RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 SAMSN1Q9NSI8 373 aaKnown RBP21.75■■□□□ 1.07
AP1S3-205ENST00000415298 EPN1Q9Y6I3 576 aaPredicted RBP21.75■■□□□ 1.07
AP1S3-205ENST00000415298 MAGEB3O15480 346 aa21.74■■□□□ 1.07
AP1S3-205ENST00000415298 YEATS4O95619 227 aa21.74■■□□□ 1.07
AP1S3-205ENST00000415298 CARSP49589 748 aaKnown RBP21.74■■□□□ 1.07
AP1S3-205ENST00000415298 FXR1P51114 621 aaKnown RBP eCLIP21.74■■□□□ 1.07
AP1S3-205ENST00000415298 LRP8Q14114 963 aa21.74■■□□□ 1.07
AP1S3-205ENST00000415298 KIF22Q14807 665 aa21.74■■□□□ 1.07
AP1S3-205ENST00000415298 CCSAPQ6IQ19 270 aaPredicted RBP21.74■■□□□ 1.07
AP1S3-205ENST00000415298 SLC17A8Q8NDX2 589 aa21.74■■□□□ 1.07
AP1S3-205ENST00000415298 MTMR8Q96EF0 704 aa21.74■■□□□ 1.07
AP1S3-205ENST00000415298 MPP4Q96JB8 637 aa21.74■■□□□ 1.07
AP1S3-205ENST00000415298 NUDCD1Q96RS6 583 aa21.74■■□□□ 1.07
AP1S3-205ENST00000415298 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.74■■□□□ 1.07
AP1S3-205ENST00000415298 GYPCP04921 128 aa21.74■■□□□ 1.07
AP1S3-205ENST00000415298 IDEP14735 1019 aa21.74■■□□□ 1.07
AP1S3-205ENST00000415298 PPIL2Q13356 520 aa21.74■■□□□ 1.07
AP1S3-205ENST00000415298 GADL1Q6ZQY3 521 aa21.74■■□□□ 1.07
AP1S3-205ENST00000415298 ZNF662Q6ZS27 426 aa21.74■■□□□ 1.07
AP1S3-205ENST00000415298 SH3TC2Q8TF17 1288 aa21.74■■□□□ 1.07
AP1S3-205ENST00000415298 WASF1Q92558 559 aa21.74■■□□□ 1.07
AP1S3-205ENST00000415298 C12orf42Q96LP6 360 aa21.74■■□□□ 1.07
AP1S3-205ENST00000415298 SEC63Q9UGP8 760 aaKnown RBP21.74■■□□□ 1.07
AP1S3-205ENST00000415298 KIF28PB7ZC32 967 aa21.73■■□□□ 1.07
AP1S3-205ENST00000415298 WNT7AO00755 349 aa21.73■■□□□ 1.07
AP1S3-205ENST00000415298 ZBTB5O15062 677 aa21.73■■□□□ 1.07
AP1S3-205ENST00000415298 SPTLC2O15270 562 aa21.73■■□□□ 1.07
AP1S3-205ENST00000415298 NDUFA10O95299 355 aa21.73■■□□□ 1.07
AP1S3-205ENST00000415298 VHLP40337 213 aa21.73■■□□□ 1.07
AP1S3-205ENST00000415298 GALK1P51570 392 aa21.73■■□□□ 1.07
AP1S3-205ENST00000415298 TBL3Q12788 808 aaKnown RBP21.73■■□□□ 1.07
AP1S3-205ENST00000415298 MSLNQ13421 630 aaPredicted RBP21.73■■□□□ 1.07
AP1S3-205ENST00000415298 PNOCQ13519 176 aa21.73■■□□□ 1.07
AP1S3-205ENST00000415298 SEPT7Q16181 437 aaKnown RBP21.73■■□□□ 1.07
AP1S3-205ENST00000415298 ZC2HC1CQ53FD0 456 aaPredicted RBP21.73■■□□□ 1.07
AP1S3-205ENST00000415298 OXER1Q8TDS5 423 aa21.73■■□□□ 1.07
AP1S3-205ENST00000415298 CEP295NLQ96MC4 621 aa21.73■■□□□ 1.07
AP1S3-205ENST00000415298 ELAC2Q9BQ52 826 aaKnown RBP21.73■■□□□ 1.07
AP1S3-205ENST00000415298 ABHD10Q9NUJ1 306 aa21.73■■□□□ 1.07
AP1S3-205ENST00000415298 A0A0G2JLL6 359 aaPredicted RBP21.73■■□□□ 1.07
AP1S3-205ENST00000415298 PNMA6FA0A0J9YX94 578 aa21.73■■□□□ 1.07
AP1S3-205ENST00000415298 OCRLQ01968 901 aa21.73■■□□□ 1.07
AP1S3-205ENST00000415298 PRRT2Q7Z6L0 340 aaPredicted RBP21.73■■□□□ 1.07
AP1S3-205ENST00000415298 DDX23Q9BUQ8 820 aaKnown RBP21.73■■□□□ 1.07
AP1S3-205ENST00000415298 IL1RAPL1Q9NZN1 696 aa21.73■■□□□ 1.07
AP1S3-205ENST00000415298 FEM1BQ9UK73 627 aa21.73■■□□□ 1.07
AP1S3-205ENST00000415298 KCNH4Q9UQ05 1017 aa21.73■■□□□ 1.07
AP1S3-205ENST00000415298 TBC1D30Q9Y2I9 924 aa21.73■■□□□ 1.07
AP1S3-205ENST00000415298 OXSR1O95747 527 aaPredicted RBP21.72■■□□□ 1.07
AP1S3-205ENST00000415298 EIF2B5Q13144 721 aaKnown RBP21.72■■□□□ 1.07
AP1S3-205ENST00000415298 MOGSQ13724 837 aa21.72■■□□□ 1.07
AP1S3-205ENST00000415298 CCDC174Q6PII3 467 aa21.72■■□□□ 1.07
AP1S3-205ENST00000415298 CABP7Q86V35 215 aa21.72■■□□□ 1.07
AP1S3-205ENST00000415298 CHURC1Q8WUH1 139 aa21.72■■□□□ 1.07
AP1S3-205ENST00000415298 GFM2Q969S9 779 aaKnown RBP21.72■■□□□ 1.07
AP1S3-205ENST00000415298 GBA3Q9H227 469 aa21.72■■□□□ 1.07
AP1S3-205ENST00000415298 TBKBP1A7MCY6 615 aa21.72■■□□□ 1.07
AP1S3-205ENST00000415298 BTBD18B2RXH4 712 aa21.72■■□□□ 1.07
AP1S3-205ENST00000415298 CXCL11O14625 94 aa21.72■■□□□ 1.07
AP1S3-205ENST00000415298 PEX10O60683 326 aa21.72■■□□□ 1.07
AP1S3-205ENST00000415298 STK10O94804 968 aaKnown RBP21.72■■□□□ 1.07
AP1S3-205ENST00000415298 SKIV2L2P42285 1042 aaKnown RBP21.72■■□□□ 1.07
AP1S3-205ENST00000415298 SYKP43405 635 aa21.72■■□□□ 1.07
AP1S3-205ENST00000415298 RTP1P59025 263 aa21.72■■□□□ 1.07
AP1S3-205ENST00000415298 NPY5RQ15761 445 aa21.72■■□□□ 1.07
AP1S3-205ENST00000415298 ZC3H18Q86VM9 953 aaKnown RBP21.72■■□□□ 1.07
AP1S3-205ENST00000415298 TREML1Q86YW5 311 aa21.72■■□□□ 1.07
AP1S3-205ENST00000415298 NSRP1Q9H0G5 558 aaKnown RBP21.72■■□□□ 1.07
AP1S3-205ENST00000415298 FAM114A2Q9NRY5 505 aa21.72■■□□□ 1.07
AP1S3-205ENST00000415298 BARHL2Q9NY43 387 aa21.72■■□□□ 1.07
AP1S3-205ENST00000415298 NR5A1Q13285 461 aa21.71■■□□□ 1.07
AP1S3-205ENST00000415298 TRIM29Q14134 588 aa21.71■■□□□ 1.07
AP1S3-205ENST00000415298 PARP6Q2NL67 630 aa21.71■■□□□ 1.07
AP1S3-205ENST00000415298 TRPC4APQ8TEL6 797 aa21.71■■□□□ 1.07
AP1S3-205ENST00000415298 UIMC1Q96RL1 719 aa21.71■■□□□ 1.07
AP1S3-205ENST00000415298 PHF20Q9BVI0 1012 aa21.71■■□□□ 1.07
AP1S3-205ENST00000415298 NDEL1Q9GZM8 345 aa21.71■■□□□ 1.07
AP1S3-205ENST00000415298 STOML1Q9UBI4 398 aa21.71■■□□□ 1.07
AP1S3-205ENST00000415298 DACH1Q9UI36 760 aa21.71■■□□□ 1.07
AP1S3-205ENST00000415298 CCPG1Q9ULG6 757 aa21.71■■□□□ 1.07
AP1S3-205ENST00000415298 SNX12Q9UMY4 172 aa21.71■■□□□ 1.07
AP1S3-205ENST00000415298 H0YGN5 161 aa21.71■■□□□ 1.07
AP1S3-205ENST00000415298 MMP1P03956 469 aa21.71■■□□□ 1.07
AP1S3-205ENST00000415298 PABPC4LP0CB38 370 aaKnown RBP21.71■■□□□ 1.07
AP1S3-205ENST00000415298 ADRM1Q16186 407 aa21.71■■□□□ 1.07
AP1S3-205ENST00000415298 DEPDC1Q5TB30 811 aa21.71■■□□□ 1.07
AP1S3-205ENST00000415298 CATSPERGQ6ZRH7 1159 aa21.71■■□□□ 1.07
AP1S3-205ENST00000415298 NEK10Q6ZWH5 1172 aa21.71■■□□□ 1.07
AP1S3-205ENST00000415298 NELFBQ8WX92 580 aa21.71■■□□□ 1.07
AP1S3-205ENST00000415298 NOVA2Q9UNW9 492 aaKnown RBP21.71■■□□□ 1.07
AP1S3-205ENST00000415298 NFS1Q9Y697 457 aa21.71■■□□□ 1.07
AP1S3-205ENST00000415298 KRT86O43790 486 aa21.7■■□□□ 1.06
AP1S3-205ENST00000415298 ENPP1P22413 925 aa21.7■■□□□ 1.06
AP1S3-205ENST00000415298 CDK7P50613 346 aa21.7■■□□□ 1.06
AP1S3-205ENST00000415298 UBE2Q1Q7Z7E8 422 aa21.7■■□□□ 1.06
AP1S3-205ENST00000415298 FAM133AQ8N9E0 248 aa21.7■■□□□ 1.06
AP1S3-205ENST00000415298 FNDC8Q8TC99 324 aa21.7■■□□□ 1.06
AP1S3-205ENST00000415298 ATG4CQ96DT6 458 aa21.7■■□□□ 1.06
AP1S3-205ENST00000415298 CLK4Q9HAZ1 481 aaKnown RBP21.7■■□□□ 1.06
AP1S3-205ENST00000415298 POLR3EQ9NVU0 708 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms