RNA–Protein interactions for RNA: ENST00000420103.1

CHCHD4-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

TSL 3

Gene CHCHD4, Length 584 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-203ENST00000420103 KXD1Q9BQD3 176 aa12.98□□□□□ -0.33
CHCHD4-203ENST00000420103 PLA2G2FQ9BZM2 168 aa12.98□□□□□ -0.33
CHCHD4-203ENST00000420103 POLR3FQ9H1D9 316 aaPredicted RBP12.98□□□□□ -0.33
CHCHD4-203ENST00000420103 PARP2Q9UGN5 583 aa12.98□□□□□ -0.33
CHCHD4-203ENST00000420103 CDH7Q9ULB5 785 aa12.98□□□□□ -0.33
CHCHD4-203ENST00000420103 FANCMQ8IYD8 2048 aa12.98□□□□□ -0.33
CHCHD4-203ENST00000420103 TPRP12270 2363 aaKnown RBP12.98□□□□□ -0.33
CHCHD4-203ENST00000420103 NOTCH4Q99466 2003 aa12.97□□□□□ -0.33
CHCHD4-203ENST00000420103 A0A1B0GUA9 196 aa12.97□□□□□ -0.33
CHCHD4-203ENST00000420103 TADA2AO75478 443 aa12.97□□□□□ -0.33
CHCHD4-203ENST00000420103 KRT37O76014 449 aa12.97□□□□□ -0.33
CHCHD4-203ENST00000420103 FZD5Q13467 585 aa12.97□□□□□ -0.33
CHCHD4-203ENST00000420103 HSP90AA2PQ14568 343 aaPredicted RBP12.97□□□□□ -0.33
CHCHD4-203ENST00000420103 RSPO4Q2I0M5 234 aaPredicted RBP12.97□□□□□ -0.33
CHCHD4-203ENST00000420103 C8orf34Q49A92 452 aa12.97□□□□□ -0.33
CHCHD4-203ENST00000420103 SLC44A4Q53GD3 710 aa12.97□□□□□ -0.33
CHCHD4-203ENST00000420103 FAM171A1Q5VUB5 890 aa12.97□□□□□ -0.33
CHCHD4-203ENST00000420103 TSSK4Q6SA08 328 aa12.97□□□□□ -0.33
CHCHD4-203ENST00000420103 CD300LGQ6UXG3 332 aa12.97□□□□□ -0.33
CHCHD4-203ENST00000420103 CEP57Q86XR8 500 aa12.97□□□□□ -0.33
CHCHD4-203ENST00000420103 CCDC51Q96ER9 411 aa12.97□□□□□ -0.33
CHCHD4-203ENST00000420103 HINFPQ9BQA5 517 aa12.97□□□□□ -0.33
CHCHD4-203ENST00000420103 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.97□□□□□ -0.33
CHCHD4-203ENST00000420103 ANKEF1Q9NU02 776 aa12.97□□□□□ -0.33
CHCHD4-203ENST00000420103 KMT2BQ9UMN6 2715 aaPredicted RBP12.97□□□□□ -0.33
CHCHD4-203ENST00000420103 MTCL1Q9Y4B5 1905 aaKnown RBP12.97□□□□□ -0.33
CHCHD4-203ENST00000420103 KANSL1LA0AUZ9 987 aa12.96□□□□□ -0.33
CHCHD4-203ENST00000420103 DGAT1O75907 488 aa12.96□□□□□ -0.33
CHCHD4-203ENST00000420103 C1RP00736 705 aa12.96□□□□□ -0.33
CHCHD4-203ENST00000420103 C8AP07357 584 aa12.96□□□□□ -0.33
CHCHD4-203ENST00000420103 POU5F1BQ06416 359 aa12.96□□□□□ -0.33
CHCHD4-203ENST00000420103 GRIK3Q13003 919 aa12.96□□□□□ -0.33
CHCHD4-203ENST00000420103 MXD4Q14582 209 aaPredicted RBP12.96□□□□□ -0.33
CHCHD4-203ENST00000420103 PUM1Q14671 1186 aaKnown RBP eCLIP12.96□□□□□ -0.33
CHCHD4-203ENST00000420103 ZNF174Q15697 407 aa12.96□□□□□ -0.33
CHCHD4-203ENST00000420103 SLC27A1Q6PCB7 646 aa12.96□□□□□ -0.33
CHCHD4-203ENST00000420103 CATSPER3Q86XQ3 398 aa12.96□□□□□ -0.33
CHCHD4-203ENST00000420103 EXOC8Q8IYI6 725 aa12.96□□□□□ -0.33
CHCHD4-203ENST00000420103 GPR65Q8IYL9 337 aa12.96□□□□□ -0.33
CHCHD4-203ENST00000420103 ING5Q8WYH8 240 aa12.96□□□□□ -0.33
CHCHD4-203ENST00000420103 PIK3R5Q8WYR1 880 aa12.96□□□□□ -0.33
CHCHD4-203ENST00000420103 BSNDQ8WZ55 320 aa12.96□□□□□ -0.33
CHCHD4-203ENST00000420103 C8orf76Q96K31 380 aa12.96□□□□□ -0.33
CHCHD4-203ENST00000420103 CCDC43Q96MW1 224 aaKnown RBP12.96□□□□□ -0.33
CHCHD4-203ENST00000420103 CNTNAP3BQ96NU0 1288 aa12.96□□□□□ -0.33
CHCHD4-203ENST00000420103 CNTNAP3Q9BZ76 1288 aa12.96□□□□□ -0.33
CHCHD4-203ENST00000420103 TRIM6Q9C030 488 aaPredicted RBP12.96□□□□□ -0.33
CHCHD4-203ENST00000420103 POLD4Q9HCU8 107 aa12.96□□□□□ -0.33
CHCHD4-203ENST00000420103 SPATA6Q9NWH7 488 aaPredicted RBP12.96□□□□□ -0.33
CHCHD4-203ENST00000420103 SNTG2Q9NY99 539 aa12.96□□□□□ -0.33
CHCHD4-203ENST00000420103 DNMT3BQ9UBC3 853 aaKnown RBP12.96□□□□□ -0.33
CHCHD4-203ENST00000420103 DPP7Q9UHL4 492 aa12.96□□□□□ -0.33
CHCHD4-203ENST00000420103 POLIQ9UNA4 740 aa12.96□□□□□ -0.33
CHCHD4-203ENST00000420103 LIMCH1Q9UPQ0 1083 aa12.96□□□□□ -0.33
CHCHD4-203ENST00000420103 MYH15Q9Y2K3 1946 aa12.96□□□□□ -0.34
CHCHD4-203ENST00000420103 CACNA1BQ00975 2339 aa12.95□□□□□ -0.34
CHCHD4-203ENST00000420103 FAM170BA6NMN3 283 aa12.95□□□□□ -0.34
CHCHD4-203ENST00000420103 NR1I2O75469 434 aa12.95□□□□□ -0.34
CHCHD4-203ENST00000420103 TGM1P22735 817 aa12.95□□□□□ -0.34
CHCHD4-203ENST00000420103 TARSP26639 723 aaKnown RBP12.95□□□□□ -0.34
CHCHD4-203ENST00000420103 CSTF1Q05048 431 aaKnown RBP12.95□□□□□ -0.34
CHCHD4-203ENST00000420103 TFDP1Q14186 410 aa12.95□□□□□ -0.34
CHCHD4-203ENST00000420103 UBXN2BQ14CS0 331 aa12.95□□□□□ -0.34
CHCHD4-203ENST00000420103 MLF2Q15773 248 aaPredicted RBP12.95□□□□□ -0.34
CHCHD4-203ENST00000420103 PSMD5Q16401 504 aa12.95□□□□□ -0.34
CHCHD4-203ENST00000420103 ECM1Q16610 540 aa12.95□□□□□ -0.34
CHCHD4-203ENST00000420103 SLC5A9Q2M3M2 681 aa12.95□□□□□ -0.34
CHCHD4-203ENST00000420103 EEF1DP3Q658K8 133 aa12.95□□□□□ -0.34
CHCHD4-203ENST00000420103 NOSTRINQ8IVI9 506 aa12.95□□□□□ -0.34
CHCHD4-203ENST00000420103 NPAS3Q8IXF0 933 aa12.95□□□□□ -0.34
CHCHD4-203ENST00000420103 SLC7A14Q8TBB6 771 aa12.95□□□□□ -0.34
CHCHD4-203ENST00000420103 TTPALQ9BTX7 342 aa12.95□□□□□ -0.34
CHCHD4-203ENST00000420103 NFKBIZQ9BYH8 718 aa12.95□□□□□ -0.34
CHCHD4-203ENST00000420103 PDZD7Q9H5P4 517 aa12.95□□□□□ -0.34
CHCHD4-203ENST00000420103 CFAP47Q6ZTR5 3102 aa12.95□□□□□ -0.34
CHCHD4-203ENST00000420103 SF3B1O75533 1304 aaKnown RBP eCLIP12.94□□□□□ -0.34
CHCHD4-203ENST00000420103 ACACBO00763 2458 aa12.94□□□□□ -0.34
CHCHD4-203ENST00000420103 LRRIQ4A6NIV6 560 aa12.94□□□□□ -0.34
CHCHD4-203ENST00000420103 I3L4J1 428 aa12.94□□□□□ -0.34
CHCHD4-203ENST00000420103 RECQL4O94761 1208 aa12.94□□□□□ -0.34
CHCHD4-203ENST00000420103 OR52Z1P0C646 297 aa12.94□□□□□ -0.34
CHCHD4-203ENST00000420103 OR1D2P34982 312 aa12.94□□□□□ -0.34
CHCHD4-203ENST00000420103 TUSC3Q13454 348 aa12.94□□□□□ -0.34
CHCHD4-203ENST00000420103 PCBP1Q15365 356 aaKnown RBP eCLIP12.94□□□□□ -0.34
CHCHD4-203ENST00000420103 PPM1LQ5SGD2 360 aa12.94□□□□□ -0.34
CHCHD4-203ENST00000420103 AXDND1Q5T1B0 1012 aaPredicted RBP12.94□□□□□ -0.34
CHCHD4-203ENST00000420103 ELMSAN1Q6PJG2 1045 aa12.94□□□□□ -0.34
CHCHD4-203ENST00000420103 FZD8Q9H461 694 aa12.94□□□□□ -0.34
CHCHD4-203ENST00000420103 LTB4R2Q9NPC1 389 aa12.94□□□□□ -0.34
CHCHD4-203ENST00000420103 VWA8A3KMH1 1905 aa12.94□□□□□ -0.34
CHCHD4-203ENST00000420103 KINO60870 393 aaKnown RBP12.93□□□□□ -0.34
CHCHD4-203ENST00000420103 HNRNPA1P09651 372 aaKnown RBP eCLIP12.93□□□□□ -0.34
CHCHD4-203ENST00000420103 ATXN1P54253 815 aaKnown RBP12.93□□□□□ -0.34
CHCHD4-203ENST00000420103 RAB33AQ14088 237 aa12.93□□□□□ -0.34
CHCHD4-203ENST00000420103 SAFBQ15424 915 aaKnown RBP eCLIP12.93□□□□□ -0.34
CHCHD4-203ENST00000420103 GLRA4Q5JXX5 417 aa12.93□□□□□ -0.34
CHCHD4-203ENST00000420103 TTC38Q5R3I4 469 aa12.93□□□□□ -0.34
CHCHD4-203ENST00000420103 VARS2Q5ST30 1063 aaKnown RBP12.93□□□□□ -0.34
CHCHD4-203ENST00000420103 CDCA2Q69YH5 1023 aaPredicted RBP12.93□□□□□ -0.34
CHCHD4-203ENST00000420103 TANGO2Q6ICL3 276 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms