RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 OSMRQ99650 979 aa6.46□□□□□ -1.38
HMGB3-202ENST00000419110 ACO2Q99798 780 aaKnown RBP6.46□□□□□ -1.38
HMGB3-202ENST00000419110 FDXACB1Q9BRP7 624 aaPredicted RBP6.46□□□□□ -1.38
HMGB3-202ENST00000419110 CRACR2AQ9BSW2 395 aa6.46□□□□□ -1.38
HMGB3-202ENST00000419110 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.46□□□□□ -1.382e-6■■■■■ 36
HMGB3-202ENST00000419110 CDT1Q9H211 546 aa6.46□□□□□ -1.38
HMGB3-202ENST00000419110 GANQ9H2C0 597 aa6.46□□□□□ -1.38
HMGB3-202ENST00000419110 FZD8Q9H461 694 aa6.46□□□□□ -1.38
HMGB3-202ENST00000419110 DEF6Q9H4E7 631 aa6.46□□□□□ -1.38
HMGB3-202ENST00000419110 TMEM8AQ9HCN3 771 aa6.46□□□□□ -1.38
HMGB3-202ENST00000419110 LUC7LQ9NQ29 371 aaKnown RBP6.46□□□□□ -1.38
HMGB3-202ENST00000419110 HDAC6Q9UBN7 1215 aa6.46□□□□□ -1.38
HMGB3-202ENST00000419110 APEX2Q9UBZ4 518 aa6.46□□□□□ -1.38
HMGB3-202ENST00000419110 GTF2IRD1Q9UHL9 959 aa6.46□□□□□ -1.38
HMGB3-202ENST00000419110 FBXL5Q9UKA1 691 aa6.46□□□□□ -1.38
HMGB3-202ENST00000419110 PYCARDQ9ULZ3 195 aa6.46□□□□□ -1.38
HMGB3-202ENST00000419110 MYO6Q9UM54 1294 aa6.46□□□□□ -1.38
HMGB3-202ENST00000419110 GINS2Q9Y248 185 aa6.46□□□□□ -1.38
HMGB3-202ENST00000419110 TNFSF13BQ9Y275 285 aa6.46□□□□□ -1.38
HMGB3-202ENST00000419110 TRPV2Q9Y5S1 764 aa6.46□□□□□ -1.38
HMGB3-202ENST00000419110 LTBP2Q14767 1821 aa6.46□□□□□ -1.38
HMGB3-202ENST00000419110 SCN5AQ14524 2016 aa6.45□□□□□ -1.38
HMGB3-202ENST00000419110 A0A0B4J269 797 aa6.45□□□□□ -1.38
HMGB3-202ENST00000419110 A0A0U1RQG5 324 aaPredicted RBP6.45□□□□□ -1.38
HMGB3-202ENST00000419110 LRRC53A6NM62 1247 aa6.45□□□□□ -1.38
HMGB3-202ENST00000419110 LRRIQ3A6PVS8 624 aaPredicted RBP6.45□□□□□ -1.38
HMGB3-202ENST00000419110 KIF2AO00139 706 aaPredicted RBP6.45□□□□□ -1.38
HMGB3-202ENST00000419110 PMM2O15305 246 aa6.45□□□□□ -1.38
HMGB3-202ENST00000419110 TREHO43280 583 aa6.45□□□□□ -1.38
HMGB3-202ENST00000419110 ZNF500O60304 480 aaPredicted RBP6.45□□□□□ -1.38
HMGB3-202ENST00000419110 ZC3H11AO75152 810 aaKnown RBP eCLIP6.45□□□□□ -1.38
HMGB3-202ENST00000419110 TNNC2P02585 160 aa6.45□□□□□ -1.38
HMGB3-202ENST00000419110 EDN1P05305 212 aa6.45□□□□□ -1.38
HMGB3-202ENST00000419110 CCDC175P0C221 793 aa6.45□□□□□ -1.38
HMGB3-202ENST00000419110 CCDC172P0C7W6 258 aa6.45□□□□□ -1.38
HMGB3-202ENST00000419110 DARSP14868 501 aaKnown RBP6.45□□□□□ -1.38
HMGB3-202ENST00000419110 TNNI1P19237 187 aa6.45□□□□□ -1.38
HMGB3-202ENST00000419110 PROZP22891 400 aa6.45□□□□□ -1.38
HMGB3-202ENST00000419110 AXLP30530 894 aa6.45□□□□□ -1.38
HMGB3-202ENST00000419110 GCLMP48507 274 aa6.45□□□□□ -1.38
HMGB3-202ENST00000419110 PRSS12P56730 875 aa6.45□□□□□ -1.38
HMGB3-202ENST00000419110 POLR2FP61218 127 aaKnown RBP6.45□□□□□ -1.38
HMGB3-202ENST00000419110 CAP1Q01518 475 aa6.45□□□□□ -1.38
HMGB3-202ENST00000419110 KCNC4Q03721 635 aa6.45□□□□□ -1.38
HMGB3-202ENST00000419110 TMEM62Q0P6H9 643 aa6.45□□□□□ -1.38
HMGB3-202ENST00000419110 MEA1Q16626 185 aa6.45□□□□□ -1.38
HMGB3-202ENST00000419110 CBWD6Q4V339 395 aa6.45□□□□□ -1.38
HMGB3-202ENST00000419110 EPC2Q52LR7 807 aa6.45□□□□□ -1.38
HMGB3-202ENST00000419110 CBWD3Q5JTY5 395 aa6.45□□□□□ -1.38
HMGB3-202ENST00000419110 CBWD5Q5RIA9 395 aa6.45□□□□□ -1.38
HMGB3-202ENST00000419110 MARCH8Q5T0T0 291 aa6.45□□□□□ -1.38
HMGB3-202ENST00000419110 SFMBT2Q5VUG0 894 aa6.45□□□□□ -1.38
HMGB3-202ENST00000419110 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.45□□□□□ -1.38
HMGB3-202ENST00000419110 RUFY4Q6ZNE9 571 aa6.45□□□□□ -1.38
HMGB3-202ENST00000419110 RRAGAQ7L523 313 aa6.45□□□□□ -1.38
HMGB3-202ENST00000419110 ZBTB33Q86T24 672 aa6.45□□□□□ -1.38
HMGB3-202ENST00000419110 TMEM139Q8IV31 216 aa6.45□□□□□ -1.38
HMGB3-202ENST00000419110 WDR49Q8IV35 697 aa6.45□□□□□ -1.38
HMGB3-202ENST00000419110 HACE1Q8IYU2 909 aa6.45□□□□□ -1.38
HMGB3-202ENST00000419110 KIAA0319LQ8IZA0 1049 aa6.45□□□□□ -1.38
HMGB3-202ENST00000419110 CCDC155Q8N6L0 562 aa6.45□□□□□ -1.38
HMGB3-202ENST00000419110 FBXL13Q8NEE6 735 aa6.45□□□□□ -1.38
HMGB3-202ENST00000419110 KLHDC9Q8NEP7 349 aa6.45□□□□□ -1.38
HMGB3-202ENST00000419110 PARD3BQ8TEW8 1205 aa6.45□□□□□ -1.38
HMGB3-202ENST00000419110 DNAJB3Q8WWF6 145 aa6.45□□□□□ -1.38
HMGB3-202ENST00000419110 ZBTB10Q96DT7 871 aa6.45□□□□□ -1.38
HMGB3-202ENST00000419110 ANKRD36BP1Q96IX9 119 aa6.45□□□□□ -1.38
HMGB3-202ENST00000419110 ZNF668Q96K58 619 aaPredicted RBP6.45□□□□□ -1.38
HMGB3-202ENST00000419110 MFSD14AQ96MC6 490 aa6.45□□□□□ -1.38
HMGB3-202ENST00000419110 GLT1D1Q96MS3 346 aa6.45□□□□□ -1.38
HMGB3-202ENST00000419110 TSEN34Q9BSV6 310 aaKnown RBP6.45□□□□□ -1.38
HMGB3-202ENST00000419110 CCDC94Q9BW85 323 aaPredicted RBP6.45□□□□□ -1.38
HMGB3-202ENST00000419110 IRX2Q9BZI1 471 aaPredicted RBP6.45□□□□□ -1.38
HMGB3-202ENST00000419110 TRIM6Q9C030 488 aaPredicted RBP6.45□□□□□ -1.38
HMGB3-202ENST00000419110 PDZD7Q9H5P4 517 aa6.45□□□□□ -1.38
HMGB3-202ENST00000419110 RPF1Q9H9Y2 349 aaKnown RBP6.45□□□□□ -1.38
HMGB3-202ENST00000419110 IFT122Q9HBG6 1241 aa6.45□□□□□ -1.38
HMGB3-202ENST00000419110 NLRC4Q9NPP4 1024 aa6.45□□□□□ -1.38
HMGB3-202ENST00000419110 TOPORSQ9NS56 1045 aaPredicted RBP6.45□□□□□ -1.38
HMGB3-202ENST00000419110 AGPAT5Q9NUQ2 364 aa6.45□□□□□ -1.38
HMGB3-202ENST00000419110 PIN4Q9Y237 131 aaKnown RBP6.45□□□□□ -1.38
HMGB3-202ENST00000419110 FHOD1Q9Y613 1164 aa6.45□□□□□ -1.38
HMGB3-202ENST00000419110 SCN1AP35498 2009 aa6.45□□□□□ -1.38
HMGB3-202ENST00000419110 MYO16Q9Y6X6 1858 aa6.45□□□□□ -1.38
HMGB3-202ENST00000419110 PATJQ8NI35 1801 aa6.44□□□□□ -1.38
HMGB3-202ENST00000419110 A0A1W2PQ45 241 aaPredicted RBP6.44□□□□□ -1.38
HMGB3-202ENST00000419110 A0A1W2PQY0 241 aa6.44□□□□□ -1.38
HMGB3-202ENST00000419110 SOWAHDA6NJG2 315 aa6.44□□□□□ -1.38
HMGB3-202ENST00000419110 F8VZ95 297 aa6.44□□□□□ -1.38
HMGB3-202ENST00000419110 ABLIM1O14639 778 aa6.44□□□□□ -1.38
HMGB3-202ENST00000419110 EPHB6O15197 1021 aa6.44□□□□□ -1.38
HMGB3-202ENST00000419110 B4GALT5O43286 388 aa6.44□□□□□ -1.38
HMGB3-202ENST00000419110 CAND2O75155 1236 aa6.44□□□□□ -1.38
HMGB3-202ENST00000419110 PHACTR2O75167 634 aa6.44□□□□□ -1.38
HMGB3-202ENST00000419110 OFD1O75665 1012 aa6.44□□□□□ -1.38
HMGB3-202ENST00000419110 CTSHP09668 335 aa6.44□□□□□ -1.38
HMGB3-202ENST00000419110 CXCL8P10145 99 aa6.44□□□□□ -1.38
HMGB3-202ENST00000419110 UCHL3P15374 230 aa6.44□□□□□ -1.38
HMGB3-202ENST00000419110 FERP16591 822 aa6.44□□□□□ -1.38
HMGB3-202ENST00000419110 ARF4P18085 180 aaPredicted RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms