RNA–Protein interactions for RNA: ENST00000422704.6

SEMA4D-208, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-208ENST00000422704 STX1BP61266 288 aa11.25□□□□□ -0.61
SEMA4D-208ENST00000422704 PSMC5P62195 406 aa11.25□□□□□ -0.61
SEMA4D-208ENST00000422704 MTA3Q9BTC8 594 aa11.25□□□□□ -0.61
SEMA4D-208ENST00000422704 TRAIPQ9BWF2 469 aa11.25□□□□□ -0.61
SEMA4D-208ENST00000422704 VCX3AQ9NNX9 186 aa11.25□□□□□ -0.61
SEMA4D-208ENST00000422704 SARS2Q9NP81 518 aaKnown RBP11.25□□□□□ -0.61
SEMA4D-208ENST00000422704 HAUS2Q9NVX0 235 aa11.25□□□□□ -0.61
SEMA4D-208ENST00000422704 ZFP69BQ9UJL9 534 aa11.25□□□□□ -0.61
SEMA4D-208ENST00000422704 USP20Q9Y2K6 914 aa11.25□□□□□ -0.61
SEMA4D-208ENST00000422704 KNL1Q8NG31 2342 aa11.25□□□□□ -0.61
SEMA4D-208ENST00000422704 XPOTO43592 962 aaKnown RBP11.25□□□□□ -0.61
SEMA4D-208ENST00000422704 PFDN1O60925 122 aa11.25□□□□□ -0.61
SEMA4D-208ENST00000422704 COMTP21964 271 aa11.25□□□□□ -0.61
SEMA4D-208ENST00000422704 CHRNA3P32297 505 aa11.25□□□□□ -0.61
SEMA4D-208ENST00000422704 PMS1P54277 932 aaKnown RBP11.25□□□□□ -0.61
SEMA4D-208ENST00000422704 KRT76Q01546 638 aa11.25□□□□□ -0.61
SEMA4D-208ENST00000422704 SLC29A2Q14542 456 aa11.25□□□□□ -0.61
SEMA4D-208ENST00000422704 PDIA5Q14554 519 aa11.25□□□□□ -0.61
SEMA4D-208ENST00000422704 RC3H1Q5TC82 1133 aaKnown RBP11.25□□□□□ -0.61
SEMA4D-208ENST00000422704 LINC00116Q8NCU8 138 aa11.25□□□□□ -0.61
SEMA4D-208ENST00000422704 ATG4AQ8WYN0 398 aa11.25□□□□□ -0.61
SEMA4D-208ENST00000422704 SHCBP1LQ9BZQ2 653 aa11.25□□□□□ -0.61
SEMA4D-208ENST00000422704 ZNF302Q9NR11 478 aa11.25□□□□□ -0.61
SEMA4D-208ENST00000422704 PHLPP1O60346 1717 aa11.25□□□□□ -0.61
SEMA4D-208ENST00000422704 PDXKO00764 312 aa11.25□□□□□ -0.61
SEMA4D-208ENST00000422704 PDGFRBP09619 1106 aa11.25□□□□□ -0.61
SEMA4D-208ENST00000422704 SLURP2P0DP57 97 aa11.25□□□□□ -0.61
SEMA4D-208ENST00000422704 CHN1P15882 459 aa11.25□□□□□ -0.61
SEMA4D-208ENST00000422704 ORC1Q13415 861 aa11.25□□□□□ -0.61
SEMA4D-208ENST00000422704 C1orf146Q5VVC0 180 aa11.25□□□□□ -0.61
SEMA4D-208ENST00000422704 CATSPER3Q86XQ3 398 aa11.25□□□□□ -0.61
SEMA4D-208ENST00000422704 SLC17A8Q8NDX2 589 aa11.25□□□□□ -0.61
SEMA4D-208ENST00000422704 OR6P1Q8NGX9 317 aa11.25□□□□□ -0.61
SEMA4D-208ENST00000422704 RBM41Q96IZ5 413 aaKnown RBP11.25□□□□□ -0.61
SEMA4D-208ENST00000422704 RBM15Q96T37 977 aaKnown RBP eCLIP11.25□□□□□ -0.61
SEMA4D-208ENST00000422704 KLC2Q9H0B6 622 aa11.25□□□□□ -0.61
SEMA4D-208ENST00000422704 RPAP3Q9H6T3 665 aaPredicted RBP11.25□□□□□ -0.61
SEMA4D-208ENST00000422704 NOP53Q9NZM5 478 aaKnown RBP11.25□□□□□ -0.61
SEMA4D-208ENST00000422704 PRRC2BQ5JSZ5 2229 aaKnown RBP11.25□□□□□ -0.61
SEMA4D-208ENST00000422704 AFF2P51816 1311 aa11.25□□□□□ -0.61
SEMA4D-208ENST00000422704 NUP188Q5SRE5 1749 aa11.24□□□□□ -0.61
SEMA4D-208ENST00000422704 CTIFO43310 598 aaKnown RBP11.24□□□□□ -0.61
SEMA4D-208ENST00000422704 EN1Q05925 392 aaPredicted RBP11.24□□□□□ -0.61
SEMA4D-208ENST00000422704 AP1B1Q10567 949 aa11.24□□□□□ -0.61
SEMA4D-208ENST00000422704 ZBTB41Q5SVQ8 909 aa11.24□□□□□ -0.61
SEMA4D-208ENST00000422704 RHOT1Q8IXI2 618 aa11.24□□□□□ -0.61
SEMA4D-208ENST00000422704 LRRC71Q8N4P6 559 aa11.24□□□□□ -0.61
SEMA4D-208ENST00000422704 ACER1Q8TDN7 264 aa11.24□□□□□ -0.61
SEMA4D-208ENST00000422704 APEX2Q9UBZ4 518 aa11.24□□□□□ -0.61
SEMA4D-208ENST00000422704 SCOCQ9UIL1 159 aa11.24□□□□□ -0.61
SEMA4D-208ENST00000422704 HPCAL4Q9UM19 191 aa11.24□□□□□ -0.61
SEMA4D-208ENST00000422704 FAM205AQ6ZU69 1335 aa11.24□□□□□ -0.61
SEMA4D-208ENST00000422704 AFDNP55196 1824 aaKnown RBP11.24□□□□□ -0.61
SEMA4D-208ENST00000422704 NTSR2O95665 410 aa11.24□□□□□ -0.61
SEMA4D-208ENST00000422704 LSP1P33241 339 aa11.24□□□□□ -0.61
SEMA4D-208ENST00000422704 MDH1P40925 334 aaKnown RBP11.24□□□□□ -0.61
SEMA4D-208ENST00000422704 RABGAP1LQ5R372 815 aa11.24□□□□□ -0.61
SEMA4D-208ENST00000422704 PID1Q7Z2X4 250 aa11.24□□□□□ -0.61
SEMA4D-208ENST00000422704 MTRQ99707 1265 aa11.24□□□□□ -0.61
SEMA4D-208ENST00000422704 C7orf25Q9BPX7 421 aa11.24□□□□□ -0.61
SEMA4D-208ENST00000422704 KRT82Q9NSB4 513 aa11.24□□□□□ -0.61
SEMA4D-208ENST00000422704 FGFR1OP2Q9NVK5 253 aa11.24□□□□□ -0.61
SEMA4D-208ENST00000422704 GTSE1Q9NYZ3 720 aa11.24□□□□□ -0.61
SEMA4D-208ENST00000422704 A0A0U1RQJ8 604 aa11.24□□□□□ -0.61
SEMA4D-208ENST00000422704 LRRIQ3A6PVS8 624 aaPredicted RBP11.24□□□□□ -0.61
SEMA4D-208ENST00000422704 A8MXQ7 604 aa11.24□□□□□ -0.61
SEMA4D-208ENST00000422704 CSDE1O75534 798 aaKnown RBP11.24□□□□□ -0.61
SEMA4D-208ENST00000422704 RARBP10826 455 aa11.24□□□□□ -0.61
SEMA4D-208ENST00000422704 JAK3P52333 1124 aa11.24□□□□□ -0.61
SEMA4D-208ENST00000422704 ARFIP2P53365 341 aa11.24□□□□□ -0.61
SEMA4D-208ENST00000422704 SF3B3Q15393 1217 aaKnown RBP11.24□□□□□ -0.61
SEMA4D-208ENST00000422704 DACT3Q96B18 629 aaPredicted RBP11.24□□□□□ -0.61
SEMA4D-208ENST00000422704 MAP3K7O43318 606 aa11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 CPA2P48052 419 aa11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 EPHA7Q15375 998 aa11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 SNRNP35Q16560 246 aaKnown RBP11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 P3H1Q32P28 736 aa11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 FAXCQ5TGI0 409 aa11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 FRMD5Q7Z6J6 570 aa11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 TTC30BQ8N4P2 665 aa11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 SPON2Q9BUD6 331 aa11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 TARS2Q9BW92 718 aaKnown RBP11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 FUT8Q9BYC5 575 aa11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 FAM49BQ9NUQ9 324 aa11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 SNX9Q9Y5X1 595 aa11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 hCG_2014768A0A024R1R8 64 aa11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 LOC100653049A0A140TA62 436 aa11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 KRT34O76011 436 aa11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 HAUS5O94927 633 aa11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 TTC4O95801 387 aa11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 LDHAP00338 332 aaKnown RBP11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 KRT3P12035 628 aa11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 LCP1P13796 627 aa11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 TYK2P29597 1187 aa11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 TFDP2Q14188 446 aa11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 AP1ARQ63HQ0 302 aa11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 ARMCX2Q7L311 632 aa11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 NUDCD3Q8IVD9 361 aa11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 CYP2W1Q8TAV3 490 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms