RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.02□□□□□ -0.32
CLCN4-203ENST00000421085 PCMTD2Q9NV79 361 aa13.02□□□□□ -0.32
CLCN4-203ENST00000421085 GID8Q9NWU2 228 aa13.02□□□□□ -0.32
CLCN4-203ENST00000421085 RFX7Q2KHR2 1363 aa13.02□□□□□ -0.33
CLCN4-203ENST00000421085 CFAP65Q6ZU64 1925 aaKnown RBP13.02□□□□□ -0.33
CLCN4-203ENST00000421085 KLK7P49862 253 aa13.02□□□□□ -0.33
CLCN4-203ENST00000421085 FAM102AQ5T9C2 384 aaPredicted RBP13.02□□□□□ -0.33
CLCN4-203ENST00000421085 DSTYKQ6XUX3 929 aa13.02□□□□□ -0.33
CLCN4-203ENST00000421085 FAM160B2Q86V87 743 aa13.02□□□□□ -0.33
CLCN4-203ENST00000421085 SLC30A5Q8TAD4 765 aa13.02□□□□□ -0.33
CLCN4-203ENST00000421085 L2HGDHQ9H9P8 463 aa13.02□□□□□ -0.33
CLCN4-203ENST00000421085 TSR3Q9UJK0 312 aaKnown RBP13.02□□□□□ -0.33
CLCN4-203ENST00000421085 CHMP2BQ9UQN3 213 aa13.02□□□□□ -0.33
CLCN4-203ENST00000421085 APOL1O14791 398 aa13.02□□□□□ -0.33
CLCN4-203ENST00000421085 KCNN4O15554 427 aa13.02□□□□□ -0.33
CLCN4-203ENST00000421085 TBC1D4O60343 1298 aa13.02□□□□□ -0.33
CLCN4-203ENST00000421085 RCOR2Q8IZ40 523 aa13.02□□□□□ -0.33
CLCN4-203ENST00000421085 ABI1Q8IZP0 508 aa13.02□□□□□ -0.33
CLCN4-203ENST00000421085 INPP5DQ92835 1189 aa13.02□□□□□ -0.33
CLCN4-203ENST00000421085 MANSC1Q9H8J5 431 aa13.02□□□□□ -0.33
CLCN4-203ENST00000421085 SEL1LQ9UBV2 794 aa13.02□□□□□ -0.33
CLCN4-203ENST00000421085 ATP7BP35670 1465 aa13.02□□□□□ -0.33
CLCN4-203ENST00000421085 ZCWPW2Q504Y3 356 aa13.02□□□□□ -0.33
CLCN4-203ENST00000421085 DCAF4Q8WV16 495 aa13.02□□□□□ -0.33
CLCN4-203ENST00000421085 KLF6Q99612 283 aaPredicted RBP13.02□□□□□ -0.33
CLCN4-203ENST00000421085 TRIM9Q9C026 710 aa13.02□□□□□ -0.33
CLCN4-203ENST00000421085 DBNDD1Q9H9R9 158 aa13.02□□□□□ -0.33
CLCN4-203ENST00000421085 BCS1LQ9Y276 419 aa13.02□□□□□ -0.33
CLCN4-203ENST00000421085 TTC37Q6PGP7 1564 aa13.02□□□□□ -0.33
CLCN4-203ENST00000421085 LRRIQ3A6PVS8 624 aaPredicted RBP13.01□□□□□ -0.33
CLCN4-203ENST00000421085 USP17L10C9JJH3 530 aa13.01□□□□□ -0.33
CLCN4-203ENST00000421085 E5RI56 91 aa13.01□□□□□ -0.33
CLCN4-203ENST00000421085 SESN2P58004 480 aaPredicted RBP13.01□□□□□ -0.33
CLCN4-203ENST00000421085 RPS6P62753 249 aaKnown RBP13.01□□□□□ -0.33
CLCN4-203ENST00000421085 ZNF200P98182 395 aaPredicted RBP13.01□□□□□ -0.33
CLCN4-203ENST00000421085 PTK7Q13308 1070 aa13.01□□□□□ -0.33
CLCN4-203ENST00000421085 KPNB1Q14974 876 aaKnown RBP13.01□□□□□ -0.33
CLCN4-203ENST00000421085 NAB2Q15742 525 aa13.01□□□□□ -0.33
CLCN4-203ENST00000421085 CC2D2BQ6DHV5 1058 aa13.01□□□□□ -0.33
CLCN4-203ENST00000421085 ENOSF1Q7L5Y1 443 aa13.01□□□□□ -0.33
CLCN4-203ENST00000421085 MCPH1Q8NEM0 835 aa13.01□□□□□ -0.33
CLCN4-203ENST00000421085 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.01□□□□□ -0.33
CLCN4-203ENST00000421085 SEPT3Q9UH03 358 aa13.01□□□□□ -0.33
CLCN4-203ENST00000421085 XPO7Q9UIA9 1087 aaKnown RBP13.01□□□□□ -0.33
CLCN4-203ENST00000421085 ERP44Q9BS26 406 aa13.01□□□□□ -0.33
CLCN4-203ENST00000421085 SFMBT1Q9UHJ3 866 aa13.01□□□□□ -0.33
CLCN4-203ENST00000421085 PDE5AO76074 875 aa13.01□□□□□ -0.33
CLCN4-203ENST00000421085 IGKV5-2P06315 115 aa13.01□□□□□ -0.33
CLCN4-203ENST00000421085 SERPINB1P30740 379 aa13.01□□□□□ -0.33
CLCN4-203ENST00000421085 EXOSC10Q01780 885 aaKnown RBP13.01□□□□□ -0.33
CLCN4-203ENST00000421085 PLOD1Q02809 727 aaPredicted RBP13.01□□□□□ -0.33
CLCN4-203ENST00000421085 DPP9Q86TI2 863 aa13.01□□□□□ -0.33
CLCN4-203ENST00000421085 PDCD6IPQ8WUM4 868 aaKnown RBP13.01□□□□□ -0.33
CLCN4-203ENST00000421085 NEUROG2Q9H2A3 272 aa13.01□□□□□ -0.33
CLCN4-203ENST00000421085 SYNDIG1LA6NDD5 238 aa13.01□□□□□ -0.33
CLCN4-203ENST00000421085 WBP4O75554 376 aaKnown RBP13.01□□□□□ -0.33
CLCN4-203ENST00000421085 MAGEA4P43358 317 aa13.01□□□□□ -0.33
CLCN4-203ENST00000421085 NT5C2P49902 561 aa13.01□□□□□ -0.33
CLCN4-203ENST00000421085 MXD4Q14582 209 aaPredicted RBP13.01□□□□□ -0.33
CLCN4-203ENST00000421085 TRAF7Q6Q0C0 670 aa13.01□□□□□ -0.33
CLCN4-203ENST00000421085 APLFQ8IW19 511 aaPredicted RBP13.01□□□□□ -0.33
CLCN4-203ENST00000421085 EGFL8Q99944 293 aa13.01□□□□□ -0.33
CLCN4-203ENST00000421085 M0R3G1 203 aa13.01□□□□□ -0.33
CLCN4-203ENST00000421085 DNAJC3Q13217 504 aa13.01□□□□□ -0.33
CLCN4-203ENST00000421085 ITPRIPL1Q6GPH6 555 aa13.01□□□□□ -0.33
CLCN4-203ENST00000421085 SGMS1Q86VZ5 419 aa13.01□□□□□ -0.33
CLCN4-203ENST00000421085 OR6P1Q8NGX9 317 aa13.01□□□□□ -0.33
CLCN4-203ENST00000421085 PRPF18Q99633 342 aaKnown RBP13.01□□□□□ -0.33
CLCN4-203ENST00000421085 STK33Q9BYT3 514 aa13.01□□□□□ -0.33
CLCN4-203ENST00000421085 CAAP1Q9H8G2 361 aa13.01□□□□□ -0.33
CLCN4-203ENST00000421085 ZC3H7BQ9UGR2 993 aaKnown RBP13.01□□□□□ -0.33
CLCN4-203ENST00000421085 BLOC1S6Q9UL45 172 aa13.01□□□□□ -0.33
CLCN4-203ENST00000421085 ABCB11O95342 1321 aa13□□□□□ -0.33
CLCN4-203ENST00000421085 CDHR2Q9BYE9 1310 aa13□□□□□ -0.33
CLCN4-203ENST00000421085 ZCCHC18P0CG32 403 aa13□□□□□ -0.33
CLCN4-203ENST00000421085 UCHL3P15374 230 aa13□□□□□ -0.33
CLCN4-203ENST00000421085 ACTR2P61160 394 aa13□□□□□ -0.33
CLCN4-203ENST00000421085 TAP1Q03518 808 aa13□□□□□ -0.33
CLCN4-203ENST00000421085 ITIH4Q14624 930 aa13□□□□□ -0.33
CLCN4-203ENST00000421085 RFWD2Q8NHY2 731 aa13□□□□□ -0.33
CLCN4-203ENST00000421085 LZICQ8WZA0 190 aa13□□□□□ -0.33
CLCN4-203ENST00000421085 PGBD4Q96DM1 585 aa13□□□□□ -0.33
CLCN4-203ENST00000421085 SOX11P35716 441 aa13□□□□□ -0.33
CLCN4-203ENST00000421085 VCPP55072 806 aaKnown RBP13□□□□□ -0.33
CLCN4-203ENST00000421085 MTHFD1LQ6UB35 978 aa13□□□□□ -0.33
CLCN4-203ENST00000421085 PID1Q7Z2X4 250 aa13□□□□□ -0.33
CLCN4-203ENST00000421085 CASKIN2Q8WXE0 1202 aa13□□□□□ -0.33
CLCN4-203ENST00000421085 CLMNQ96JQ2 1002 aa13□□□□□ -0.33
CLCN4-203ENST00000421085 MTRQ99707 1265 aa13□□□□□ -0.33
CLCN4-203ENST00000421085 SH3GL2Q99962 352 aa13□□□□□ -0.33
CLCN4-203ENST00000421085 UBA6A0AVT1 1052 aaPredicted RBP13□□□□□ -0.33
CLCN4-203ENST00000421085 DGKIO75912 1065 aa13□□□□□ -0.33
CLCN4-203ENST00000421085 APRTP07741 180 aa13□□□□□ -0.33
CLCN4-203ENST00000421085 ITGA8P53708 1063 aa13□□□□□ -0.33
CLCN4-203ENST00000421085 NME3Q13232 169 aa13□□□□□ -0.33
CLCN4-203ENST00000421085 LAMB3Q13751 1172 aa13□□□□□ -0.33
CLCN4-203ENST00000421085 MAPK6Q16659 721 aa13□□□□□ -0.33
CLCN4-203ENST00000421085 PPP1R18Q6NYC8 613 aa13□□□□□ -0.33
CLCN4-203ENST00000421085 MIGA2Q7L4E1 593 aa13□□□□□ -0.33
CLCN4-203ENST00000421085 FAM118BQ9BPY3 351 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms