RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 ALKAL1Q6UXT8 129 aa18.49■□□□□ 0.55
COL7A1-202ENST00000422991 LRRC55Q6ZSA7 311 aa18.49■□□□□ 0.55
COL7A1-202ENST00000422991 C11orf57Q6ZUT1 292 aaPredicted RBP18.49■□□□□ 0.55
COL7A1-202ENST00000422991 CBWD2Q8IUF1 395 aa18.49■□□□□ 0.55
COL7A1-202ENST00000422991 BRSK2Q8IWQ3 736 aa18.49■□□□□ 0.55
COL7A1-202ENST00000422991 ABI1Q8IZP0 508 aa18.49■□□□□ 0.55
COL7A1-202ENST00000422991 DEFB123Q8N688 67 aa18.49■□□□□ 0.55
COL7A1-202ENST00000422991 NOC3LQ8WTT2 800 aaKnown RBP18.49■□□□□ 0.55
COL7A1-202ENST00000422991 MED15Q96RN5 788 aa18.49■□□□□ 0.55
COL7A1-202ENST00000422991 YME1L1Q96TA2 773 aa18.49■□□□□ 0.55
COL7A1-202ENST00000422991 RAD9AQ99638 391 aa18.49■□□□□ 0.55
COL7A1-202ENST00000422991 DUSP9Q99956 384 aaKnown RBP18.49■□□□□ 0.55
COL7A1-202ENST00000422991 ZBED2Q9BTP6 218 aa18.49■□□□□ 0.55
COL7A1-202ENST00000422991 CXCL16Q9H2A7 254 aa18.49■□□□□ 0.55
COL7A1-202ENST00000422991 RPF1Q9H9Y2 349 aaKnown RBP18.49■□□□□ 0.55
COL7A1-202ENST00000422991 INPP5FQ9Y2H2 1132 aa18.49■□□□□ 0.55
COL7A1-202ENST00000422991 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.48■□□□□ 0.55
COL7A1-202ENST00000422991 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.48■□□□□ 0.55
COL7A1-202ENST00000422991 TTC26A0AVF1 554 aa18.48■□□□□ 0.55
COL7A1-202ENST00000422991 TBKBP1A7MCY6 615 aa18.48■□□□□ 0.55
COL7A1-202ENST00000422991 PTGESO14684 152 aa18.48■□□□□ 0.55
COL7A1-202ENST00000422991 TLL1O43897 1013 aa18.48■□□□□ 0.55
COL7A1-202ENST00000422991 CCDC192P0DO97 292 aa18.48■□□□□ 0.55
COL7A1-202ENST00000422991 ERCC5P28715 1186 aaPredicted RBP18.48■□□□□ 0.55
COL7A1-202ENST00000422991 CASP4P49662 377 aa18.48■□□□□ 0.55
COL7A1-202ENST00000422991 SCNN1GP51170 649 aa18.48■□□□□ 0.55
COL7A1-202ENST00000422991 AFF1P51825 1210 aaKnown RBP18.48■□□□□ 0.55
COL7A1-202ENST00000422991 RABGGTBP53611 331 aa18.48■□□□□ 0.55
COL7A1-202ENST00000422991 PPP2R3AQ06190 1150 aa18.48■□□□□ 0.55
COL7A1-202ENST00000422991 ADAM9Q13443 819 aa18.48■□□□□ 0.55
COL7A1-202ENST00000422991 CMTR2Q8IYT2 770 aaKnown RBP18.48■□□□□ 0.55
COL7A1-202ENST00000422991 GSTCDQ8NEC7 633 aa18.48■□□□□ 0.55
COL7A1-202ENST00000422991 URGCPQ8TCY9 931 aa18.48■□□□□ 0.55
COL7A1-202ENST00000422991 SP7Q8TDD2 431 aaPredicted RBP18.48■□□□□ 0.55
COL7A1-202ENST00000422991 RPS6KC1Q96S38 1066 aa18.48■□□□□ 0.55
COL7A1-202ENST00000422991 PLEKHA5Q9HAU0 1116 aa18.48■□□□□ 0.55
COL7A1-202ENST00000422991 RBAKQ9NYW8 714 aaPredicted RBP18.48■□□□□ 0.55
COL7A1-202ENST00000422991 CNTN3Q9P232 1028 aa18.48■□□□□ 0.55
COL7A1-202ENST00000422991 INSL6Q9Y581 213 aa18.48■□□□□ 0.55
COL7A1-202ENST00000422991 NLRC5Q86WI3 1866 aa18.48■□□□□ 0.55
COL7A1-202ENST00000422991 ZNF233A6NK53 670 aa18.47■□□□□ 0.55
COL7A1-202ENST00000422991 LACTBL1A8MY62 500 aa18.47■□□□□ 0.55
COL7A1-202ENST00000422991 KCNE1P15382 129 aa18.47■□□□□ 0.55
COL7A1-202ENST00000422991 FKBP3Q00688 224 aaKnown RBP18.47■□□□□ 0.55
COL7A1-202ENST00000422991 PAN2Q504Q3 1202 aaKnown RBP18.47■□□□□ 0.55
COL7A1-202ENST00000422991 LRRC43Q8N309 656 aa18.47■□□□□ 0.55
COL7A1-202ENST00000422991 MRPL9Q9BYD2 267 aaKnown RBP18.47■□□□□ 0.55
COL7A1-202ENST00000422991 DNAJC25Q9H1X3 360 aa18.47■□□□□ 0.55
COL7A1-202ENST00000422991 TBC1D13Q9NVG8 400 aa18.47■□□□□ 0.55
COL7A1-202ENST00000422991 PLAGL2Q9UPG8 496 aa18.47■□□□□ 0.55
COL7A1-202ENST00000422991 PCDHA11Q9Y5I1 949 aa18.47■□□□□ 0.55
COL7A1-202ENST00000422991 LCHNA4D1U4 455 aa18.46■□□□□ 0.55
COL7A1-202ENST00000422991 CETN3O15182 167 aa18.46■□□□□ 0.55
COL7A1-202ENST00000422991 MAPK13O15264 365 aa18.46■□□□□ 0.55
COL7A1-202ENST00000422991 AKAP3O75969 853 aa18.46■□□□□ 0.55
COL7A1-202ENST00000422991 IL18RAPO95256 599 aa18.46■□□□□ 0.55
COL7A1-202ENST00000422991 WNT7BP56706 349 aa18.46■□□□□ 0.55
COL7A1-202ENST00000422991 CYP24A1Q07973 514 aa18.46■□□□□ 0.55
COL7A1-202ENST00000422991 GRIK3Q13003 919 aa18.46■□□□□ 0.55
COL7A1-202ENST00000422991 BTG3Q14201 252 aaPredicted RBP18.46■□□□□ 0.55
COL7A1-202ENST00000422991 ANO6Q4KMQ2 910 aa18.46■□□□□ 0.55
COL7A1-202ENST00000422991 CEP135Q66GS9 1140 aa18.46■□□□□ 0.55
COL7A1-202ENST00000422991 Q7L0L9 218 aa18.46■□□□□ 0.55
COL7A1-202ENST00000422991 CD302Q8IX05 232 aa18.46■□□□□ 0.55
COL7A1-202ENST00000422991 CSGALNACT2Q8N6G5 542 aa18.46■□□□□ 0.55
COL7A1-202ENST00000422991 RDH13Q8NBN7 331 aa18.46■□□□□ 0.55
COL7A1-202ENST00000422991 EEF2KMTQ96G04 330 aa18.46■□□□□ 0.55
COL7A1-202ENST00000422991 CEP63Q96MT8 703 aa18.46■□□□□ 0.55
COL7A1-202ENST00000422991 ZMAT2Q96NC0 199 aaKnown RBP18.46■□□□□ 0.55
COL7A1-202ENST00000422991 PPP1R10Q96QC0 940 aaKnown RBP18.46■□□□□ 0.55
COL7A1-202ENST00000422991 MKNK1Q9BUB5 465 aa18.46■□□□□ 0.55
COL7A1-202ENST00000422991 MIOSQ9NXC5 875 aa18.46■□□□□ 0.55
COL7A1-202ENST00000422991 FRMD4BQ9Y2L6 1034 aa18.46■□□□□ 0.55
COL7A1-202ENST00000422991 SMIM28A0A1B0GU29 152 aa18.45■□□□□ 0.54
COL7A1-202ENST00000422991 SLC16A3O15427 465 aaKnown RBP18.45■□□□□ 0.54
COL7A1-202ENST00000422991 POMCP01189 267 aa18.45■□□□□ 0.54
COL7A1-202ENST00000422991 MYOGP15173 224 aa18.45■□□□□ 0.54
COL7A1-202ENST00000422991 NAB2Q15742 525 aa18.45■□□□□ 0.54
COL7A1-202ENST00000422991 RAB30Q15771 203 aa18.45■□□□□ 0.54
COL7A1-202ENST00000422991 GLRA4Q5JXX5 417 aa18.45■□□□□ 0.54
COL7A1-202ENST00000422991 FAM186BQ8IYM0 893 aa18.45■□□□□ 0.54
COL7A1-202ENST00000422991 FAM212AQ96EL1 285 aa18.45■□□□□ 0.54
COL7A1-202ENST00000422991 MFSD14AQ96MC6 490 aa18.45■□□□□ 0.54
COL7A1-202ENST00000422991 PBX4Q9BYU1 374 aa18.45■□□□□ 0.54
COL7A1-202ENST00000422991 GZF1Q9H116 711 aaPredicted RBP18.45■□□□□ 0.54
COL7A1-202ENST00000422991 ASB7Q9H672 318 aa18.45■□□□□ 0.54
COL7A1-202ENST00000422991 MTMR10Q9NXD2 777 aa18.45■□□□□ 0.54
COL7A1-202ENST00000422991 KANSL3Q9P2N6 904 aa18.45■□□□□ 0.54
COL7A1-202ENST00000422991 HCSTQ9UBK5 93 aa18.45■□□□□ 0.54
COL7A1-202ENST00000422991 YBX2Q9Y2T7 364 aaKnown RBP18.45■□□□□ 0.54
COL7A1-202ENST00000422991 B4GALT3O60512 393 aa18.44■□□□□ 0.54
COL7A1-202ENST00000422991 THP07101 528 aa18.44■□□□□ 0.54
COL7A1-202ENST00000422991 NFICP08651 508 aa18.44■□□□□ 0.54
COL7A1-202ENST00000422991 PSMC2P35998 433 aaKnown RBP18.44■□□□□ 0.54
COL7A1-202ENST00000422991 PBX2P40425 430 aa18.44■□□□□ 0.54
COL7A1-202ENST00000422991 PSMD6Q15008 389 aa18.44■□□□□ 0.54
COL7A1-202ENST00000422991 ZNF697Q5TEC3 545 aa18.44■□□□□ 0.54
COL7A1-202ENST00000422991 JADE1Q6IE81 842 aa18.44■□□□□ 0.54
COL7A1-202ENST00000422991 TSPAN18Q96SJ8 248 aa18.44■□□□□ 0.54
COL7A1-202ENST00000422991 CWH43Q9H720 699 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms