RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 OSTNP61366 133 aa27.4■■□□□ 1.98
HLA-C-204ENST00000415537 SIGLEC14Q08ET2 396 aa27.4■■□□□ 1.98
HLA-C-204ENST00000415537 ELAVL2Q12926 359 aaKnown RBP27.4■■□□□ 1.98
HLA-C-204ENST00000415537 SF3A1Q15459 793 aaKnown RBP27.4■■□□□ 1.98
HLA-C-204ENST00000415537 NAB2Q15742 525 aa27.4■■□□□ 1.98
HLA-C-204ENST00000415537 GLRA4Q5JXX5 417 aa27.4■■□□□ 1.98
HLA-C-204ENST00000415537 FAM171A1Q5VUB5 890 aa27.4■■□□□ 1.98
HLA-C-204ENST00000415537 CCDC149Q6ZUS6 474 aa27.4■■□□□ 1.98
HLA-C-204ENST00000415537 SPIRE2Q8WWL2 714 aa27.4■■□□□ 1.98
HLA-C-204ENST00000415537 TTPALQ9BTX7 342 aa27.4■■□□□ 1.98
HLA-C-204ENST00000415537 BACH2Q9BYV9 841 aa27.4■■□□□ 1.98
HLA-C-204ENST00000415537 PTPRHQ9HD43 1115 aa27.4■■□□□ 1.98
HLA-C-204ENST00000415537 TECTAO75443 2155 aa27.4■■□□□ 1.98
HLA-C-204ENST00000415537 DENND4AQ7Z401 1863 aa27.39■■□□□ 1.98
HLA-C-204ENST00000415537 CCDC195A0A1B0GUA6 201 aa27.39■■□□□ 1.98
HLA-C-204ENST00000415537 C1RP00736 705 aa27.39■■□□□ 1.98
HLA-C-204ENST00000415537 LONP1P36776 959 aaKnown RBP27.39■■□□□ 1.98
HLA-C-204ENST00000415537 MPZL3Q6UWV2 235 aa27.39■■□□□ 1.98
HLA-C-204ENST00000415537 CEP120Q8N960 986 aa27.39■■□□□ 1.98
HLA-C-204ENST00000415537 CMASQ8NFW8 434 aaPredicted RBP27.39■■□□□ 1.98
HLA-C-204ENST00000415537 HDAC7Q8WUI4 952 aa27.39■■□□□ 1.98
HLA-C-204ENST00000415537 PBXIP1Q96AQ6 731 aa27.39■■□□□ 1.98
HLA-C-204ENST00000415537 ACSF2Q96CM8 615 aaPredicted RBP27.39■■□□□ 1.98
HLA-C-204ENST00000415537 PPP1R10Q96QC0 940 aaKnown RBP27.39■■□□□ 1.98
HLA-C-204ENST00000415537 PLEKHA4Q9H4M7 779 aa27.39■■□□□ 1.98
HLA-C-204ENST00000415537 LARSQ9P2J5 1176 aaKnown RBP27.39■■□□□ 1.98
HLA-C-204ENST00000415537 CITO14578 2027 aa27.39■■□□□ 1.98
HLA-C-204ENST00000415537 SPATA31D3P0C874 917 aa27.38■■□□□ 1.97
HLA-C-204ENST00000415537 MYBP10242 640 aa27.38■■□□□ 1.97
HLA-C-204ENST00000415537 MCF2P10911 925 aa27.38■■□□□ 1.97
HLA-C-204ENST00000415537 RPL17P18621 184 aaKnown RBP27.38■■□□□ 1.97
HLA-C-204ENST00000415537 RTP2Q5QGT7 225 aa27.38■■□□□ 1.97
HLA-C-204ENST00000415537 PRSS55Q6UWB4 352 aaPredicted RBP27.38■■□□□ 1.97
HLA-C-204ENST00000415537 SPATA31D4Q6ZUB0 917 aa27.38■■□□□ 1.97
HLA-C-204ENST00000415537 BMP8AQ7Z5Y6 402 aa27.38■■□□□ 1.97
HLA-C-204ENST00000415537 ZDHHC14Q8IZN3 488 aa27.38■■□□□ 1.97
HLA-C-204ENST00000415537 UROC1Q96N76 676 aa27.38■■□□□ 1.97
HLA-C-204ENST00000415537 ACAP3Q96P50 834 aa27.38■■□□□ 1.97
HLA-C-204ENST00000415537 NPHP3-ACAD11A0A0J9YXS1 232 aa27.37■■□□□ 1.97
HLA-C-204ENST00000415537 H0YCG3 227 aa27.37■■□□□ 1.97
HLA-C-204ENST00000415537 TGM5O43548 720 aa27.37■■□□□ 1.97
HLA-C-204ENST00000415537 TRIOO75962 3097 aa27.37■■□□□ 1.97
HLA-C-204ENST00000415537 B3GAT3O94766 335 aa27.37■■□□□ 1.97
HLA-C-204ENST00000415537 HARSP12081 509 aaKnown RBP27.37■■□□□ 1.97
HLA-C-204ENST00000415537 CACNB1Q02641 598 aaPredicted RBP27.37■■□□□ 1.97
HLA-C-204ENST00000415537 MTMR3Q13615 1198 aa27.37■■□□□ 1.97
HLA-C-204ENST00000415537 DHX8Q14562 1220 aaKnown RBP27.37■■□□□ 1.97
HLA-C-204ENST00000415537 PDXDC1Q6P996 788 aa27.37■■□□□ 1.97
HLA-C-204ENST00000415537 CYP26C1Q6V0L0 522 aa27.37■■□□□ 1.97
HLA-C-204ENST00000415537 OTOP3Q7RTS5 596 aa27.37■■□□□ 1.97
HLA-C-204ENST00000415537 KREMEN2Q8NCW0 462 aa27.37■■□□□ 1.97
HLA-C-204ENST00000415537 TMEM161BQ8NDZ6 487 aa27.37■■□□□ 1.97
HLA-C-204ENST00000415537 FEZF2Q8TBJ5 459 aa27.37■■□□□ 1.97
HLA-C-204ENST00000415537 LIMD1Q9UGP4 676 aa27.37■■□□□ 1.97
HLA-C-204ENST00000415537 SORCS3Q9UPU3 1222 aa27.37■■□□□ 1.97
HLA-C-204ENST00000415537 SMIM28A0A1B0GU29 152 aa27.36■■□□□ 1.97
HLA-C-204ENST00000415537 PROZP22891 400 aa27.36■■□□□ 1.97
HLA-C-204ENST00000415537 CLCNKBP51801 687 aa27.36■■□□□ 1.97
HLA-C-204ENST00000415537 PSMD5Q16401 504 aa27.36■■□□□ 1.97
HLA-C-204ENST00000415537 DCLRE1AQ6PJP8 1040 aa27.36■■□□□ 1.97
HLA-C-204ENST00000415537 GPBP1Q86WP2 473 aa27.36■■□□□ 1.97
HLA-C-204ENST00000415537 SLC38A7Q9NVC3 462 aa27.36■■□□□ 1.97
HLA-C-204ENST00000415537 ANKFY1Q9P2R3 1169 aa27.36■■□□□ 1.97
HLA-C-204ENST00000415537 ODF2LQ9ULJ1 636 aa27.36■■□□□ 1.97
HLA-C-204ENST00000415537 TMEM189-UBE2V1I3L0A0 370 aa27.35■■□□□ 1.97
HLA-C-204ENST00000415537 TOM1L1O75674 476 aa27.35■■□□□ 1.97
HLA-C-204ENST00000415537 MAPTP10636 758 aaKnown RBP27.35■■□□□ 1.97
HLA-C-204ENST00000415537 MATR3P43243 847 aaKnown RBP eCLIP27.35■■□□□ 1.97
HLA-C-204ENST00000415537 KARSQ15046 597 aaKnown RBP27.35■■□□□ 1.97
HLA-C-204ENST00000415537 ARSHQ5FYA8 562 aa27.35■■□□□ 1.97
HLA-C-204ENST00000415537 ALKAL1Q6UXT8 129 aa27.35■■□□□ 1.97
HLA-C-204ENST00000415537 PIK3R5Q8WYR1 880 aa27.35■■□□□ 1.97
HLA-C-204ENST00000415537 ZBTB45Q96K62 511 aaPredicted RBP27.35■■□□□ 1.97
HLA-C-204ENST00000415537 PIDD1Q9HB75 910 aa27.35■■□□□ 1.97
HLA-C-204ENST00000415537 VWA8A3KMH1 1905 aa27.34■■□□□ 1.97
HLA-C-204ENST00000415537 TRAPPC3O43617 180 aa27.34■■□□□ 1.97
HLA-C-204ENST00000415537 RFPL2O75678 378 aa27.34■■□□□ 1.97
HLA-C-204ENST00000415537 BRD1O95696 1058 aa27.34■■□□□ 1.97
HLA-C-204ENST00000415537 KRT18P05783 430 aaKnown RBP27.34■■□□□ 1.97
HLA-C-204ENST00000415537 PLCG1P19174 1290 aa27.34■■□□□ 1.97
HLA-C-204ENST00000415537 GRIN1Q05586 938 aa27.34■■□□□ 1.97
HLA-C-204ENST00000415537 NOLC1Q14978 699 aaKnown RBP eCLIP27.34■■□□□ 1.971e-8■□□□□ 9.6
HLA-C-204ENST00000415537 UPP1Q16831 310 aa27.34■■□□□ 1.97
HLA-C-204ENST00000415537 LILRA6Q6PI73 481 aa27.34■■□□□ 1.97
HLA-C-204ENST00000415537 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.34■■□□□ 1.97
HLA-C-204ENST00000415537 SUGP1Q8IWZ8 645 aaKnown RBP27.34■■□□□ 1.97
HLA-C-204ENST00000415537 UBALD2Q8IYN6 164 aa27.34■■□□□ 1.97
HLA-C-204ENST00000415537 LNX1Q8TBB1 728 aaPredicted RBP27.34■■□□□ 1.97
HLA-C-204ENST00000415537 SMG7Q92540 1137 aaKnown RBP27.34■■□□□ 1.97
HLA-C-204ENST00000415537 STAMQ92783 540 aa27.34■■□□□ 1.97
HLA-C-204ENST00000415537 BICD1Q96G01 975 aa27.34■■□□□ 1.97
HLA-C-204ENST00000415537 INTS4Q96HW7 963 aaKnown RBP27.34■■□□□ 1.97
HLA-C-204ENST00000415537 REEP2Q9BRK0 252 aa27.34■■□□□ 1.97
HLA-C-204ENST00000415537 RHOBTB2Q9BYZ6 727 aa27.34■■□□□ 1.97
HLA-C-204ENST00000415537 GOLGA2P5Q9HBQ8 144 aa27.34■■□□□ 1.97
HLA-C-204ENST00000415537 CLDN3O15551 220 aa27.33■■□□□ 1.97
HLA-C-204ENST00000415537 FAM13AO94988 1023 aa27.33■■□□□ 1.97
HLA-C-204ENST00000415537 SYT1P21579 422 aa27.33■■□□□ 1.97
HLA-C-204ENST00000415537 XKR4Q5GH76 650 aa27.33■■□□□ 1.97
HLA-C-204ENST00000415537 ZPBP2Q6X784 338 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms