RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-208	ENST00000417285	YARS	P54577	528 aa	Known RBP	27.81	■■■□□ 2.04
VEGFA-208	ENST00000417285	ZRSR1	Q15695	479 aa	Known RBP	27.81	■■■□□ 2.04
VEGFA-208	ENST00000417285	DCLRE1A	Q6PJP8	1040 aa		27.81	■■■□□ 2.04
VEGFA-208	ENST00000417285	SPATA31D4	Q6ZUB0	917 aa		27.81	■■■□□ 2.04
VEGFA-208	ENST00000417285	KCNK18	Q7Z418	384 aa		27.81	■■■□□ 2.04
VEGFA-208	ENST00000417285	PIK3R5	Q8WYR1	880 aa		27.81	■■■□□ 2.04
VEGFA-208	ENST00000417285	UROC1	Q96N76	676 aa		27.81	■■■□□ 2.04
VEGFA-208	ENST00000417285	CCDC94	Q9BW85	323 aa	Predicted RBP	27.81	■■■□□ 2.04
VEGFA-208	ENST00000417285	PTPRH	Q9HD43	1115 aa		27.81	■■■□□ 2.04
VEGFA-208	ENST00000417285	VWA3A	A6NCI4	1184 aa		27.8	■■■□□ 2.04
VEGFA-208	ENST00000417285	ASGR2	P07307	311 aa		27.8	■■■□□ 2.04
VEGFA-208	ENST00000417285	GRM5	P41594	1212 aa		27.8	■■■□□ 2.04
VEGFA-208	ENST00000417285	SMTN	P53814	917 aa		27.8	■■■□□ 2.04
VEGFA-208	ENST00000417285	NHLH1	Q02575	133 aa		27.8	■■■□□ 2.04
VEGFA-208	ENST00000417285	CUL4A	Q13619	759 aa		27.8	■■■□□ 2.04
VEGFA-208	ENST00000417285	RTP2	Q5QGT7	225 aa		27.8	■■■□□ 2.04
VEGFA-208	ENST00000417285	BRAP	Q7Z569	592 aa		27.8	■■■□□ 2.04
VEGFA-208	ENST00000417285	SYT2	Q8N9I0	419 aa	Predicted RBP	27.8	■■■□□ 2.04
VEGFA-208	ENST00000417285	FEZF2	Q8TBJ5	459 aa		27.8	■■■□□ 2.04
VEGFA-208	ENST00000417285	SPIRE2	Q8WWL2	714 aa		27.8	■■■□□ 2.04
VEGFA-208	ENST00000417285	SMG7	Q92540	1137 aa	Known RBP	27.8	■■■□□ 2.04
VEGFA-208	ENST00000417285	CDK5RAP3	Q96JB5	506 aa		27.8	■■■□□ 2.04
VEGFA-208	ENST00000417285	PPP1R10	Q96QC0	940 aa	Known RBP	27.8	■■■□□ 2.04
VEGFA-208	ENST00000417285	TCHP	Q9BT92	498 aa		27.8	■■■□□ 2.04
VEGFA-208	ENST00000417285	CXCL16	Q9H2A7	254 aa		27.8	■■■□□ 2.04
VEGFA-208	ENST00000417285	CACNG4	Q9UBN1	327 aa		27.8	■■■□□ 2.04
VEGFA-208	ENST00000417285	MYO10	Q9HD67	2058 aa		27.8	■■■□□ 2.04
VEGFA-208	ENST00000417285	TMEM189-UBE2V1	I3L0A0	370 aa		27.79	■■■□□ 2.04
VEGFA-208	ENST00000417285	RFPL2	O75678	378 aa		27.79	■■■□□ 2.04
VEGFA-208	ENST00000417285	MCF2	P10911	925 aa		27.79	■■■□□ 2.04
VEGFA-208	ENST00000417285	AVPR2	P30518	371 aa		27.79	■■■□□ 2.04
VEGFA-208	ENST00000417285	NUBP1	P53384	320 aa		27.79	■■■□□ 2.04
VEGFA-208	ENST00000417285	MAPK7	Q13164	816 aa		27.79	■■■□□ 2.04
VEGFA-208	ENST00000417285	PRSS55	Q6UWB4	352 aa	Predicted RBP	27.79	■■■□□ 2.04
VEGFA-208	ENST00000417285	CEP57	Q86XR8	500 aa		27.79	■■■□□ 2.04
VEGFA-208	ENST00000417285	LNX1	Q8TBB1	728 aa	Predicted RBP	27.79	■■■□□ 2.04
VEGFA-208	ENST00000417285	HASPIN	Q8TF76	798 aa		27.79	■■■□□ 2.04
VEGFA-208	ENST00000417285	AK8	Q96MA6	479 aa		27.79	■■■□□ 2.04
VEGFA-208	ENST00000417285	PRKD2	Q9BZL6	878 aa		27.79	■■■□□ 2.04
VEGFA-208	ENST00000417285	PIDD1	Q9HB75	910 aa		27.79	■■■□□ 2.04
VEGFA-208	ENST00000417285	IGSF9	Q9P2J2	1179 aa		27.79	■■■□□ 2.04
VEGFA-208	ENST00000417285	SMIM28	A0A1B0GU29	152 aa		27.78	■■■□□ 2.04
VEGFA-208	ENST00000417285	TRAPPC3	O43617	180 aa		27.78	■■■□□ 2.04
VEGFA-208	ENST00000417285	BMP15	O95972	392 aa		27.78	■■■□□ 2.04
VEGFA-208	ENST00000417285	RPL17	P18621	184 aa	Known RBP	27.78	■■■□□ 2.04
VEGFA-208	ENST00000417285	TDG	Q13569	410 aa		27.78	■■■□□ 2.04
VEGFA-208	ENST00000417285	XKR4	Q5GH76	650 aa		27.78	■■■□□ 2.04
VEGFA-208	ENST00000417285	IER5L	Q5T953	404 aa		27.78	■■■□□ 2.04
VEGFA-208	ENST00000417285	ALKAL1	Q6UXT8	129 aa		27.78	■■■□□ 2.04
VEGFA-208	ENST00000417285	ZNF707	Q96C28	371 aa	Predicted RBP	27.78	■■■□□ 2.04
VEGFA-208	ENST00000417285	DDX27	Q96GQ7	796 aa	Known RBP	27.78	■■■□□ 2.04
VEGFA-208	ENST00000417285	PNMA5	Q96PV4	448 aa		27.78	■■■□□ 2.04
VEGFA-208	ENST00000417285	CLSTN3	Q9BQT9	956 aa		27.78	■■■□□ 2.04
VEGFA-208	ENST00000417285	TARS2	Q9BW92	718 aa	Known RBP	27.78	■■■□□ 2.04
VEGFA-208	ENST00000417285	BACH2	Q9BYV9	841 aa		27.78	■■■□□ 2.04
VEGFA-208	ENST00000417285	SLC38A7	Q9NVC3	462 aa		27.78	■■■□□ 2.04
VEGFA-208	ENST00000417285	SFI1	A8K8P3	1242 aa		27.77	■■■□□ 2.04
VEGFA-208	ENST00000417285	ZMYND10	O75800	440 aa		27.77	■■■□□ 2.04
VEGFA-208	ENST00000417285	B3GAT3	O94766	335 aa		27.77	■■■□□ 2.04
VEGFA-208	ENST00000417285	PLS3	P13797	630 aa		27.77	■■■□□ 2.04
VEGFA-208	ENST00000417285	PDC	P20941	246 aa		27.77	■■■□□ 2.04
VEGFA-208	ENST00000417285	PTPN5	P54829	565 aa		27.77	■■■□□ 2.04
VEGFA-208	ENST00000417285	STRN3	Q13033	797 aa		27.77	■■■□□ 2.04
VEGFA-208	ENST00000417285	PSMD5	Q16401	504 aa		27.77	■■■□□ 2.04
VEGFA-208	ENST00000417285	ZNF568	Q3ZCX4	644 aa		27.77	■■■□□ 2.04
VEGFA-208	ENST00000417285	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	27.77	■■■□□ 2.04
VEGFA-208	ENST00000417285	TAS1R3	Q7RTX0	852 aa		27.77	■■■□□ 2.04
VEGFA-208	ENST00000417285	GLYCTK	Q8IVS8	523 aa		27.77	■■■□□ 2.04
VEGFA-208	ENST00000417285	ACAP3	Q96P50	834 aa		27.77	■■■□□ 2.04
VEGFA-208	ENST00000417285	CDT1	Q9H211	546 aa		27.77	■■■□□ 2.04
VEGFA-208	ENST00000417285	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	27.77	■■■□□ 2.04	4e-7	■■■■■ 28.5
VEGFA-208	ENST00000417285	CLUH	O75153	1309 aa		27.76	■■■□□ 2.03
VEGFA-208	ENST00000417285	SLC16A4	O15374	487 aa		27.76	■■■□□ 2.03
VEGFA-208	ENST00000417285	PLA2G4B	P0C869	781 aa		27.76	■■■□□ 2.03
VEGFA-208	ENST00000417285	MYB	P10242	640 aa		27.76	■■■□□ 2.03
VEGFA-208	ENST00000417285	PROZ	P22891	400 aa		27.76	■■■□□ 2.03
VEGFA-208	ENST00000417285	UPP1	Q16831	310 aa		27.76	■■■□□ 2.03
VEGFA-208	ENST00000417285	KCNK12	Q9HB15	430 aa		27.76	■■■□□ 2.03
VEGFA-208	ENST00000417285	VPS37C	A5D8V6	355 aa	Predicted RBP	27.75	■■■□□ 2.03
VEGFA-208	ENST00000417285		H0YCG3	227 aa		27.75	■■■□□ 2.03
VEGFA-208	ENST00000417285	FGFR3	P22607	806 aa		27.75	■■■□□ 2.03
VEGFA-208	ENST00000417285	GBP2	P32456	591 aa	Predicted RBP	27.75	■■■□□ 2.03
VEGFA-208	ENST00000417285	CLCNKB	P51801	687 aa		27.75	■■■□□ 2.03
VEGFA-208	ENST00000417285	SLC12A3	P55017	1021 aa		27.75	■■■□□ 2.03
VEGFA-208	ENST00000417285	GLRA4	Q5JXX5	417 aa		27.75	■■■□□ 2.03
VEGFA-208	ENST00000417285	MPZL3	Q6UWV2	235 aa		27.75	■■■□□ 2.03
VEGFA-208	ENST00000417285	NXPE3	Q969Y0	559 aa		27.75	■■■□□ 2.03
VEGFA-208	ENST00000417285	PLIN2	Q99541	437 aa		27.75	■■■□□ 2.03
VEGFA-208	ENST00000417285	IRF2BPL	Q9H1B7	796 aa		27.75	■■■□□ 2.03
VEGFA-208	ENST00000417285	TOM1L1	O75674	476 aa		27.74	■■■□□ 2.03
VEGFA-208	ENST00000417285	HNRNPA1	P09651	372 aa	Known RBP eCLIP	27.74	■■■□□ 2.03
VEGFA-208	ENST00000417285	KCNE1	P15382	129 aa		27.74	■■■□□ 2.03
VEGFA-208	ENST00000417285	UBA7	P41226	1012 aa		27.74	■■■□□ 2.03
VEGFA-208	ENST00000417285	OSTN	P61366	133 aa		27.74	■■■□□ 2.03
VEGFA-208	ENST00000417285	TMEM119	Q4V9L6	283 aa		27.74	■■■□□ 2.03
VEGFA-208	ENST00000417285	LIN9	Q5TKA1	542 aa		27.74	■■■□□ 2.03
VEGFA-208	ENST00000417285	RTL10	Q7L3V2	364 aa		27.74	■■■□□ 2.03
VEGFA-208	ENST00000417285	TMEM161B	Q8NDZ6	487 aa		27.74	■■■□□ 2.03
VEGFA-208	ENST00000417285	CALML4	Q96GE6	196 aa		27.74	■■■□□ 2.03
VEGFA-208	ENST00000417285	LARS	Q9P2J5	1176 aa	Known RBP	27.74	■■■□□ 2.03

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