RNA–Protein interactions for RNA: ENST00000421968.6

UFD1-203, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-203ENST00000421968 DDX19BQ9UMR2 479 aa13.39□□□□□ -0.27
UFD1-203ENST00000421968 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.38□□□□□ -0.27
UFD1-203ENST00000421968 WDR27A2RRH5 827 aa13.38□□□□□ -0.27
UFD1-203ENST00000421968 MYBPHLA2RUH7 354 aa13.38□□□□□ -0.27
UFD1-203ENST00000421968 ARL5CA6NH57 179 aa13.38□□□□□ -0.27
UFD1-203ENST00000421968 TADA2AO75478 443 aa13.38□□□□□ -0.27
UFD1-203ENST00000421968 ITGA4P13612 1032 aa13.38□□□□□ -0.27
UFD1-203ENST00000421968 PTPN2P17706 415 aa13.38□□□□□ -0.27
UFD1-203ENST00000421968 SCNN1GP51170 649 aa13.38□□□□□ -0.27
UFD1-203ENST00000421968 SEMA3BQ13214 749 aa13.38□□□□□ -0.27
UFD1-203ENST00000421968 RALGPS2Q86X27 583 aaPredicted RBP13.38□□□□□ -0.27
UFD1-203ENST00000421968 MFSD6LQ8IWD5 586 aa13.38□□□□□ -0.27
UFD1-203ENST00000421968 CAMKK1Q8N5S9 505 aa13.38□□□□□ -0.27
UFD1-203ENST00000421968 LSM14AQ8ND56 463 aaKnown RBP13.38□□□□□ -0.27
UFD1-203ENST00000421968 TTC8Q8TAM2 541 aa13.38□□□□□ -0.27
UFD1-203ENST00000421968 LNX1Q8TBB1 728 aaPredicted RBP13.38□□□□□ -0.27
UFD1-203ENST00000421968 OTUD7AQ8TE49 926 aaPredicted RBP13.38□□□□□ -0.27
UFD1-203ENST00000421968 TTPALQ9BTX7 342 aa13.38□□□□□ -0.27
UFD1-203ENST00000421968 MIOSQ9NXC5 875 aa13.38□□□□□ -0.27
UFD1-203ENST00000421968 COL6A6A6NMZ7 2263 aa13.38□□□□□ -0.27
UFD1-203ENST00000421968 GOLGA4Q13439 2230 aaKnown RBP13.37□□□□□ -0.27
UFD1-203ENST00000421968 A0A087WV48 116 aa13.37□□□□□ -0.27
UFD1-203ENST00000421968 UPK3BL1B0FP48 263 aa13.37□□□□□ -0.27
UFD1-203ENST00000421968 UPK3BL2E5RIL1 263 aa13.37□□□□□ -0.27
UFD1-203ENST00000421968 CAPN9O14815 690 aa13.37□□□□□ -0.27
UFD1-203ENST00000421968 ATG13O75143 517 aa13.37□□□□□ -0.27
UFD1-203ENST00000421968 MLH1P40692 756 aa13.37□□□□□ -0.27
UFD1-203ENST00000421968 ABCG1P45844 678 aa13.37□□□□□ -0.27
UFD1-203ENST00000421968 PRSS36Q5K4E3 855 aa13.37□□□□□ -0.27
UFD1-203ENST00000421968 PIGKQ92643 395 aa13.37□□□□□ -0.27
UFD1-203ENST00000421968 EVI5LQ96CN4 794 aa13.37□□□□□ -0.27
UFD1-203ENST00000421968 ZSWIM3Q96MP5 696 aa13.37□□□□□ -0.27
UFD1-203ENST00000421968 HHIPQ96QV1 700 aa13.37□□□□□ -0.27
UFD1-203ENST00000421968 CORO1BQ9BR76 489 aa13.37□□□□□ -0.27
UFD1-203ENST00000421968 NUSAP1Q9BXS6 441 aaKnown RBP13.37□□□□□ -0.27
UFD1-203ENST00000421968 NRBP2Q9NSY0 501 aa13.37□□□□□ -0.27
UFD1-203ENST00000421968 AGPAT5Q9NUQ2 364 aa13.37□□□□□ -0.27
UFD1-203ENST00000421968 TCEAL9Q9UHQ7 104 aa13.37□□□□□ -0.27
UFD1-203ENST00000421968 SF3B1O75533 1304 aaKnown RBP eCLIP13.37□□□□□ -0.271e-6■■■■■ 75.7
UFD1-203ENST00000421968 HEPACAM2A8MVW5 462 aa13.36□□□□□ -0.27
UFD1-203ENST00000421968 MEIS1O00470 390 aa13.36□□□□□ -0.27
UFD1-203ENST00000421968 ZNF197O14709 1029 aa13.36□□□□□ -0.27
UFD1-203ENST00000421968 CHADO15335 359 aa13.36□□□□□ -0.27
UFD1-203ENST00000421968 PSAPP07602 524 aa13.36□□□□□ -0.27
UFD1-203ENST00000421968 OR1D2P34982 312 aa13.36□□□□□ -0.27
UFD1-203ENST00000421968 NMIQ13287 307 aaPredicted RBP13.36□□□□□ -0.27
UFD1-203ENST00000421968 TRIM61Q5EBN2 209 aa13.36□□□□□ -0.27
UFD1-203ENST00000421968 UBXN11Q5T124 520 aa13.36□□□□□ -0.27
UFD1-203ENST00000421968 FAM171A1Q5VUB5 890 aa13.36□□□□□ -0.27
UFD1-203ENST00000421968 PMS2CLQ68D20 193 aa13.36□□□□□ -0.27
UFD1-203ENST00000421968 RTL10Q7L3V2 364 aa13.36□□□□□ -0.27
UFD1-203ENST00000421968 ZNF410Q86VK4 478 aa13.36□□□□□ -0.27
UFD1-203ENST00000421968 PLEKHM2Q8IWE5 1019 aa13.36□□□□□ -0.27
UFD1-203ENST00000421968 TMEFF1Q8IYR6 380 aa13.36□□□□□ -0.27
UFD1-203ENST00000421968 HDDC3Q8N4P3 179 aa13.36□□□□□ -0.27
UFD1-203ENST00000421968 PIP4K2CQ8TBX8 421 aa13.36□□□□□ -0.27
UFD1-203ENST00000421968 ADAMTS14Q8WXS8 1223 aa13.36□□□□□ -0.27
UFD1-203ENST00000421968 ZFP42Q96MM3 310 aa13.36□□□□□ -0.27
UFD1-203ENST00000421968 CNNM2Q9H8M5 875 aa13.36□□□□□ -0.27
UFD1-203ENST00000421968 POLR3BQ9NW08 1133 aaPredicted RBP13.36□□□□□ -0.27
UFD1-203ENST00000421968 EVLQ9UI08 416 aaPredicted RBP13.36□□□□□ -0.27
UFD1-203ENST00000421968 INVSQ9Y283 1065 aa13.36□□□□□ -0.27
UFD1-203ENST00000421968 VWA8A3KMH1 1905 aa13.36□□□□□ -0.27
UFD1-203ENST00000421968 NCANO14594 1321 aa13.36□□□□□ -0.27
UFD1-203ENST00000421968 CAPN8A6NHC0 703 aa13.35□□□□□ -0.27
UFD1-203ENST00000421968 PYCARD-AS1I3L0S3 204 aa13.35□□□□□ -0.27
UFD1-203ENST00000421968 DHX15O43143 795 aaKnown RBP13.35□□□□□ -0.27
UFD1-203ENST00000421968 LRG1P02750 347 aa13.35□□□□□ -0.27
UFD1-203ENST00000421968 OATP04181 439 aa13.35□□□□□ -0.27
UFD1-203ENST00000421968 NTRK1P04629 796 aa13.35□□□□□ -0.27
UFD1-203ENST00000421968 MS4A1P11836 297 aa13.35□□□□□ -0.27
UFD1-203ENST00000421968 ENGP17813 658 aa13.35□□□□□ -0.27
UFD1-203ENST00000421968 ZNF76P36508 570 aa13.35□□□□□ -0.27
UFD1-203ENST00000421968 DNM2P50570 870 aa13.35□□□□□ -0.27
UFD1-203ENST00000421968 CFHR1Q03591 330 aa13.35□□□□□ -0.27
UFD1-203ENST00000421968 RAB33AQ14088 237 aa13.35□□□□□ -0.27
UFD1-203ENST00000421968 RHPN2Q8IUC4 686 aa13.35□□□□□ -0.27
UFD1-203ENST00000421968 SCUBE3Q8IX30 993 aa13.35□□□□□ -0.27
UFD1-203ENST00000421968 PNPLA1Q8N8W4 532 aa13.35□□□□□ -0.27
UFD1-203ENST00000421968 CNNM3Q8NE01 707 aa13.35□□□□□ -0.27
UFD1-203ENST00000421968 ZSCAN18Q8TBC5 510 aaPredicted RBP13.35□□□□□ -0.27
UFD1-203ENST00000421968 HASPINQ8TF76 798 aa13.35□□□□□ -0.27
UFD1-203ENST00000421968 NLRP4Q96MN2 994 aa13.35□□□□□ -0.27
UFD1-203ENST00000421968 RNF39Q9H2S5 420 aa13.35□□□□□ -0.27
UFD1-203ENST00000421968 DKK4Q9UBT3 224 aa13.35□□□□□ -0.27
UFD1-203ENST00000421968 PCDHA10Q9Y5I2 948 aa13.35□□□□□ -0.27
UFD1-203ENST00000421968 PTPRQQ9UMZ3 2332 aa13.35□□□□□ -0.27
UFD1-203ENST00000421968 MICAL2O94851 1124 aa13.34□□□□□ -0.27
UFD1-203ENST00000421968 CCR2P41597 374 aa13.34□□□□□ -0.27
UFD1-203ENST00000421968 DHPSP49366 369 aaPredicted RBP13.34□□□□□ -0.27
UFD1-203ENST00000421968 HNRNPDQ14103 355 aaKnown RBP13.34□□□□□ -0.27
UFD1-203ENST00000421968 ZNF746Q6NUN9 644 aaPredicted RBP13.34□□□□□ -0.27
UFD1-203ENST00000421968 PDXDC1Q6P996 788 aa13.34□□□□□ -0.27
UFD1-203ENST00000421968 PDZD4Q76G19 769 aaPredicted RBP13.34□□□□□ -0.27
UFD1-203ENST00000421968 CYB5R4Q7L1T6 521 aa13.34□□□□□ -0.27
UFD1-203ENST00000421968 SMAP1Q8IYB5 467 aaPredicted RBP13.34□□□□□ -0.27
UFD1-203ENST00000421968 SMG8Q8ND04 991 aaKnown RBP13.34□□□□□ -0.27
UFD1-203ENST00000421968 PGBD1Q96JS3 809 aa13.34□□□□□ -0.27
UFD1-203ENST00000421968 DCBLD2Q96PD2 775 aa13.34□□□□□ -0.27
UFD1-203ENST00000421968 SPZ1Q9BXG8 430 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms