RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 TARS2Q9BW92 718 aaKnown RBP12.14□□□□□ -0.47
SSBP3-206ENST00000420121 FNIP2Q9P278 1114 aa12.14□□□□□ -0.47
SSBP3-206ENST00000420121 SSX2IPQ9Y2D8 614 aa12.14□□□□□ -0.47
SSBP3-206ENST00000420121 NR2E1Q9Y466 385 aa12.14□□□□□ -0.47
SSBP3-206ENST00000420121 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.14□□□□□ -0.47
SSBP3-206ENST00000420121 SLC16A4O15374 487 aa12.13□□□□□ -0.47
SSBP3-206ENST00000420121 N4BP1O75113 896 aaKnown RBP12.13□□□□□ -0.47
SSBP3-206ENST00000420121 RFPL2O75678 378 aa12.13□□□□□ -0.47
SSBP3-206ENST00000420121 BRD1O95696 1058 aa12.13□□□□□ -0.47
SSBP3-206ENST00000420121 GLUD1P00367 558 aa12.13□□□□□ -0.47
SSBP3-206ENST00000420121 C1RP00736 705 aa12.13□□□□□ -0.47
SSBP3-206ENST00000420121 RPL17P18621 184 aaKnown RBP12.13□□□□□ -0.47
SSBP3-206ENST00000420121 GRM5P41594 1212 aa12.13□□□□□ -0.47
SSBP3-206ENST00000420121 SOX4Q06945 474 aaPredicted RBP12.13□□□□□ -0.47
SSBP3-206ENST00000420121 SIGLEC14Q08ET2 396 aa12.13□□□□□ -0.47
SSBP3-206ENST00000420121 RAD51AP2Q09MP3 1159 aa12.13□□□□□ -0.47
SSBP3-206ENST00000420121 DMP1Q13316 513 aaPredicted RBP12.13□□□□□ -0.47
SSBP3-206ENST00000420121 ZRSR1Q15695 479 aaKnown RBP12.13□□□□□ -0.47
SSBP3-206ENST00000420121 TMEM132AQ24JP5 1023 aa12.13□□□□□ -0.47
SSBP3-206ENST00000420121 GLRA4Q5JXX5 417 aa12.13□□□□□ -0.47
SSBP3-206ENST00000420121 C15orf39Q6ZRI6 1047 aa12.13□□□□□ -0.47
SSBP3-206ENST00000420121 ZDHHC14Q8IZN3 488 aa12.13□□□□□ -0.47
SSBP3-206ENST00000420121 KCTD17Q8N5Z5 321 aa12.13□□□□□ -0.47
SSBP3-206ENST00000420121 C3orf58Q8NDZ4 430 aa12.13□□□□□ -0.47
SSBP3-206ENST00000420121 TMEM161BQ8NDZ6 487 aa12.13□□□□□ -0.47
SSBP3-206ENST00000420121 LNX1Q8TBB1 728 aaPredicted RBP12.13□□□□□ -0.47
SSBP3-206ENST00000420121 SPIRE2Q8WWL2 714 aa12.13□□□□□ -0.47
SSBP3-206ENST00000420121 RIN2Q8WYP3 895 aaPredicted RBP12.13□□□□□ -0.47
SSBP3-206ENST00000420121 PIK3R5Q8WYR1 880 aa12.13□□□□□ -0.47
SSBP3-206ENST00000420121 ZBTB45Q96K62 511 aaPredicted RBP12.13□□□□□ -0.47
SSBP3-206ENST00000420121 ZMAT2Q96NC0 199 aaKnown RBP12.13□□□□□ -0.47
SSBP3-206ENST00000420121 TIPINQ9BVW5 301 aa12.13□□□□□ -0.47
SSBP3-206ENST00000420121 RHOBTB2Q9BYZ6 727 aa12.13□□□□□ -0.47
SSBP3-206ENST00000420121 NT5C3AQ9H0P0 336 aa12.13□□□□□ -0.47
SSBP3-206ENST00000420121 SMOC2Q9H3U7 446 aa12.13□□□□□ -0.47
SSBP3-206ENST00000420121 C17orf75Q9HAS0 396 aa12.13□□□□□ -0.47
SSBP3-206ENST00000420121 KMT5AQ9NQR1 393 aa12.13□□□□□ -0.47
SSBP3-206ENST00000420121 TSHZ2Q9NRE2 1034 aa12.13□□□□□ -0.47
SSBP3-206ENST00000420121 BLOC1S4Q9NUP1 217 aa12.13□□□□□ -0.47
SSBP3-206ENST00000420121 USTQ9Y2C2 406 aa12.13□□□□□ -0.47
SSBP3-206ENST00000420121 SF3B1O75533 1304 aaKnown RBP eCLIP12.12□□□□□ -0.473e-6■■■■■ 81.8
SSBP3-206ENST00000420121 NPHP3-ACAD11A0A0J9YXS1 232 aa12.12□□□□□ -0.47
SSBP3-206ENST00000420121 SMIM28A0A1B0GU29 152 aa12.12□□□□□ -0.47
SSBP3-206ENST00000420121 TMEM189-UBE2V1I3L0A0 370 aa12.12□□□□□ -0.47
SSBP3-206ENST00000420121 ADAM12O43184 909 aa12.12□□□□□ -0.47
SSBP3-206ENST00000420121 TGM5O43548 720 aa12.12□□□□□ -0.47
SSBP3-206ENST00000420121 TADA2AO75478 443 aa12.12□□□□□ -0.47
SSBP3-206ENST00000420121 ASGR2P07307 311 aa12.12□□□□□ -0.47
SSBP3-206ENST00000420121 PLA2G4BP0C869 781 aa12.12□□□□□ -0.47
SSBP3-206ENST00000420121 SPATA31D3P0C874 917 aa12.12□□□□□ -0.47
SSBP3-206ENST00000420121 MYBP10242 640 aa12.12□□□□□ -0.47
SSBP3-206ENST00000420121 MAPTP10636 758 aaKnown RBP12.12□□□□□ -0.47
SSBP3-206ENST00000420121 PLS3P13797 630 aa12.12□□□□□ -0.47
SSBP3-206ENST00000420121 SF3A1Q15459 793 aaKnown RBP12.12□□□□□ -0.47
SSBP3-206ENST00000420121 FAM171A1Q5VUB5 890 aa12.12□□□□□ -0.47
SSBP3-206ENST00000420121 SPATA31D4Q6ZUB0 917 aa12.12□□□□□ -0.47
SSBP3-206ENST00000420121 BRAPQ7Z569 592 aa12.12□□□□□ -0.47
SSBP3-206ENST00000420121 PALB2Q86YC2 1186 aa12.12□□□□□ -0.47
SSBP3-206ENST00000420121 GLYCTKQ8IVS8 523 aa12.12□□□□□ -0.47
SSBP3-206ENST00000420121 KREMEN2Q8NCW0 462 aa12.12□□□□□ -0.47
SSBP3-206ENST00000420121 HDAC7Q8WUI4 952 aa12.12□□□□□ -0.47
SSBP3-206ENST00000420121 KCNN1Q92952 543 aa12.12□□□□□ -0.47
SSBP3-206ENST00000420121 FAM122AQ96E09 287 aa12.12□□□□□ -0.47
SSBP3-206ENST00000420121 AK8Q96MA6 479 aa12.12□□□□□ -0.47
SSBP3-206ENST00000420121 CLSTN3Q9BQT9 956 aa12.12□□□□□ -0.47
SSBP3-206ENST00000420121 MRPL4Q9BYD3 311 aaKnown RBP12.12□□□□□ -0.47
SSBP3-206ENST00000420121 BACH2Q9BYV9 841 aa12.12□□□□□ -0.47
SSBP3-206ENST00000420121 HAPLN2Q9GZV7 340 aa12.12□□□□□ -0.47
SSBP3-206ENST00000420121 GOLGA2P5Q9HBQ8 144 aa12.12□□□□□ -0.47
SSBP3-206ENST00000420121 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.12□□□□□ -0.47
SSBP3-206ENST00000420121 DAXXQ9UER7 740 aaPredicted RBP12.12□□□□□ -0.47
SSBP3-206ENST00000420121 RBM19Q9Y4C8 960 aaKnown RBP12.12□□□□□ -0.47
SSBP3-206ENST00000420121 PIEZO1Q92508 2521 aa12.11□□□□□ -0.47
SSBP3-206ENST00000420121 CCDC195A0A1B0GUA6 201 aa12.11□□□□□ -0.47
SSBP3-206ENST00000420121 SLC26A4O43511 780 aa12.11□□□□□ -0.47
SSBP3-206ENST00000420121 PDGFBP01127 241 aaPredicted RBP12.11□□□□□ -0.47
SSBP3-206ENST00000420121 MCF2P10911 925 aa12.11□□□□□ -0.47
SSBP3-206ENST00000420121 CLCNKBP51801 687 aa12.11□□□□□ -0.47
SSBP3-206ENST00000420121 NCKAP1LP55160 1127 aa12.11□□□□□ -0.47
SSBP3-206ENST00000420121 OSTNP61366 133 aa12.11□□□□□ -0.47
SSBP3-206ENST00000420121 PTPAQ15257 358 aa12.11□□□□□ -0.47
SSBP3-206ENST00000420121 UPP1Q16831 310 aa12.11□□□□□ -0.47
SSBP3-206ENST00000420121 ZNF568Q3ZCX4 644 aa12.11□□□□□ -0.47
SSBP3-206ENST00000420121 CCDC149Q6ZUS6 474 aa12.11□□□□□ -0.47
SSBP3-206ENST00000420121 ZBTB33Q86T24 672 aa12.11□□□□□ -0.47
SSBP3-206ENST00000420121 TDRD5Q8NAT2 981 aaKnown RBP12.11□□□□□ -0.47
SSBP3-206ENST00000420121 SPRYD3Q8NCJ5 442 aa12.11□□□□□ -0.47
SSBP3-206ENST00000420121 PBXIP1Q96AQ6 731 aa12.11□□□□□ -0.47
SSBP3-206ENST00000420121 SNX27Q96L92 541 aa12.11□□□□□ -0.47
SSBP3-206ENST00000420121 TTPALQ9BTX7 342 aa12.11□□□□□ -0.47
SSBP3-206ENST00000420121 WDR6Q9NNW5 1121 aaKnown RBP12.11□□□□□ -0.47
SSBP3-206ENST00000420121 KCND2Q9NZV8 630 aa12.11□□□□□ -0.47
SSBP3-206ENST00000420121 LIMD1Q9UGP4 676 aa12.11□□□□□ -0.47
SSBP3-206ENST00000420121 FBXW11Q9UKB1 542 aa12.11□□□□□ -0.47
SSBP3-206ENST00000420121 CIZ1Q9ULV3 898 aaPredicted RBP12.11□□□□□ -0.47
SSBP3-206ENST00000420121 SORCS3Q9UPU3 1222 aa12.11□□□□□ -0.47
SSBP3-206ENST00000420121 KCNE1P15382 129 aa12.1□□□□□ -0.47
SSBP3-206ENST00000420121 PLCG1P19174 1290 aa12.1□□□□□ -0.47
SSBP3-206ENST00000420121 FGFR3P22607 806 aa12.1□□□□□ -0.47
SSBP3-206ENST00000420121 ZNF131P52739 623 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms