RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 AP1B1Q10567 949 aa11.41□□□□□ -0.58
PTCH1-206ENST00000421141 FRA10AC1Q70Z53 315 aa11.41□□□□□ -0.58
PTCH1-206ENST00000421141 C18orf8Q96DM3 657 aa11.41□□□□□ -0.58
PTCH1-206ENST00000421141 PPP1R12CQ9BZL4 782 aa11.41□□□□□ -0.58
PTCH1-206ENST00000421141 FBXO2Q9UK22 296 aaPredicted RBP11.41□□□□□ -0.58
PTCH1-206ENST00000421141 DFFAO00273 331 aa11.41□□□□□ -0.58
PTCH1-206ENST00000421141 ASPHQ12797 758 aa11.41□□□□□ -0.58
PTCH1-206ENST00000421141 TFDP2Q14188 446 aa11.41□□□□□ -0.58
PTCH1-206ENST00000421141 NXNQ6DKJ4 435 aa11.41□□□□□ -0.58
PTCH1-206ENST00000421141 WNK4Q96J92 1243 aa11.41□□□□□ -0.58
PTCH1-206ENST00000421141 ADAMTS1Q9UHI8 967 aa11.41□□□□□ -0.58
PTCH1-206ENST00000421141 MOCS2O96007 188 aaPredicted RBP11.4□□□□□ -0.58
PTCH1-206ENST00000421141 ALDH2P05091 517 aa11.4□□□□□ -0.58
PTCH1-206ENST00000421141 FMR1NBQ8N0W7 255 aaPredicted RBP11.4□□□□□ -0.58
PTCH1-206ENST00000421141 SRGAP2O75044 1071 aa11.4□□□□□ -0.58
PTCH1-206ENST00000421141 ANTXR2P58335 489 aa11.4□□□□□ -0.58
PTCH1-206ENST00000421141 VSTM4Q8IW00 320 aa11.4□□□□□ -0.58
PTCH1-206ENST00000421141 SYT2Q8N9I0 419 aaPredicted RBP11.4□□□□□ -0.58
PTCH1-206ENST00000421141 NLGN2Q8NFZ4 835 aa11.4□□□□□ -0.58
PTCH1-206ENST00000421141 AFAP1L1Q8TED9 768 aa11.4□□□□□ -0.58
PTCH1-206ENST00000421141 MUC3BQ9H195 1237 aa11.4□□□□□ -0.58
PTCH1-206ENST00000421141 EGFRP00533 1210 aa11.4□□□□□ -0.58
PTCH1-206ENST00000421141 ZBTB48P10074 688 aaPredicted RBP11.4□□□□□ -0.58
PTCH1-206ENST00000421141 AMPD2Q01433 879 aa11.4□□□□□ -0.58
PTCH1-206ENST00000421141 ZNF235Q14590 738 aa11.4□□□□□ -0.58
PTCH1-206ENST00000421141 APBA2Q99767 749 aa11.4□□□□□ -0.58
PTCH1-206ENST00000421141 DPH5Q9H2P9 285 aa11.4□□□□□ -0.58
PTCH1-206ENST00000421141 TMEM8AQ9HCN3 771 aa11.4□□□□□ -0.58
PTCH1-206ENST00000421141 ABI2Q9NYB9 513 aaPredicted RBP11.4□□□□□ -0.58
PTCH1-206ENST00000421141 TLK1Q9UKI8 766 aa11.4□□□□□ -0.58
PTCH1-206ENST00000421141 CAPN2P17655 700 aa11.4□□□□□ -0.58
PTCH1-206ENST00000421141 SLC15A5A6NIM6 579 aa11.4□□□□□ -0.58
PTCH1-206ENST00000421141 RRP9O43818 475 aaKnown RBP11.4□□□□□ -0.58
PTCH1-206ENST00000421141 PREPLQ4J6C6 727 aaPredicted RBP11.4□□□□□ -0.58
PTCH1-206ENST00000421141 UPF1Q92900 1129 aaKnown RBP eCLIP11.4□□□□□ -0.58
PTCH1-206ENST00000421141 TINF2Q9BSI4 451 aa11.4□□□□□ -0.58
PTCH1-206ENST00000421141 RIOX1Q9H6W3 641 aa11.4□□□□□ -0.58
PTCH1-206ENST00000421141 PRG3Q9Y2Y8 225 aaPredicted RBP11.4□□□□□ -0.58
PTCH1-206ENST00000421141 TRIM49P0CI25 452 aa11.4□□□□□ -0.59
PTCH1-206ENST00000421141 TRIM49CP0CI26 452 aa11.4□□□□□ -0.59
PTCH1-206ENST00000421141 SULT1E1P49888 294 aa11.4□□□□□ -0.59
PTCH1-206ENST00000421141 IKBKEQ14164 716 aa11.4□□□□□ -0.59
PTCH1-206ENST00000421141 CATSPERGQ6ZRH7 1159 aa11.4□□□□□ -0.59
PTCH1-206ENST00000421141 GPR142Q7Z601 462 aa11.4□□□□□ -0.59
PTCH1-206ENST00000421141 TAF1DQ9H5J8 278 aaPredicted RBP11.4□□□□□ -0.59
PTCH1-206ENST00000421141 DDX4Q9NQI0 724 aaKnown RBP11.4□□□□□ -0.59
PTCH1-206ENST00000421141 FAM114A2Q9NRY5 505 aa11.4□□□□□ -0.59
PTCH1-206ENST00000421141 GTF2F1P35269 517 aaKnown RBP eCLIP11.39□□□□□ -0.59
PTCH1-206ENST00000421141 TPI1P60174 286 aa11.39□□□□□ -0.59
PTCH1-206ENST00000421141 ITPRIPL1Q6GPH6 555 aa11.39□□□□□ -0.59
PTCH1-206ENST00000421141 SPTLC3Q9NUV7 552 aa11.39□□□□□ -0.59
PTCH1-206ENST00000421141 UBQLN1Q9UMX0 589 aaKnown RBP11.39□□□□□ -0.59
PTCH1-206ENST00000421141 PI4K2BG5E9Z4 385 aa11.39□□□□□ -0.59
PTCH1-206ENST00000421141 BUB1BO60566 1050 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-206ENST00000421141 CYP2C19P33261 490 aa11.39□□□□□ -0.59
PTCH1-206ENST00000421141 CHAMP1Q96JM3 812 aa11.39□□□□□ -0.59
PTCH1-206ENST00000421141 SENP7Q9BQF6 1050 aa11.39□□□□□ -0.59
PTCH1-206ENST00000421141 NAV1Q8NEY1 1877 aa11.39□□□□□ -0.59
PTCH1-206ENST00000421141 EFCAB8A8MWE9 144 aa11.39□□□□□ -0.59
PTCH1-206ENST00000421141 PRR29P0C7W0 189 aa11.39□□□□□ -0.59
PTCH1-206ENST00000421141 IRF1P10914 325 aa11.39□□□□□ -0.59
PTCH1-206ENST00000421141 ITIH5Q86UX2 942 aa11.39□□□□□ -0.59
PTCH1-206ENST00000421141 FAF2Q96CS3 445 aa11.39□□□□□ -0.59
PTCH1-206ENST00000421141 EMILIN2Q9BXX0 1053 aa11.39□□□□□ -0.59
PTCH1-206ENST00000421141 MRPL9Q9BYD2 267 aaKnown RBP11.39□□□□□ -0.59
PTCH1-206ENST00000421141 KLK14Q9P0G3 267 aa11.39□□□□□ -0.59
PTCH1-206ENST00000421141 PSEN2P49810 448 aa11.39□□□□□ -0.59
PTCH1-206ENST00000421141 LMBRD2Q68DH5 695 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-206ENST00000421141 SLC30A10Q6XR72 485 aa11.39□□□□□ -0.59
PTCH1-206ENST00000421141 ATP8B4Q8TF62 1192 aa11.39□□□□□ -0.59
PTCH1-206ENST00000421141 GOLPH3LQ9H4A5 285 aa11.39□□□□□ -0.59
PTCH1-206ENST00000421141 SETD4Q9NVD3 440 aa11.39□□□□□ -0.59
PTCH1-206ENST00000421141 FZD1Q9UP38 647 aa11.39□□□□□ -0.59
PTCH1-206ENST00000421141 GAKO14976 1311 aa11.39□□□□□ -0.59
PTCH1-206ENST00000421141 GKAP1Q5VSY0 366 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-206ENST00000421141 HEATR6Q6AI08 1181 aaKnown RBP11.39□□□□□ -0.59
PTCH1-206ENST00000421141 SHC4Q6S5L8 630 aa11.39□□□□□ -0.59
PTCH1-206ENST00000421141 ZNF564Q8TBZ8 553 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-206ENST00000421141 C11orf70Q9BRQ4 267 aa11.39□□□□□ -0.59
PTCH1-206ENST00000421141 WDR35Q9P2L0 1181 aa11.39□□□□□ -0.59
PTCH1-206ENST00000421141 APEX2Q9UBZ4 518 aa11.39□□□□□ -0.59
PTCH1-206ENST00000421141 FAN1Q9Y2M0 1017 aa11.39□□□□□ -0.59
PTCH1-206ENST00000421141 EBAG9O00559 213 aa11.39□□□□□ -0.59
PTCH1-206ENST00000421141 ZWINTO95229 277 aa11.39□□□□□ -0.59
PTCH1-206ENST00000421141 EPHB3P54753 998 aa11.39□□□□□ -0.59
PTCH1-206ENST00000421141 SLC7A5P2Q9GIP4 190 aa11.39□□□□□ -0.59
PTCH1-206ENST00000421141 DHX35Q9H5Z1 703 aaKnown RBP11.39□□□□□ -0.59
PTCH1-206ENST00000421141 SOWAHDA6NJG2 315 aa11.38□□□□□ -0.59
PTCH1-206ENST00000421141 MYBP10242 640 aa11.38□□□□□ -0.59
PTCH1-206ENST00000421141 STX2P32856 288 aa11.38□□□□□ -0.59
PTCH1-206ENST00000421141 CLCN3P51790 818 aa11.38□□□□□ -0.59
PTCH1-206ENST00000421141 ELAVL2Q12926 359 aaKnown RBP11.38□□□□□ -0.59
PTCH1-206ENST00000421141 TTC30BQ8N4P2 665 aa11.38□□□□□ -0.59
PTCH1-206ENST00000421141 RAB42Q8N4Z0 105 aa11.38□□□□□ -0.59
PTCH1-206ENST00000421141 PLEKHA5Q9HAU0 1116 aa11.38□□□□□ -0.59
PTCH1-206ENST00000421141 ALS2Q96Q42 1657 aa11.38□□□□□ -0.59
PTCH1-206ENST00000421141 MIF4GDA9UHW6 222 aaKnown RBP11.38□□□□□ -0.59
PTCH1-206ENST00000421141 TROVE2P10155 538 aaKnown RBP eCLIP11.38□□□□□ -0.59
PTCH1-206ENST00000421141 FMO5P49326 533 aa11.38□□□□□ -0.59
PTCH1-206ENST00000421141 VGLL2Q8N8G2 317 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms