RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 MIIPQ5JXC2 388 aa4.8□□□□□ -1.64
HMGB3P20-201ENST00000417997 CREB3L3Q68CJ9 461 aa4.8□□□□□ -1.64
HMGB3P20-201ENST00000417997 SULT6B1Q6IMI4 303 aa4.8□□□□□ -1.64
HMGB3P20-201ENST00000417997 KIAA1841Q6NSI8 718 aa4.8□□□□□ -1.64
HMGB3P20-201ENST00000417997 FAM111BQ6SJ93 734 aa4.8□□□□□ -1.64
HMGB3P20-201ENST00000417997 UNQ6494/PRO21346Q6UXR6 183 aa4.8□□□□□ -1.64
HMGB3P20-201ENST00000417997 CLEC14AQ86T13 490 aa4.8□□□□□ -1.64
HMGB3P20-201ENST00000417997 WDR63Q8IWG1 891 aa4.8□□□□□ -1.64
HMGB3P20-201ENST00000417997 NIM1KQ8IY84 436 aa4.8□□□□□ -1.64
HMGB3P20-201ENST00000417997 IL17DQ8TAD2 202 aa4.8□□□□□ -1.64
HMGB3P20-201ENST00000417997 NINJ1Q92982 152 aa4.8□□□□□ -1.64
HMGB3P20-201ENST00000417997 NKD2Q969F2 451 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P20-201ENST00000417997 FERMT2Q96AC1 680 aa4.8□□□□□ -1.64
HMGB3P20-201ENST00000417997 ARL8AQ96BM9 186 aa4.8□□□□□ -1.64
HMGB3P20-201ENST00000417997 ZNF503Q96F45 646 aa4.8□□□□□ -1.64
HMGB3P20-201ENST00000417997 LTV1Q96GA3 475 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P20-201ENST00000417997 PLEKHF1Q96S99 279 aa4.8□□□□□ -1.64
HMGB3P20-201ENST00000417997 TCF25Q9BQ70 676 aa4.8□□□□□ -1.64
HMGB3P20-201ENST00000417997 NOL10Q9BSC4 688 aaKnown RBP4.8□□□□□ -1.64
HMGB3P20-201ENST00000417997 MYH16Q9H6N6 1097 aa4.8□□□□□ -1.64
HMGB3P20-201ENST00000417997 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.8□□□□□ -1.64
HMGB3P20-201ENST00000417997 IL23AQ9NPF7 189 aa4.8□□□□□ -1.64
HMGB3P20-201ENST00000417997 ING1Q9UK53 422 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P20-201ENST00000417997 WNK3Q9BYP7 1800 aa4.8□□□□□ -1.64
HMGB3P20-201ENST00000417997 COL18A1P39060 1754 aa4.8□□□□□ -1.64
HMGB3P20-201ENST00000417997 LTBP4Q8N2S1 1624 aa4.79□□□□□ -1.64
HMGB3P20-201ENST00000417997 COL22A1Q8NFW1 1626 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P20-201ENST00000417997 ABHD18Q0P651 414 aa4.79□□□□□ -1.64
HMGB3P20-201ENST00000417997 PCBP1Q15365 356 aaKnown RBP eCLIP4.79□□□□□ -1.64
HMGB3P20-201ENST00000417997 ELAVL1Q15717 326 aaKnown RBP4.79□□□□□ -1.64
HMGB3P20-201ENST00000417997 SPTY2D1Q68D10 685 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P20-201ENST00000417997 BRINP3Q76B58 766 aa4.79□□□□□ -1.64
HMGB3P20-201ENST00000417997 GSPT2Q8IYD1 628 aaKnown RBP4.79□□□□□ -1.64
HMGB3P20-201ENST00000417997 ANKRD35Q8N283 1001 aa4.79□□□□□ -1.64
HMGB3P20-201ENST00000417997 EFHBQ8N7U6 833 aa4.79□□□□□ -1.64
HMGB3P20-201ENST00000417997 UIMC1Q96RL1 719 aa4.79□□□□□ -1.64
HMGB3P20-201ENST00000417997 MTFR1LQ9H019 292 aa4.79□□□□□ -1.64
HMGB3P20-201ENST00000417997 ZMAT4Q9H898 229 aa4.79□□□□□ -1.64
HMGB3P20-201ENST00000417997 MSRAQ9UJ68 235 aa4.79□□□□□ -1.64
HMGB3P20-201ENST00000417997 REXO2Q9Y3B8 237 aaKnown RBP4.79□□□□□ -1.64
HMGB3P20-201ENST00000417997 PKD1L3Q7Z443 1732 aa4.79□□□□□ -1.64
HMGB3P20-201ENST00000417997 PLCH1Q4KWH8 1693 aa4.79□□□□□ -1.64
HMGB3P20-201ENST00000417997 KDRP35968 1356 aa4.78□□□□□ -1.64
HMGB3P20-201ENST00000417997 COL14A1Q05707 1796 aaKnown RBP4.78□□□□□ -1.64
HMGB3P20-201ENST00000417997 KDM3BQ7LBC6 1761 aa4.78□□□□□ -1.64
HMGB3P20-201ENST00000417997 IL16Q14005 1332 aa4.78□□□□□ -1.64
HMGB3P20-201ENST00000417997 SPATA31A3Q5VYP0 1347 aa4.78□□□□□ -1.64
HMGB3P20-201ENST00000417997 IGSF1Q8N6C5 1336 aa4.78□□□□□ -1.64
HMGB3P20-201ENST00000417997 FANCIQ9NVI1 1328 aa4.78□□□□□ -1.64
HMGB3P20-201ENST00000417997 A0A0A6YYJ9 748 aa4.78□□□□□ -1.64
HMGB3P20-201ENST00000417997 OPHN1O60890 802 aa4.78□□□□□ -1.64
HMGB3P20-201ENST00000417997 JUNP05412 331 aaKnown RBP4.78□□□□□ -1.64
HMGB3P20-201ENST00000417997 VSIG10L2P0DP72 767 aa4.78□□□□□ -1.64
HMGB3P20-201ENST00000417997 SCNN1BP51168 640 aa4.78□□□□□ -1.64
HMGB3P20-201ENST00000417997 IL2P60568 153 aa4.78□□□□□ -1.64
HMGB3P20-201ENST00000417997 DSG1Q02413 1049 aa4.78□□□□□ -1.64
HMGB3P20-201ENST00000417997 FHL2Q14192 279 aa4.78□□□□□ -1.64
HMGB3P20-201ENST00000417997 RRP1BQ14684 758 aaKnown RBP4.78□□□□□ -1.64
HMGB3P20-201ENST00000417997 IGFL4Q6B9Z1 124 aa4.78□□□□□ -1.64
HMGB3P20-201ENST00000417997 ESPNLQ6ZVH7 1005 aa4.78□□□□□ -1.64
HMGB3P20-201ENST00000417997 KANSL1Q7Z3B3 1105 aa4.78□□□□□ -1.64
HMGB3P20-201ENST00000417997 KIF18BQ86Y91 864 aa4.78□□□□□ -1.64
HMGB3P20-201ENST00000417997 PPM1KQ8N3J5 372 aa4.78□□□□□ -1.64
HMGB3P20-201ENST00000417997 MB21D1Q8N884 522 aa4.78□□□□□ -1.64
HMGB3P20-201ENST00000417997 IP6K1Q92551 441 aa4.78□□□□□ -1.64
HMGB3P20-201ENST00000417997 DDX17Q92841 729 aaKnown RBP4.78□□□□□ -1.64
HMGB3P20-201ENST00000417997 MIEF2Q96C03 454 aa4.78□□□□□ -1.64
HMGB3P20-201ENST00000417997 HIST1H2AHQ96KK5 128 aa4.78□□□□□ -1.64
HMGB3P20-201ENST00000417997 HIST1H2AJQ99878 128 aa4.78□□□□□ -1.64
HMGB3P20-201ENST00000417997 TARS2Q9BW92 718 aaKnown RBP4.78□□□□□ -1.64
HMGB3P20-201ENST00000417997 AURKAIP1Q9NWT8 199 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P20-201ENST00000417997 USP18Q9UMW8 372 aa4.78□□□□□ -1.64
HMGB3P20-201ENST00000417997 LAS1LQ9Y4W2 734 aaKnown RBP4.78□□□□□ -1.64
HMGB3P20-201ENST00000417997 COL16A1Q07092 1604 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P20-201ENST00000417997 SCN11AQ9UI33 1791 aa4.78□□□□□ -1.64
HMGB3P20-201ENST00000417997 RNF123Q5XPI4 1314 aa4.77□□□□□ -1.65
HMGB3P20-201ENST00000417997 FSBPO95073 299 aa4.77□□□□□ -1.65
HMGB3P20-201ENST00000417997 GCP02774 474 aa4.77□□□□□ -1.65
HMGB3P20-201ENST00000417997 MCM7P33993 719 aa4.77□□□□□ -1.65
HMGB3P20-201ENST00000417997 NPEPPSP55786 919 aa4.77□□□□□ -1.65
HMGB3P20-201ENST00000417997 GNAI1P63096 354 aa4.77□□□□□ -1.65
HMGB3P20-201ENST00000417997 TUBA3CQ13748 450 aa4.77□□□□□ -1.65
HMGB3P20-201ENST00000417997 MAN2A1Q16706 1144 aa4.77□□□□□ -1.65
HMGB3P20-201ENST00000417997 GAGE13Q4V321 117 aa4.77□□□□□ -1.65
HMGB3P20-201ENST00000417997 FKBP15Q5T1M5 1219 aa4.77□□□□□ -1.65
HMGB3P20-201ENST00000417997 TUBA3EQ6PEY2 450 aa4.77□□□□□ -1.65
HMGB3P20-201ENST00000417997 Q6ZRM9 215 aa4.77□□□□□ -1.65
HMGB3P20-201ENST00000417997 C11orf74Q86VG3 221 aa4.77□□□□□ -1.65
HMGB3P20-201ENST00000417997 JAZF1Q86VZ6 243 aa4.77□□□□□ -1.65
HMGB3P20-201ENST00000417997 ELOA2Q8IYF1 753 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P20-201ENST00000417997 AHI1Q8N157 1196 aa4.77□□□□□ -1.65
HMGB3P20-201ENST00000417997 OR2W6PQ8NHA6 318 aa4.77□□□□□ -1.65
HMGB3P20-201ENST00000417997 CACTINQ8WUQ7 758 aaKnown RBP4.77□□□□□ -1.65
HMGB3P20-201ENST00000417997 PGBD4Q96DM1 585 aa4.77□□□□□ -1.65
HMGB3P20-201ENST00000417997 FEZ1Q99689 392 aa4.77□□□□□ -1.65
HMGB3P20-201ENST00000417997 PITHD1Q9GZP4 211 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P20-201ENST00000417997 PCED1AQ9H1Q7 454 aa4.77□□□□□ -1.65
HMGB3P20-201ENST00000417997 EPC1Q9H2F5 836 aa4.77□□□□□ -1.65
HMGB3P20-201ENST00000417997 PARPBPQ9NWS1 579 aa4.77□□□□□ -1.65
HMGB3P20-201ENST00000417997 SIPA1L3O60292 1781 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms