RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 PP2D1A8MPX8 630 aa20.33■□□□□ 0.85
SREBF1-206ENST00000423161 E9PMD0 336 aa20.33■□□□□ 0.85
SREBF1-206ENST00000423161 H0Y858 1186 aa20.33■□□□□ 0.85
SREBF1-206ENST00000423161 K7ERI5 159 aa20.33■□□□□ 0.85
SREBF1-206ENST00000423161 LAD1O00515 517 aa20.33■□□□□ 0.85
SREBF1-206ENST00000423161 ZMYND10O75800 440 aa20.33■□□□□ 0.85
SREBF1-206ENST00000423161 GLRA4Q5JXX5 417 aa20.33■□□□□ 0.85
SREBF1-206ENST00000423161 KRT79Q5XKE5 535 aa20.33■□□□□ 0.85
SREBF1-206ENST00000423161 ATOH1Q92858 354 aaPredicted RBP20.33■□□□□ 0.85
SREBF1-206ENST00000423161 MYADMQ96S97 322 aa20.33■□□□□ 0.85
SREBF1-206ENST00000423161 EPS15L1Q9UBC2 864 aa20.33■□□□□ 0.85
SREBF1-206ENST00000423161 DAXXQ9UER7 740 aaPredicted RBP20.33■□□□□ 0.85
SREBF1-206ENST00000423161 FBXL21Q9UKT6 434 aa20.33■□□□□ 0.85
SREBF1-206ENST00000423161 DNM3Q9UQ16 869 aa20.33■□□□□ 0.85
SREBF1-206ENST00000423161 KIF3AQ9Y496 699 aa20.33■□□□□ 0.85
SREBF1-206ENST00000423161 MYH15Q9Y2K3 1946 aa20.32■□□□□ 0.84
SREBF1-206ENST00000423161 CCDC169A6NNP5 214 aa20.32■□□□□ 0.84
SREBF1-206ENST00000423161 HIP1RO75146 1068 aa20.32■□□□□ 0.84
SREBF1-206ENST00000423161 PRPHP41219 470 aa20.32■□□□□ 0.84
SREBF1-206ENST00000423161 PEX3P56589 373 aa20.32■□□□□ 0.84
SREBF1-206ENST00000423161 MCTP1Q6DN14 999 aa20.32■□□□□ 0.84
SREBF1-206ENST00000423161 DAW1Q8N136 415 aa20.32■□□□□ 0.84
SREBF1-206ENST00000423161 FLCNQ8NFG4 579 aa20.32■□□□□ 0.84
SREBF1-206ENST00000423161 LNX1Q8TBB1 728 aaPredicted RBP20.32■□□□□ 0.84
SREBF1-206ENST00000423161 RSAD2Q8WXG1 361 aa20.32■□□□□ 0.84
SREBF1-206ENST00000423161 CLSTN3Q9BQT9 956 aa20.32■□□□□ 0.84
SREBF1-206ENST00000423161 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.32■□□□□ 0.84
SREBF1-206ENST00000423161 FBXW11Q9UKB1 542 aa20.32■□□□□ 0.84
SREBF1-206ENST00000423161 TNFSF13BQ9Y275 285 aa20.32■□□□□ 0.84
SREBF1-206ENST00000423161 NARSO43776 548 aaKnown RBP20.31■□□□□ 0.84
SREBF1-206ENST00000423161 CDC25AP30304 524 aa20.31■□□□□ 0.84
SREBF1-206ENST00000423161 NPTX2P47972 431 aa20.31■□□□□ 0.84
SREBF1-206ENST00000423161 CLCN5P51795 746 aa20.31■□□□□ 0.84
SREBF1-206ENST00000423161 DMP1Q13316 513 aaPredicted RBP20.31■□□□□ 0.84
SREBF1-206ENST00000423161 RABEP1Q15276 862 aa20.31■□□□□ 0.84
SREBF1-206ENST00000423161 IL17AQ16552 155 aa20.31■□□□□ 0.84
SREBF1-206ENST00000423161 CWF19L1Q69YN2 538 aaKnown RBP20.31■□□□□ 0.84
SREBF1-206ENST00000423161 PDXDC1Q6P996 788 aa20.31■□□□□ 0.84
SREBF1-206ENST00000423161 DTHD1Q6ZMT9 781 aa20.31■□□□□ 0.84
SREBF1-206ENST00000423161 GET4Q7L5D6 327 aaPredicted RBP20.31■□□□□ 0.84
SREBF1-206ENST00000423161 DRC1Q96MC2 740 aa20.31■□□□□ 0.84
SREBF1-206ENST00000423161 PPP1R10Q96QC0 940 aaKnown RBP20.31■□□□□ 0.84
SREBF1-206ENST00000423161 RUSC1Q9BVN2 902 aa20.31■□□□□ 0.84
SREBF1-206ENST00000423161 TMEM189-UBE2V1I3L0A0 370 aa20.3■□□□□ 0.84
SREBF1-206ENST00000423161 ST18O60284 1047 aa20.3■□□□□ 0.84
SREBF1-206ENST00000423161 CENPBP07199 599 aaPredicted RBP20.3■□□□□ 0.84
SREBF1-206ENST00000423161 ZNF568Q3ZCX4 644 aa20.3■□□□□ 0.84
SREBF1-206ENST00000423161 LIN9Q5TKA1 542 aa20.3■□□□□ 0.84
SREBF1-206ENST00000423161 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.3■□□□□ 0.84
SREBF1-206ENST00000423161 SIX5Q8N196 739 aa20.3■□□□□ 0.84
SREBF1-206ENST00000423161 CEP120Q8N960 986 aa20.3■□□□□ 0.84
SREBF1-206ENST00000423161 ACO2Q99798 780 aaKnown RBP20.3■□□□□ 0.84
SREBF1-206ENST00000423161 MMTAG2Q9BU76 263 aaKnown RBP20.3■□□□□ 0.84
SREBF1-206ENST00000423161 CCDC94Q9BW85 323 aaPredicted RBP20.3■□□□□ 0.84
SREBF1-206ENST00000423161 CDT1Q9H211 546 aa20.3■□□□□ 0.84
SREBF1-206ENST00000423161 TMEM134Q9H6X4 195 aa20.3■□□□□ 0.84
SREBF1-206ENST00000423161 KMT5AQ9NQR1 393 aa20.3■□□□□ 0.84
SREBF1-206ENST00000423161 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.3■□□□□ 0.842e-6■■■□□ 17.8
SREBF1-206ENST00000423161 ARHGAP28Q9P2N2 729 aa20.3■□□□□ 0.84
SREBF1-206ENST00000423161 ADAM12O43184 909 aa20.29■□□□□ 0.84
SREBF1-206ENST00000423161 B3GAT3O94766 335 aa20.29■□□□□ 0.84
SREBF1-206ENST00000423161 GRM5P41594 1212 aa20.29■□□□□ 0.84
SREBF1-206ENST00000423161 CLCNKBP51801 687 aa20.29■□□□□ 0.84
SREBF1-206ENST00000423161 YARSP54577 528 aaKnown RBP20.29■□□□□ 0.84
SREBF1-206ENST00000423161 MAPK7Q13164 816 aa20.29■□□□□ 0.84
SREBF1-206ENST00000423161 PPM1LQ5SGD2 360 aa20.29■□□□□ 0.84
SREBF1-206ENST00000423161 RINT1Q6NUQ1 792 aa20.29■□□□□ 0.84
SREBF1-206ENST00000423161 TAS1R3Q7RTX0 852 aa20.29■□□□□ 0.84
SREBF1-206ENST00000423161 KCNK18Q7Z418 384 aa20.29■□□□□ 0.84
SREBF1-206ENST00000423161 NXPE3Q969Y0 559 aa20.29■□□□□ 0.84
SREBF1-206ENST00000423161 UROC1Q96N76 676 aa20.29■□□□□ 0.84
SREBF1-206ENST00000423161 MRPL4Q9BYD3 311 aaKnown RBP20.29■□□□□ 0.84
SREBF1-206ENST00000423161 GOLGA2P5Q9HBQ8 144 aa20.29■□□□□ 0.84
SREBF1-206ENST00000423161 TOPORSQ9NS56 1045 aaPredicted RBP20.29■□□□□ 0.84
SREBF1-206ENST00000423161 NOTCH4Q99466 2003 aa20.29■□□□□ 0.84
SREBF1-206ENST00000423161 C8AP07357 584 aa20.28■□□□□ 0.84
SREBF1-206ENST00000423161 CFHP08603 1231 aa20.28■□□□□ 0.84
SREBF1-206ENST00000423161 HNRNPA1P09651 372 aaKnown RBP eCLIP20.28■□□□□ 0.84
SREBF1-206ENST00000423161 LAMP2P13473 410 aa20.28■□□□□ 0.84
SREBF1-206ENST00000423161 NPR3P17342 541 aa20.28■□□□□ 0.84
SREBF1-206ENST00000423161 FGFR3P22607 806 aa20.28■□□□□ 0.84
SREBF1-206ENST00000423161 IGFBP6P24592 240 aaPredicted RBP20.28■□□□□ 0.84
SREBF1-206ENST00000423161 OSTNP61366 133 aa20.28■□□□□ 0.84
SREBF1-206ENST00000423161 ZRSR1Q15695 479 aaKnown RBP20.28■□□□□ 0.84
SREBF1-206ENST00000423161 RILPL1Q5EBL4 403 aa20.28■□□□□ 0.84
SREBF1-206ENST00000423161 DCLRE1AQ6PJP8 1040 aa20.28■□□□□ 0.84
SREBF1-206ENST00000423161 C1orf186Q6ZWK4 172 aa20.28■□□□□ 0.84
SREBF1-206ENST00000423161 GRASPQ7Z6J2 395 aaPredicted RBP20.28■□□□□ 0.84
SREBF1-206ENST00000423161 SLC44A3Q8N4M1 653 aa20.28■□□□□ 0.84
SREBF1-206ENST00000423161 TARS2Q9BW92 718 aaKnown RBP20.28■□□□□ 0.84
SREBF1-206ENST00000423161 RBM19Q9Y4C8 960 aaKnown RBP20.28■□□□□ 0.84
SREBF1-206ENST00000423161 ZFHX2Q9C0A1 2572 aaPredicted RBP20.27■□□□□ 0.84
SREBF1-206ENST00000423161 SMIM28A0A1B0GU29 152 aa20.27■□□□□ 0.84
SREBF1-206ENST00000423161 SLC16A4O15374 487 aa20.27■□□□□ 0.84
SREBF1-206ENST00000423161 AOC1P19801 751 aa20.27■□□□□ 0.84
SREBF1-206ENST00000423161 FSHRP23945 695 aa20.27■□□□□ 0.84
SREBF1-206ENST00000423161 OR1D2P34982 312 aa20.27■□□□□ 0.84
SREBF1-206ENST00000423161 ATP2C1P98194 919 aaPredicted RBP20.27■□□□□ 0.84
SREBF1-206ENST00000423161 UPP1Q16831 310 aa20.27■□□□□ 0.84
SREBF1-206ENST00000423161 C3orf58Q8NDZ4 430 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms