST00000424393 CXCL8P10145 99 aa11.93□□□□□ -0.5
TOP3B-203ENST00000424393 ADSSP30520 456 aa11.93□□□□□ -0.5
TOP3B-203ENST00000424393 GTF2F1P35269 517 aaKnown RBP eCLIP11.93□□□□□ -0.5
TOP3B-203ENST00000424393 SOX4Q06945 474 aaPredicted RBP11.93□□□□□ -0.5
TOP3B-203ENST00000424393 HYAL1Q12794 435 aa11.93□□□□□ -0.5
TOP3B-203ENST00000424393 ALCAMQ13740 583 aa11.93□□□□□ -0.5
TOP3B-203ENST00000424393 PLPP4Q5VZY2 271 aa11.93□□□□□ -0.5
TOP3B-203ENST00000424393 EPM2AIP1Q7L775 607 aaPredicted RBP11.93□□□□□ -0.5
TOP3B-203ENST00000424393 DDX53Q86TM3 631 aaKnown RBP11.93□□□□□ -0.5
TOP3B-203ENST00000424393 FMR1NBQ8N0W7 255 aaPredicted RBP11.93□□□□□ -0.5
TOP3B-203ENST00000424393 ENGASEQ8NFI3 743 aa11.93□□□□□ -0.5
TOP3B-203ENST00000424393 RABGGTAQ92696 567 aa11.93□□□□□ -0.5
TOP3B-203ENST00000424393 ZMAT2Q96NC0 199 aaKnown RBP11.93□□□□□ -0.5
TOP3B-203ENST00000424393 TCF25Q9BQ70 676 aa11.93□□□□□ -0.5
TOP3B-203ENST00000424393 PAAF1Q9BRP4 392 aa11.93□□□□□ -0.5
TOP3B-203ENST00000424393 MSTO1Q9BUK6 570 aa11.93□□□□□ -0.5
TOP3B-203ENST00000424393 ZBP1Q9H171 429 aa11.93□□□□□ -0.5
TOP3B-203ENST00000424393 EPHX3Q9H6B9 360 aa11.93□□□□□ -0.5
TOP3B-203ENST00000424393 CNTN3Q9P232 1028 aa11.93□□□□□ -0.5
TOP3B-203ENST00000424393 PUF60Q9UHX1 559 aaKnown RBP11.93□□□□□ -0.5
TOP3B-203ENST00000424393 COG5Q9UP83 839 aa11.93□□□□□ -0.5
TOP3B-203ENST00000424393 GOLGA6L4A6NEF3 574 aa11.92□□□□□ -0.5
TOP3B-203ENST00000424393 CASTOR2A6NHX0 329 aa11.92□□□□□ -0.5
TOP3B-203ENST00000424393 HIDE1A8MVS5 230 aa11.92□□□□□ -0.5
TOP3B-203ENST00000424393 CLTAP09496 248 aa11.92□□□□□ -0.5
TOP3B-203ENST00000424393 KCNE1P15382 129 aa11.92□□□□□ -0.5
TOP3B-203ENST00000424393 HOXD13P35453 343 aa11.92□□□□□ -0.5
TOP3B-203ENST00000424393 SNW1Q13573 536 aaKnown RBP11.92□□□□□ -0.5
TOP3B-203ENST00000424393 COL19A1Q14993 1142 aa11.92□□□□□ -0.5
TOP3B-203ENST00000424393 ENOX2Q16206 610 aaKnown RBP11.92□□□□□ -0.5
TOP3B-203ENST00000424393 SLFN12LQ6IEE8 588 aa11.92□□□□□ -0.5
TOP3B-203ENST00000424393 TMC7Q7Z402 723 aa11.92□□□□□ -0.5
TOP3B-203ENST00000424393 RNF168Q8IYW5 571 aaPredicted RBP11.92□□□□□ -0.5
TOP3B-203ENST00000424393 VPS52Q8N1B4 723 aa11.92□□□□□ -0.5
TOP3B-203ENST00000424393 ZNF507Q8TCN5 953 aa11.92□□□□□ -0.5
TOP3B-203ENST00000424393 MICAL1Q8TDZ2 1067 aa11.92□□□□□ -0.5
TOP3B-203ENST00000424393 COLEC11Q9BWP8 271 aa11.92□□□□□ -0.5
TOP3B-203ENST00000424393 GOLGA2P5Q9HBQ8 144 aa11.92□□□□□ -0.5
TOP3B-203ENST00000424393 SLC39A2Q9NP94 309 aa11.92□□□□□ -0.5
TOP3B-203ENST00000424393 ENTPD7Q9NQZ7 604 aa11.92□□□□□ -0.5
TOP3B-203ENST00000424393 TSHZ2Q9NRE2 1034 aa11.92□□□□□ -0.5
TOP3B-203ENST00000424393 CPSF3Q9UKF6 684 aaKnown RBP11.92□□□□□ -0.5
TOP3B-203ENST00000424393 EXOC7Q9UPT5 735 aa11.92□□□□□ -0.5
TOP3B-203ENST00000424393 TTC26A0AVF1 554 aa11.91□□□□□ -0.5
TOP3B-203ENST00000424393 FAM86C2PA6NEL3 165 aa11.91□□□□□ -0.5
TOP3B-203ENST00000424393 EIF3DO15371 548 aaKnown RBP eCLIP11.91□□□□□ -0.5
TOP3B-203ENST00000424393 LINC01565O15544 149 aa11.91□□□□□ -0.5
TOP3B-203ENST00000424393 GADD45BO75293 160 aaPredicted RBP11.91□□□□□ -0.5
TOP3B-203ENST00000424393 NR1I2O75469 434 aa11.91□□□□□ -0.5
TOP3B-203ENST00000424393 KIF4AO95239 1232 aa11.91□□□□□ -0.5
TOP3B-203ENST00000424393 MYL1P05976 194 aa11.91□□□□□ -0.5
TOP3B-203ENST00000424393 ADRB2P07550 413 aa11.91□□□□□ -0.5
TOP3B-203ENST00000424393 CTSAP10619 480 aa11.91□□□□□ -0.5
TOP3B-203ENST00000424393 IGFBP6P24592 240 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms