RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 KCNN1Q92952 543 aa11.97□□□□□ -0.49
USP49-204ENST00000423567 DHX58Q96C10 678 aa11.97□□□□□ -0.49
USP49-204ENST00000423567 SPATA32Q96LK8 384 aa11.97□□□□□ -0.49
USP49-204ENST00000423567 COL25A1Q9BXS0 654 aaPredicted RBP11.97□□□□□ -0.49
USP49-204ENST00000423567 TNMDQ9H2S6 317 aa11.97□□□□□ -0.49
USP49-204ENST00000423567 MRPL44Q9H9J2 332 aaKnown RBP11.97□□□□□ -0.49
USP49-204ENST00000423567 SLC38A7Q9NVC3 462 aa11.97□□□□□ -0.49
USP49-204ENST00000423567 RCOR1Q9UKL0 485 aa11.97□□□□□ -0.49
USP49-204ENST00000423567 PCDHA7Q9UN72 937 aa11.97□□□□□ -0.49
USP49-204ENST00000423567 SSX2IPQ9Y2D8 614 aa11.97□□□□□ -0.49
USP49-204ENST00000423567 A0A087X0B3 334 aa11.96□□□□□ -0.49
USP49-204ENST00000423567 C2orf71A6NGG8 1288 aa11.96□□□□□ -0.49
USP49-204ENST00000423567 CASTOR2A6NHX0 329 aa11.96□□□□□ -0.49
USP49-204ENST00000423567 MYMKA6NI61 221 aa11.96□□□□□ -0.49
USP49-204ENST00000423567 TADA2AO75478 443 aa11.96□□□□□ -0.49
USP49-204ENST00000423567 SOD2P04179 222 aa11.96□□□□□ -0.49
USP49-204ENST00000423567 BMP1P13497 986 aa11.96□□□□□ -0.49
USP49-204ENST00000423567 NMT1P30419 496 aaKnown RBP11.96□□□□□ -0.49
USP49-204ENST00000423567 GTF2BQ00403 316 aa11.96□□□□□ -0.49
USP49-204ENST00000423567 HSP90AA2PQ14568 343 aaPredicted RBP11.96□□□□□ -0.49
USP49-204ENST00000423567 HERC4Q5GLZ8 1057 aaPredicted RBP11.96□□□□□ -0.49
USP49-204ENST00000423567 PTCRAQ6ISU1 281 aaPredicted RBP11.96□□□□□ -0.49
USP49-204ENST00000423567 SHC4Q6S5L8 630 aa11.96□□□□□ -0.49
USP49-204ENST00000423567 MAP4K3Q8IVH8 894 aa11.96□□□□□ -0.49
USP49-204ENST00000423567 CCDC65Q8IXS2 484 aa11.96□□□□□ -0.49
USP49-204ENST00000423567 CEP120Q8N960 986 aa11.96□□□□□ -0.49
USP49-204ENST00000423567 BCL7CQ8WUZ0 217 aaPredicted RBP11.96□□□□□ -0.49
USP49-204ENST00000423567 HVCN1Q96D96 273 aa11.96□□□□□ -0.49
USP49-204ENST00000423567 ZBTB45Q96K62 511 aaPredicted RBP11.96□□□□□ -0.49
USP49-204ENST00000423567 UHRF1Q96T88 793 aaPredicted RBP11.96□□□□□ -0.49
USP49-204ENST00000423567 HERC2P3Q9BVR0 1158 aa11.96□□□□□ -0.49
USP49-204ENST00000423567 EMILIN2Q9BXX0 1053 aa11.96□□□□□ -0.49
USP49-204ENST00000423567 SCAND2PQ9GZW5 306 aaPredicted RBP11.96□□□□□ -0.49
USP49-204ENST00000423567 ST6GALNAC4Q9H4F1 302 aa11.96□□□□□ -0.49
USP49-204ENST00000423567 MAGEF1Q9HAY2 307 aa11.96□□□□□ -0.49
USP49-204ENST00000423567 MRPL17Q9NRX2 175 aaKnown RBP11.96□□□□□ -0.49
USP49-204ENST00000423567 PANK4Q9NVE7 773 aa11.96□□□□□ -0.49
USP49-204ENST00000423567 MARCH5Q9NX47 278 aa11.96□□□□□ -0.49
USP49-204ENST00000423567 CD207Q9UJ71 328 aa11.96□□□□□ -0.49
USP49-204ENST00000423567 ADAM28Q9UKQ2 775 aa11.96□□□□□ -0.49
USP49-204ENST00000423567 EXOC7Q9UPT5 735 aa11.96□□□□□ -0.49
USP49-204ENST00000423567 IRAK3Q9Y616 596 aa11.96□□□□□ -0.49
USP49-204ENST00000423567 SF3B1O75533 1304 aaKnown RBP eCLIP11.95□□□□□ -0.54e-7■■■■■ 133.7
USP49-204ENST00000423567 PTGESO14684 152 aa11.95□□□□□ -0.5
USP49-204ENST00000423567 POLR2DO15514 142 aaKnown RBP11.95□□□□□ -0.5
USP49-204ENST00000423567 LINC01565O15544 149 aa11.95□□□□□ -0.5
USP49-204ENST00000423567 TBX10O75333 385 aa11.95□□□□□ -0.5
USP49-204ENST00000423567 CLTAP09496 248 aa11.95□□□□□ -0.5
USP49-204ENST00000423567 LTBRP36941 435 aa11.95□□□□□ -0.5
USP49-204ENST00000423567 GLUD2P49448 558 aa11.95□□□□□ -0.5
USP49-204ENST00000423567 ASIC1P78348 528 aa11.95□□□□□ -0.5
USP49-204ENST00000423567 NUCB2P80303 420 aa11.95□□□□□ -0.5
USP49-204ENST00000423567 MCL1Q07820 350 aa11.95□□□□□ -0.5
USP49-204ENST00000423567 ELAVL2Q12926 359 aaKnown RBP11.95□□□□□ -0.5
USP49-204ENST00000423567 ALCAMQ13740 583 aa11.95□□□□□ -0.5
USP49-204ENST00000423567 CLUL1Q15846 466 aa11.95□□□□□ -0.5
USP49-204ENST00000423567 GLRA4Q5JXX5 417 aa11.95□□□□□ -0.5
USP49-204ENST00000423567 RESP18Q5W5W9 173 aa11.95□□□□□ -0.5
USP49-204ENST00000423567 SLFN12LQ6IEE8 588 aa11.95□□□□□ -0.5
USP49-204ENST00000423567 LLGL2Q6P1M3 1020 aa11.95□□□□□ -0.5
USP49-204ENST00000423567 STXBP4Q6ZWJ1 553 aa11.95□□□□□ -0.5
USP49-204ENST00000423567 ZNF720Q7Z2F6 126 aa11.95□□□□□ -0.5
USP49-204ENST00000423567 PPFIBP1Q86W92 1011 aa11.95□□□□□ -0.5
USP49-204ENST00000423567 CEP57L1Q8IYX8 460 aa11.95□□□□□ -0.5
USP49-204ENST00000423567 AUTS2Q8WXX7 1259 aa11.95□□□□□ -0.5
USP49-204ENST00000423567 CASP10Q92851 521 aa11.95□□□□□ -0.5
USP49-204ENST00000423567 DNAJC19Q96DA6 116 aa11.95□□□□□ -0.5
USP49-204ENST00000423567 SNX27Q96L92 541 aa11.95□□□□□ -0.5
USP49-204ENST00000423567 UROC1Q96N76 676 aa11.95□□□□□ -0.5
USP49-204ENST00000423567 MSTO1Q9BUK6 570 aa11.95□□□□□ -0.5
USP49-204ENST00000423567 ZDHHC9Q9Y397 364 aa11.95□□□□□ -0.5
USP49-204ENST00000423567 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.95□□□□□ -0.5
USP49-204ENST00000423567 EYSQ5T1H1 3165 aa11.94□□□□□ -0.5
USP49-204ENST00000423567 SMIM28A0A1B0GU29 152 aa11.94□□□□□ -0.5
USP49-204ENST00000423567 GRXCR2A6NFK2 248 aa11.94□□□□□ -0.5
USP49-204ENST00000423567 C2CD2LO14523 706 aa11.94□□□□□ -0.5
USP49-204ENST00000423567 ABLIM1O14639 778 aa11.94□□□□□ -0.5
USP49-204ENST00000423567 GCNT3O95395 438 aa11.94□□□□□ -0.5
USP49-204ENST00000423567 PIGRP01833 764 aa11.94□□□□□ -0.5
USP49-204ENST00000423567 HOXB3P14651 431 aaPredicted RBP11.94□□□□□ -0.5
USP49-204ENST00000423567 CREMQ03060 361 aa11.94□□□□□ -0.5
USP49-204ENST00000423567 PPP2R3AQ06190 1150 aa11.94□□□□□ -0.5
USP49-204ENST00000423567 DLX2Q07687 328 aaPredicted RBP11.94□□□□□ -0.5
USP49-204ENST00000423567 SMAD4Q13485 552 aaKnown RBP11.94□□□□□ -0.5
USP49-204ENST00000423567 PTPN14Q15678 1187 aa11.94□□□□□ -0.5
USP49-204ENST00000423567 E2F4Q16254 413 aa11.94□□□□□ -0.5
USP49-204ENST00000423567 USP41Q3LFD5 358 aa11.94□□□□□ -0.5
USP49-204ENST00000423567 ZC2HC1CQ53FD0 456 aaPredicted RBP11.94□□□□□ -0.5
USP49-204ENST00000423567 ADALQ6DHV7 355 aa11.94□□□□□ -0.5
USP49-204ENST00000423567 FUT10Q6P4F1 479 aa11.94□□□□□ -0.5
USP49-204ENST00000423567 ELMSAN1Q6PJG2 1045 aa11.94□□□□□ -0.5
USP49-204ENST00000423567 SYCP3Q8IZU3 236 aa11.94□□□□□ -0.5
USP49-204ENST00000423567 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.94□□□□□ -0.5
USP49-204ENST00000423567 LEO1Q8WVC0 666 aaPredicted RBP11.94□□□□□ -0.5
USP49-204ENST00000423567 STAMQ92783 540 aa11.94□□□□□ -0.5
USP49-204ENST00000423567 DDX27Q96GQ7 796 aaKnown RBP11.94□□□□□ -0.5
USP49-204ENST00000423567 PPP1R10Q96QC0 940 aaKnown RBP11.94□□□□□ -0.5
USP49-204ENST00000423567 ACCSQ96QU6 501 aa11.94□□□□□ -0.5
USP49-204ENST00000423567 FIZ1Q96SL8 496 aa11.94□□□□□ -0.5
USP49-204ENST00000423567 VN1R3Q9BXE9 311 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms