RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 GFPT2O94808 682 aa18.37■□□□□ 0.53
CALD1-204ENST00000417172 VNN1O95497 513 aa18.37■□□□□ 0.53
CALD1-204ENST00000417172 C4BPAP04003 597 aaKnown RBP18.37■□□□□ 0.53
CALD1-204ENST00000417172 GNAT1P11488 350 aa18.37■□□□□ 0.53
CALD1-204ENST00000417172 DARSP14868 501 aaKnown RBP18.37■□□□□ 0.53
CALD1-204ENST00000417172 CST5P28325 142 aaPredicted RBP18.37■□□□□ 0.53
CALD1-204ENST00000417172 HOXA11P31270 313 aaPredicted RBP18.37■□□□□ 0.53
CALD1-204ENST00000417172 CETN1Q12798 172 aa18.37■□□□□ 0.53
CALD1-204ENST00000417172 SNX17Q15036 470 aa18.37■□□□□ 0.53
CALD1-204ENST00000417172 ASIC2Q16515 512 aa18.37■□□□□ 0.53
CALD1-204ENST00000417172 IRF2BP2Q7Z5L9 587 aa18.37■□□□□ 0.53
CALD1-204ENST00000417172 USP37Q86T82 979 aa18.37■□□□□ 0.53
CALD1-204ENST00000417172 SLAIN1Q8ND83 568 aa18.37■□□□□ 0.53
CALD1-204ENST00000417172 LZTFL1Q9NQ48 299 aa18.37■□□□□ 0.53
CALD1-204ENST00000417172 RAB20Q9NX57 234 aa18.37■□□□□ 0.53
CALD1-204ENST00000417172 AIPL1Q9NZN9 384 aa18.37■□□□□ 0.53
CALD1-204ENST00000417172 COQ4Q9Y3A0 265 aa18.37■□□□□ 0.53
CALD1-204ENST00000417172 GTF2H1P32780 548 aa18.36■□□□□ 0.53
CALD1-204ENST00000417172 BIRC3Q13489 604 aa18.36■□□□□ 0.53
CALD1-204ENST00000417172 ZACNQ401N2 412 aa18.36■□□□□ 0.53
CALD1-204ENST00000417172 LHX8Q68G74 356 aa18.36■□□□□ 0.53
CALD1-204ENST00000417172 CATSPER4Q7RTX7 472 aa18.36■□□□□ 0.53
CALD1-204ENST00000417172 SYN2Q92777 582 aaPredicted RBP18.36■□□□□ 0.53
CALD1-204ENST00000417172 CCDC42Q96M95 316 aa18.36■□□□□ 0.53
CALD1-204ENST00000417172 MTMR12Q9C0I1 747 aa18.36■□□□□ 0.53
CALD1-204ENST00000417172 A0A1B0GUA9 196 aa18.35■□□□□ 0.53
CALD1-204ENST00000417172 ZSCAN12O43309 604 aa18.35■□□□□ 0.53
CALD1-204ENST00000417172 STAG3L1P0CL83 205 aa18.35■□□□□ 0.53
CALD1-204ENST00000417172 KIF11P52732 1056 aa18.35■□□□□ 0.53
CALD1-204ENST00000417172 SPOPLQ6IQ16 392 aa18.35■□□□□ 0.53
CALD1-204ENST00000417172 EFCAB13Q8IY85 973 aa18.35■□□□□ 0.53
CALD1-204ENST00000417172 PPM1KQ8N3J5 372 aa18.35■□□□□ 0.53
CALD1-204ENST00000417172 TATDN2Q93075 761 aa18.35■□□□□ 0.53
CALD1-204ENST00000417172 KREMEN1Q96MU8 473 aa18.35■□□□□ 0.53
CALD1-204ENST00000417172 STK33Q9BYT3 514 aa18.35■□□□□ 0.53
CALD1-204ENST00000417172 NUCKS1Q9H1E3 243 aaKnown RBP18.35■□□□□ 0.53
CALD1-204ENST00000417172 HAUS4Q9H6D7 363 aa18.35■□□□□ 0.53
CALD1-204ENST00000417172 TRIM10Q9UDY6 481 aa18.35■□□□□ 0.53
CALD1-204ENST00000417172 HLA-DRAP01903 254 aa18.35■□□□□ 0.53
CALD1-204ENST00000417172 SERPING1P05155 500 aa18.35■□□□□ 0.53
CALD1-204ENST00000417172 CTSHP09668 335 aa18.35■□□□□ 0.53
CALD1-204ENST00000417172 TNNT1P13805 278 aa18.35■□□□□ 0.53
CALD1-204ENST00000417172 EIF4BP23588 611 aaKnown RBP18.35■□□□□ 0.53
CALD1-204ENST00000417172 PIK3CAP42336 1068 aa18.35■□□□□ 0.53
CALD1-204ENST00000417172 ACLYP53396 1101 aa18.35■□□□□ 0.53
CALD1-204ENST00000417172 GFPT1Q06210 699 aaPredicted RBP18.35■□□□□ 0.53
CALD1-204ENST00000417172 ENPEPQ07075 957 aa18.35■□□□□ 0.53
CALD1-204ENST00000417172 KLHL30Q0D2K2 578 aa18.35■□□□□ 0.53
CALD1-204ENST00000417172 PTPN14Q15678 1187 aa18.35■□□□□ 0.53
CALD1-204ENST00000417172 ASTE1Q2TB18 679 aaPredicted RBP18.35■□□□□ 0.53
CALD1-204ENST00000417172 SLC9C1Q4G0N8 1177 aa18.35■□□□□ 0.53
CALD1-204ENST00000417172 RNF180Q86T96 592 aa18.35■□□□□ 0.53
CALD1-204ENST00000417172 VTI1AQ96AJ9 217 aa18.35■□□□□ 0.53
CALD1-204ENST00000417172 EIF2AQ9BY44 585 aaKnown RBP18.35■□□□□ 0.53
CALD1-204ENST00000417172 IRX2Q9BZI1 471 aaPredicted RBP18.35■□□□□ 0.53
CALD1-204ENST00000417172 DEF6Q9H4E7 631 aa18.35■□□□□ 0.53
CALD1-204ENST00000417172 HMX1Q9NP08 348 aaPredicted RBP18.35■□□□□ 0.53
CALD1-204ENST00000417172 RCCD1A6NED2 376 aa18.34■□□□□ 0.53
CALD1-204ENST00000417172 FOXN3O00409 490 aaPredicted RBP18.34■□□□□ 0.53
CALD1-204ENST00000417172 NPTXRO95502 500 aa18.34■□□□□ 0.53
CALD1-204ENST00000417172 MCF2P10911 925 aa18.34■□□□□ 0.53
CALD1-204ENST00000417172 CYLC1P35663 651 aaPredicted RBP18.34■□□□□ 0.53
CALD1-204ENST00000417172 PTK2Q05397 1052 aa18.34■□□□□ 0.53
CALD1-204ENST00000417172 CCDC170Q8IYT3 715 aa18.34■□□□□ 0.53
CALD1-204ENST00000417172 HELQQ8TDG4 1101 aa18.34■□□□□ 0.53
CALD1-204ENST00000417172 ARID3AQ99856 593 aa18.34■□□□□ 0.53
CALD1-204ENST00000417172 OSBPL7Q9BZF2 842 aa18.34■□□□□ 0.53
CALD1-204ENST00000417172 CXCL16Q9H2A7 254 aa18.34■□□□□ 0.53
CALD1-204ENST00000417172 FAM170AA1A519 330 aa18.33■□□□□ 0.53
CALD1-204ENST00000417172 EVI5O60447 810 aa18.33■□□□□ 0.53
CALD1-204ENST00000417172 SOX5P35711 763 aa18.33■□□□□ 0.53
CALD1-204ENST00000417172 ZNF571Q7Z3V5 609 aaPredicted RBP18.33■□□□□ 0.53
CALD1-204ENST00000417172 PCSK9Q8NBP7 692 aaKnown RBP18.33■□□□□ 0.53
CALD1-204ENST00000417172 DHX38Q92620 1227 aaKnown RBP18.33■□□□□ 0.53
CALD1-204ENST00000417172 RPF1Q9H9Y2 349 aaKnown RBP18.33■□□□□ 0.53
CALD1-204ENST00000417172 TRMT13Q9NUP7 481 aaKnown RBP18.33■□□□□ 0.53
CALD1-204ENST00000417172 HES2Q9Y543 173 aa18.33■□□□□ 0.53
CALD1-204ENST00000417172 CDY2AQ9Y6F7 541 aa18.33■□□□□ 0.53
CALD1-204ENST00000417172 LACTBL1A8MY62 500 aa18.33■□□□□ 0.52
CALD1-204ENST00000417172 EIF3CLB5ME19 914 aaKnown RBP18.33■□□□□ 0.52
CALD1-204ENST00000417172 FANCGO15287 622 aa18.33■□□□□ 0.52
CALD1-204ENST00000417172 AKR1B10O60218 316 aa18.33■□□□□ 0.52
CALD1-204ENST00000417172 OFD1O75665 1012 aa18.33■□□□□ 0.52
CALD1-204ENST00000417172 NFICP08651 508 aa18.33■□□□□ 0.52
CALD1-204ENST00000417172 STAT1P42224 750 aa18.33■□□□□ 0.52
CALD1-204ENST00000417172 ARHGAP25P42331 645 aa18.33■□□□□ 0.52
CALD1-204ENST00000417172 TFAMQ00059 246 aaKnown RBP18.33■□□□□ 0.52
CALD1-204ENST00000417172 MAPK8IP2Q13387 824 aaPredicted RBP18.33■□□□□ 0.52
CALD1-204ENST00000417172 TAF2Q6P1X5 1199 aa18.33■□□□□ 0.52
CALD1-204ENST00000417172 SERINC5Q86VE9 423 aa18.33■□□□□ 0.52
CALD1-204ENST00000417172 DNAAF5Q86Y56 855 aa18.33■□□□□ 0.52
CALD1-204ENST00000417172 WDR49Q8IV35 697 aa18.33■□□□□ 0.52
CALD1-204ENST00000417172 ZNF592Q92610 1267 aa18.33■□□□□ 0.52
CALD1-204ENST00000417172 EIF3CQ99613 913 aaKnown RBP18.33■□□□□ 0.52
CALD1-204ENST00000417172 BEGAINQ9BUH8 593 aa18.33■□□□□ 0.52
CALD1-204ENST00000417172 MYO6Q9UM54 1294 aa18.33■□□□□ 0.52
CALD1-204ENST00000417172 UMODL1Q5DID0 1318 aa18.32■□□□□ 0.52
CALD1-204ENST00000417172 RALGAPA2Q2PPJ7 1873 aa18.32■□□□□ 0.52
CALD1-204ENST00000417172 CCP110O43303 1012 aa18.32■□□□□ 0.52
CALD1-204ENST00000417172 CST3P01034 146 aaPredicted RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms