RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 PPP1R3GB7ZBB8 358 aa12.97□□□□□ -0.33
ATG4B-207ENST00000415107 SOX1O00570 391 aaPredicted RBP12.97□□□□□ -0.33
ATG4B-207ENST00000415107 PSMA7O14818 248 aa12.97□□□□□ -0.33
ATG4B-207ENST00000415107 IL18RAPO95256 599 aa12.97□□□□□ -0.33
ATG4B-207ENST00000415107 THP07101 528 aa12.97□□□□□ -0.33
ATG4B-207ENST00000415107 CYP3A5P20815 502 aa12.97□□□□□ -0.33
ATG4B-207ENST00000415107 CCNE1P24864 410 aa12.97□□□□□ -0.33
ATG4B-207ENST00000415107 PPM1AP35813 382 aa12.97□□□□□ -0.33
ATG4B-207ENST00000415107 MATR3P43243 847 aaKnown RBP eCLIP12.97□□□□□ -0.33
ATG4B-207ENST00000415107 GATMP50440 423 aa12.97□□□□□ -0.33
ATG4B-207ENST00000415107 SCNN1GP51170 649 aa12.97□□□□□ -0.33
ATG4B-207ENST00000415107 PPP2R3AQ06190 1150 aa12.97□□□□□ -0.33
ATG4B-207ENST00000415107 SURF1Q15526 300 aa12.97□□□□□ -0.33
ATG4B-207ENST00000415107 ZBTB6Q15916 424 aa12.97□□□□□ -0.33
ATG4B-207ENST00000415107 PPP2R2DQ66LE6 453 aa12.97□□□□□ -0.33
ATG4B-207ENST00000415107 FAM117BQ6P1L5 589 aa12.97□□□□□ -0.33
ATG4B-207ENST00000415107 TMEM192Q8IY95 271 aa12.97□□□□□ -0.33
ATG4B-207ENST00000415107 COLGALT2Q8IYK4 626 aa12.97□□□□□ -0.33
ATG4B-207ENST00000415107 ZFP42Q96MM3 310 aa12.97□□□□□ -0.33
ATG4B-207ENST00000415107 TGS1Q96RS0 853 aaKnown RBP12.97□□□□□ -0.33
ATG4B-207ENST00000415107 MKNK1Q9BUB5 465 aa12.97□□□□□ -0.33
ATG4B-207ENST00000415107 SEMA6BQ9H3T3 888 aa12.97□□□□□ -0.33
ATG4B-207ENST00000415107 RPF1Q9H9Y2 349 aaKnown RBP12.97□□□□□ -0.33
ATG4B-207ENST00000415107 SLC28A3Q9HAS3 691 aa12.97□□□□□ -0.33
ATG4B-207ENST00000415107 AAASQ9NRG9 546 aa12.97□□□□□ -0.33
ATG4B-207ENST00000415107 SLC38A7Q9NVC3 462 aa12.97□□□□□ -0.33
ATG4B-207ENST00000415107 STK39Q9UEW8 545 aa12.97□□□□□ -0.33
ATG4B-207ENST00000415107 PARP2Q9UGN5 583 aa12.97□□□□□ -0.33
ATG4B-207ENST00000415107 SMIM28A0A1B0GU29 152 aa12.96□□□□□ -0.33
ATG4B-207ENST00000415107 TMEM189-UBE2V1I3L0A0 370 aa12.96□□□□□ -0.33
ATG4B-207ENST00000415107 ARHGEF15O94989 841 aa12.96□□□□□ -0.33
ATG4B-207ENST00000415107 NR3C1P04150 777 aa12.96□□□□□ -0.33
ATG4B-207ENST00000415107 CXCL8P10145 99 aa12.96□□□□□ -0.33
ATG4B-207ENST00000415107 HARSP12081 509 aaKnown RBP12.96□□□□□ -0.33
ATG4B-207ENST00000415107 MYOGP15173 224 aa12.96□□□□□ -0.33
ATG4B-207ENST00000415107 RPL13P26373 211 aaKnown RBP12.96□□□□□ -0.33
ATG4B-207ENST00000415107 BMPR1AP36894 532 aa12.96□□□□□ -0.33
ATG4B-207ENST00000415107 TNFSF9P41273 254 aa12.96□□□□□ -0.33
ATG4B-207ENST00000415107 FXR1P51114 621 aaKnown RBP eCLIP12.96□□□□□ -0.33
ATG4B-207ENST00000415107 AFF1P51825 1210 aaKnown RBP12.96□□□□□ -0.33
ATG4B-207ENST00000415107 PLCB3Q01970 1234 aa12.96□□□□□ -0.33
ATG4B-207ENST00000415107 TUSC3Q13454 348 aa12.96□□□□□ -0.33
ATG4B-207ENST00000415107 ZBTB41Q5SVQ8 909 aa12.96□□□□□ -0.33
ATG4B-207ENST00000415107 SMYD4Q8IYR2 804 aaPredicted RBP12.96□□□□□ -0.33
ATG4B-207ENST00000415107 UROC1Q96N76 676 aa12.96□□□□□ -0.33
ATG4B-207ENST00000415107 APOL6Q9BWW8 343 aa12.96□□□□□ -0.33
ATG4B-207ENST00000415107 NKX2-4Q9H2Z4 354 aa12.96□□□□□ -0.33
ATG4B-207ENST00000415107 NRDE2Q9H7Z3 1164 aa12.96□□□□□ -0.33
ATG4B-207ENST00000415107 MIOSQ9NXC5 875 aa12.96□□□□□ -0.33
ATG4B-207ENST00000415107 TMEM63CQ9P1W3 806 aa12.96□□□□□ -0.33
ATG4B-207ENST00000415107 PLAGL2Q9UPG8 496 aa12.96□□□□□ -0.33
ATG4B-207ENST00000415107 BICDL2A1A5D9 508 aa12.95□□□□□ -0.34
ATG4B-207ENST00000415107 ZNF233A6NK53 670 aa12.95□□□□□ -0.34
ATG4B-207ENST00000415107 XPOTO43592 962 aaKnown RBP12.95□□□□□ -0.34
ATG4B-207ENST00000415107 DDHD2O94830 711 aa12.95□□□□□ -0.34
ATG4B-207ENST00000415107 EFEMP2O95967 443 aa12.95□□□□□ -0.34
ATG4B-207ENST00000415107 CD44P16070 742 aaKnown RBP12.95□□□□□ -0.34
ATG4B-207ENST00000415107 NR2F2P24468 414 aa12.95□□□□□ -0.34
ATG4B-207ENST00000415107 LRPAP1P30533 357 aa12.95□□□□□ -0.34
ATG4B-207ENST00000415107 ACOT2P49753 483 aa12.95□□□□□ -0.34
ATG4B-207ENST00000415107 NLRP12P59046 1061 aa12.95□□□□□ -0.34
ATG4B-207ENST00000415107 CLDN10P78369 228 aa12.95□□□□□ -0.34
ATG4B-207ENST00000415107 FKBP3Q00688 224 aaKnown RBP12.95□□□□□ -0.34
ATG4B-207ENST00000415107 UBE3AQ05086 875 aa12.95□□□□□ -0.34
ATG4B-207ENST00000415107 SNRNP35Q16560 246 aaKnown RBP12.95□□□□□ -0.34
ATG4B-207ENST00000415107 PAN2Q504Q3 1202 aaKnown RBP12.95□□□□□ -0.34
ATG4B-207ENST00000415107 EPC2Q52LR7 807 aa12.95□□□□□ -0.34
ATG4B-207ENST00000415107 TTI2Q6NXR4 508 aa12.95□□□□□ -0.34
ATG4B-207ENST00000415107 MFSD14AQ96MC6 490 aa12.95□□□□□ -0.34
ATG4B-207ENST00000415107 ZMAT2Q96NC0 199 aaKnown RBP12.95□□□□□ -0.34
ATG4B-207ENST00000415107 ZNF558Q96NG5 402 aa12.95□□□□□ -0.34
ATG4B-207ENST00000415107 TSG101Q99816 390 aa12.95□□□□□ -0.34
ATG4B-207ENST00000415107 C11orf84Q9BUA3 381 aaPredicted RBP12.95□□□□□ -0.34
ATG4B-207ENST00000415107 ZNF576Q9H609 170 aa12.95□□□□□ -0.34
ATG4B-207ENST00000415107 RBAKQ9NYW8 714 aaPredicted RBP12.95□□□□□ -0.34
ATG4B-207ENST00000415107 DACH1Q9UI36 760 aa12.95□□□□□ -0.34
ATG4B-207ENST00000415107 UBQLN1Q9UMX0 589 aaKnown RBP12.95□□□□□ -0.34
ATG4B-207ENST00000415107 LZTS1Q9Y250 596 aa12.95□□□□□ -0.34
ATG4B-207ENST00000415107 CHD7Q9P2D1 2997 aa12.95□□□□□ -0.34
ATG4B-207ENST00000415107 TRIP11Q15643 1979 aa12.94□□□□□ -0.34
ATG4B-207ENST00000415107 LACTBL1A8MY62 500 aa12.94□□□□□ -0.34
ATG4B-207ENST00000415107 H3BNC9 293 aa12.94□□□□□ -0.34
ATG4B-207ENST00000415107 CLIC2O15247 247 aa12.94□□□□□ -0.34
ATG4B-207ENST00000415107 SLC16A3O15427 465 aaKnown RBP12.94□□□□□ -0.34
ATG4B-207ENST00000415107 B4GALT3O60512 393 aa12.94□□□□□ -0.34
ATG4B-207ENST00000415107 EXOC3O60645 756 aa12.94□□□□□ -0.34
ATG4B-207ENST00000415107 LETM1O95202 739 aaPredicted RBP12.94□□□□□ -0.34
ATG4B-207ENST00000415107 POMCP01189 267 aa12.94□□□□□ -0.34
ATG4B-207ENST00000415107 GALTP07902 379 aa12.94□□□□□ -0.34
ATG4B-207ENST00000415107 POU3F3P20264 500 aaPredicted RBP12.94□□□□□ -0.34
ATG4B-207ENST00000415107 PAX3P23760 479 aa12.94□□□□□ -0.34
ATG4B-207ENST00000415107 ERCC5P28715 1186 aaPredicted RBP12.94□□□□□ -0.34
ATG4B-207ENST00000415107 RPL9P32969 192 aaKnown RBP12.94□□□□□ -0.34
ATG4B-207ENST00000415107 OSTNP61366 133 aa12.94□□□□□ -0.34
ATG4B-207ENST00000415107 RNASELQ05823 741 aaKnown RBP12.94□□□□□ -0.34
ATG4B-207ENST00000415107 CYP24A1Q07973 514 aa12.94□□□□□ -0.34
ATG4B-207ENST00000415107 PAK1Q13153 545 aa12.94□□□□□ -0.34
ATG4B-207ENST00000415107 PSMD6Q15008 389 aa12.94□□□□□ -0.34
ATG4B-207ENST00000415107 SEZ6Q53EL9 994 aa12.94□□□□□ -0.34
ATG4B-207ENST00000415107 ZNF697Q5TEC3 545 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 221.1 ms