RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 PCDHB12Q9Y5F1 795 aa10.05□□□□□ -0.8
CHRNA1-206ENST00000416004 CARNS1A5YM72 827 aa10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 LGALS16A8MUM7 142 aa10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 ANKRD63C9JTQ0 380 aa10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 H3BNC9 293 aa10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 FGFR1OPO95684 399 aaKnown RBP10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 NAMPTP43490 491 aa10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 PAN2Q504Q3 1202 aaKnown RBP10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 TJAP1Q5JTD0 557 aa10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 CEP135Q66GS9 1140 aa10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 SLC39A4Q6P5W5 647 aa10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 CATSPER4Q7RTX7 472 aa10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 MAP4K3Q8IVH8 894 aa10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 SYCP3Q8IZU3 236 aa10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 LINC01465Q8N7H1 131 aa10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 MRPL38Q96DV4 380 aaKnown RBP10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 IFT74Q96LB3 600 aa10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 OSBPL7Q9BZF2 842 aa10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 CDHR5Q9HBB8 845 aa10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 A0A087WZ62 844 aa10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 LRRIQ4A6NIV6 560 aa10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 TBKBP1A7MCY6 615 aa10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 CETN3O15182 167 aa10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 NCK2O43639 380 aa10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 ERLIN2O94905 339 aa10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 EDN1P05305 212 aa10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 ADSSP30520 456 aa10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 BMPR1AP36894 532 aa10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 PHKA2P46019 1235 aa10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 RAB27AP51159 221 aa10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 CYP2J2P51589 502 aa10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 LAMTOR4Q0VGL1 99 aa10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 BMS1Q14692 1282 aaKnown RBP10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 PCBP1Q15365 356 aaKnown RBP eCLIP10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 NFIL3Q16649 462 aa10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 TWF2Q6IBS0 349 aaKnown RBP10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 HS2ST1Q7LGA3 356 aa10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 SRGAP1Q7Z6B7 1085 aa10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 TRIM59Q8IWR1 403 aa10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 RNF169Q8NCN4 708 aa10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 ZSWIM2Q8NEG5 633 aa10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 ANKRD20A12PQ8NF67 263 aa10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 TMEM40Q8WWA1 233 aa10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 HLA-CQ95604 372 aa10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 ZNF689Q96CS4 500 aaPredicted RBP10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 ZNF668Q96K58 619 aaPredicted RBP10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 FDXACB1Q9BRP7 624 aaPredicted RBP10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 CBWD1Q9BRT8 395 aa10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 ADAMTS10Q9H324 1103 aa10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 KCNF1Q9H3M0 494 aa10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 TMEM206Q9H813 350 aa10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 DMAC2Q9NW81 257 aa10.04□□□□□ -0.8
CHRNA1-206ENST00000416004 RBAK-RBAKDNI3L0D1 243 aa10.03□□□□□ -0.8
CHRNA1-206ENST00000416004 EOMESO95936 686 aa10.03□□□□□ -0.8
CHRNA1-206ENST00000416004 TPM3P06753 285 aa10.03□□□□□ -0.8
CHRNA1-206ENST00000416004 MARSP56192 900 aaKnown RBP10.03□□□□□ -0.8
CHRNA1-206ENST00000416004 UBXN1Q04323 297 aa10.03□□□□□ -0.8
CHRNA1-206ENST00000416004 GOLGA8FQ08AF8 430 aa10.03□□□□□ -0.8
CHRNA1-206ENST00000416004 GOLGA8DPQ0D2H9 430 aa10.03□□□□□ -0.8
CHRNA1-206ENST00000416004 TBX2Q13207 712 aaPredicted RBP10.03□□□□□ -0.8
CHRNA1-206ENST00000416004 CCDC40Q4G0X9 1142 aa10.03□□□□□ -0.8
CHRNA1-206ENST00000416004 FILIP1LQ4L180 1135 aa10.03□□□□□ -0.8
CHRNA1-206ENST00000416004 ARMCX5Q6P1M9 558 aa10.03□□□□□ -0.8
CHRNA1-206ENST00000416004 DEPTORQ8TB45 409 aa10.03□□□□□ -0.8
CHRNA1-206ENST00000416004 CLP1Q92989 425 aaKnown RBP10.03□□□□□ -0.8
CHRNA1-206ENST00000416004 HVCN1Q96D96 273 aa10.03□□□□□ -0.8
CHRNA1-206ENST00000416004 PGBD4Q96DM1 585 aa10.03□□□□□ -0.8
CHRNA1-206ENST00000416004 BORCS6Q96GS4 357 aa10.03□□□□□ -0.8
CHRNA1-206ENST00000416004 MRPL9Q9BYD2 267 aaKnown RBP10.03□□□□□ -0.8
CHRNA1-206ENST00000416004 TMX1Q9H3N1 280 aa10.03□□□□□ -0.8
CHRNA1-206ENST00000416004 PCIF1Q9H4Z3 704 aa10.03□□□□□ -0.8
CHRNA1-206ENST00000416004 PIN4Q9Y237 131 aaKnown RBP10.03□□□□□ -0.8
CHRNA1-206ENST00000416004 FNDC1Q4ZHG4 1894 aaPredicted RBP10.02□□□□□ -0.8
CHRNA1-206ENST00000416004 EPOPA6NHQ4 379 aa10.02□□□□□ -0.8
CHRNA1-206ENST00000416004 TTLL13PA6NNM8 815 aa10.02□□□□□ -0.8
CHRNA1-206ENST00000416004 C9IYK1 514 aa10.02□□□□□ -0.8
CHRNA1-206ENST00000416004 C5orf67F2Z3F1 127 aa10.02□□□□□ -0.8
CHRNA1-206ENST00000416004 PES1O00541 588 aaKnown RBP10.02□□□□□ -0.8
CHRNA1-206ENST00000416004 ARHGEF15O94989 841 aa10.02□□□□□ -0.8
CHRNA1-206ENST00000416004 GNA14O95837 355 aa10.02□□□□□ -0.8
CHRNA1-206ENST00000416004 SRGAP2CP0DJJ0 459 aa10.02□□□□□ -0.8
CHRNA1-206ENST00000416004 LAG3P18627 525 aa10.02□□□□□ -0.8
CHRNA1-206ENST00000416004 RPL13P26373 211 aaKnown RBP10.02□□□□□ -0.8
CHRNA1-206ENST00000416004 KLK7P49862 253 aa10.02□□□□□ -0.8
CHRNA1-206ENST00000416004 LRMPQ12912 555 aa10.02□□□□□ -0.8
CHRNA1-206ENST00000416004 PPP2R5AQ15172 486 aa10.02□□□□□ -0.8
CHRNA1-206ENST00000416004 MAN2A1Q16706 1144 aa10.02□□□□□ -0.8
CHRNA1-206ENST00000416004 VWA3BQ502W6 1294 aa10.02□□□□□ -0.8
CHRNA1-206ENST00000416004 SPECC1LQ69YQ0 1117 aa10.02□□□□□ -0.8
CHRNA1-206ENST00000416004 RTN4RL1Q86UN2 441 aaPredicted RBP10.02□□□□□ -0.8
CHRNA1-206ENST00000416004 HACE1Q8IYU2 909 aa10.02□□□□□ -0.8
CHRNA1-206ENST00000416004 RNF149Q8NC42 400 aa10.02□□□□□ -0.8
CHRNA1-206ENST00000416004 GOLGA5Q8TBA6 731 aa10.02□□□□□ -0.8
CHRNA1-206ENST00000416004 CACTINQ8WUQ7 758 aaKnown RBP10.02□□□□□ -0.8
CHRNA1-206ENST00000416004 LINC01599Q8WXQ3 324 aa10.02□□□□□ -0.8
CHRNA1-206ENST00000416004 KCNN1Q92952 543 aa10.02□□□□□ -0.8
CHRNA1-206ENST00000416004 TMEM117Q9H0C3 514 aa10.02□□□□□ -0.8
CHRNA1-206ENST00000416004 NDST4Q9H3R1 872 aa10.02□□□□□ -0.8
CHRNA1-206ENST00000416004 NSUN3Q9H649 340 aaKnown RBP10.02□□□□□ -0.8
CHRNA1-206ENST00000416004 PUF60Q9UHX1 559 aaKnown RBP10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms