RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 KMT5AQ9NQR1 393 aa17.09■□□□□ 0.33
ACTB-202ENST00000414620 MYH15Q9Y2K3 1946 aa17.09■□□□□ 0.33
ACTB-202ENST00000414620 CLUHO75153 1309 aa17.08■□□□□ 0.32
ACTB-202ENST00000414620 SFI1A8K8P3 1242 aa17.08■□□□□ 0.32
ACTB-202ENST00000414620 SLC16A4O15374 487 aa17.08■□□□□ 0.32
ACTB-202ENST00000414620 HARSP12081 509 aaKnown RBP17.08■□□□□ 0.32
ACTB-202ENST00000414620 GBP2P32456 591 aaPredicted RBP17.08■□□□□ 0.32
ACTB-202ENST00000414620 PSMD5Q16401 504 aa17.08■□□□□ 0.32
ACTB-202ENST00000414620 C1orf186Q6ZWK4 172 aa17.08■□□□□ 0.32
ACTB-202ENST00000414620 TAS1R3Q7RTX0 852 aa17.08■□□□□ 0.32
ACTB-202ENST00000414620 ZNF707Q96C28 371 aaPredicted RBP17.08■□□□□ 0.32
ACTB-202ENST00000414620 DRC1Q96MC2 740 aa17.08■□□□□ 0.32
ACTB-202ENST00000414620 TTPALQ9BTX7 342 aa17.08■□□□□ 0.32
ACTB-202ENST00000414620 TARS2Q9BW92 718 aaKnown RBP17.08■□□□□ 0.32
ACTB-202ENST00000414620 FNIP2Q9P278 1114 aa17.08■□□□□ 0.32
ACTB-202ENST00000414620 DPP7Q9UHL4 492 aa17.08■□□□□ 0.32
ACTB-202ENST00000414620 SMC3Q9UQE7 1217 aa17.08■□□□□ 0.32
ACTB-202ENST00000414620 TNFSF13BQ9Y275 285 aa17.08■□□□□ 0.32
ACTB-202ENST00000414620 N4BP1O75113 896 aaKnown RBP17.07■□□□□ 0.32
ACTB-202ENST00000414620 AVPR2P30518 371 aa17.07■□□□□ 0.32
ACTB-202ENST00000414620 CLCNKBP51801 687 aa17.07■□□□□ 0.32
ACTB-202ENST00000414620 CACNB1Q02641 598 aaPredicted RBP17.07■□□□□ 0.32
ACTB-202ENST00000414620 CREMQ03060 361 aa17.07■□□□□ 0.32
ACTB-202ENST00000414620 GET4Q7L5D6 327 aaPredicted RBP17.07■□□□□ 0.32
ACTB-202ENST00000414620 PHOX2BQ99453 314 aa17.07■□□□□ 0.32
ACTB-202ENST00000414620 ACO2Q99798 780 aaKnown RBP17.07■□□□□ 0.32
ACTB-202ENST00000414620 MRPL4Q9BYD3 311 aaKnown RBP17.07■□□□□ 0.32
ACTB-202ENST00000414620 WDR6Q9NNW5 1121 aaKnown RBP17.07■□□□□ 0.32
ACTB-202ENST00000414620 ARHGAP28Q9P2N2 729 aa17.07■□□□□ 0.32
ACTB-202ENST00000414620 ANK1P16157 1881 aa17.06■□□□□ 0.32
ACTB-202ENST00000414620 ZDBF2Q9HCK1 2354 aa17.06■□□□□ 0.32
ACTB-202ENST00000414620 I3L4J1 428 aa17.06■□□□□ 0.32
ACTB-202ENST00000414620 ADAM12O43184 909 aa17.06■□□□□ 0.32
ACTB-202ENST00000414620 GRM5P41594 1212 aa17.06■□□□□ 0.32
ACTB-202ENST00000414620 MRE11P49959 708 aa17.06■□□□□ 0.32
ACTB-202ENST00000414620 TCF15Q12870 199 aa17.06■□□□□ 0.32
ACTB-202ENST00000414620 LILRA6Q6PI73 481 aa17.06■□□□□ 0.32
ACTB-202ENST00000414620 APBB1IPQ7Z5R6 666 aaPredicted RBP17.06■□□□□ 0.32
ACTB-202ENST00000414620 LNX1Q8TBB1 728 aaPredicted RBP17.06■□□□□ 0.32
ACTB-202ENST00000414620 PIK3R5Q8WYR1 880 aa17.06■□□□□ 0.32
ACTB-202ENST00000414620 CDK5RAP3Q96JB5 506 aa17.06■□□□□ 0.32
ACTB-202ENST00000414620 PPP1R10Q96QC0 940 aaKnown RBP17.06■□□□□ 0.32
ACTB-202ENST00000414620 MYADMQ96S97 322 aa17.06■□□□□ 0.32
ACTB-202ENST00000414620 CLSTN3Q9BQT9 956 aa17.06■□□□□ 0.32
ACTB-202ENST00000414620 CCDC94Q9BW85 323 aaPredicted RBP17.06■□□□□ 0.32
ACTB-202ENST00000414620 NT5C3AQ9H0P0 336 aa17.06■□□□□ 0.32
ACTB-202ENST00000414620 PLEKHA4Q9H4M7 779 aa17.06■□□□□ 0.32
ACTB-202ENST00000414620 TMEM134Q9H6X4 195 aa17.06■□□□□ 0.32
ACTB-202ENST00000414620 NOTCH4Q99466 2003 aa17.05■□□□□ 0.32
ACTB-202ENST00000414620 NPHP3-ACAD11A0A0J9YXS1 232 aa17.05■□□□□ 0.32
ACTB-202ENST00000414620 B3GAT3O94766 335 aa17.05■□□□□ 0.32
ACTB-202ENST00000414620 BRCC3P46736 316 aa17.05■□□□□ 0.32
ACTB-202ENST00000414620 YARSP54577 528 aaKnown RBP17.05■□□□□ 0.32
ACTB-202ENST00000414620 PTPN5P54829 565 aa17.05■□□□□ 0.32
ACTB-202ENST00000414620 SOX4Q06945 474 aaPredicted RBP17.05■□□□□ 0.32
ACTB-202ENST00000414620 ELAVL2Q12926 359 aaKnown RBP17.05■□□□□ 0.32
ACTB-202ENST00000414620 HYIQ5T013 277 aa17.05■□□□□ 0.32
ACTB-202ENST00000414620 GPR65Q8IYL9 337 aa17.05■□□□□ 0.32
ACTB-202ENST00000414620 C3orf58Q8NDZ4 430 aa17.05■□□□□ 0.32
ACTB-202ENST00000414620 ST13P5Q8NFI4 369 aaPredicted RBP17.05■□□□□ 0.32
ACTB-202ENST00000414620 HDAC7Q8WUI4 952 aa17.05■□□□□ 0.32
ACTB-202ENST00000414620 RSAD2Q8WXG1 361 aa17.05■□□□□ 0.32
ACTB-202ENST00000414620 STAMQ92783 540 aa17.05■□□□□ 0.32
ACTB-202ENST00000414620 ZBTB45Q96K62 511 aaPredicted RBP17.05■□□□□ 0.32
ACTB-202ENST00000414620 TBC1D32Q96NH3 1257 aa17.05■□□□□ 0.32
ACTB-202ENST00000414620 TCHPQ9BT92 498 aa17.05■□□□□ 0.32
ACTB-202ENST00000414620 MFSD1Q9H3U5 465 aa17.05■□□□□ 0.32
ACTB-202ENST00000414620 KCNK12Q9HB15 430 aa17.05■□□□□ 0.32
ACTB-202ENST00000414620 PTPRHQ9HD43 1115 aa17.05■□□□□ 0.32
ACTB-202ENST00000414620 FAM86C1Q9NVL1 165 aa17.05■□□□□ 0.32
ACTB-202ENST00000414620 ZDHHC7Q9NXF8 308 aa17.05■□□□□ 0.32
ACTB-202ENST00000414620 ANKFY1Q9P2R3 1169 aa17.05■□□□□ 0.32
ACTB-202ENST00000414620 FBXW11Q9UKB1 542 aa17.05■□□□□ 0.32
ACTB-202ENST00000414620 SMIM28A0A1B0GU29 152 aa17.04■□□□□ 0.32
ACTB-202ENST00000414620 NARSO43776 548 aaKnown RBP17.04■□□□□ 0.32
ACTB-202ENST00000414620 ZMYND10O75800 440 aa17.04■□□□□ 0.32
ACTB-202ENST00000414620 PLA2G4BP0C869 781 aa17.04■□□□□ 0.32
ACTB-202ENST00000414620 GUCY2CP25092 1073 aa17.04■□□□□ 0.32
ACTB-202ENST00000414620 TKTP29401 623 aaKnown RBP17.04■□□□□ 0.32
ACTB-202ENST00000414620 MCM2P49736 904 aa17.04■□□□□ 0.32
ACTB-202ENST00000414620 SLC12A3P55017 1021 aa17.04■□□□□ 0.32
ACTB-202ENST00000414620 TDGQ13569 410 aa17.04■□□□□ 0.32
ACTB-202ENST00000414620 TMEM119Q4V9L6 283 aa17.04■□□□□ 0.32
ACTB-202ENST00000414620 SEZ6Q53EL9 994 aa17.04■□□□□ 0.32
ACTB-202ENST00000414620 LIN9Q5TKA1 542 aa17.04■□□□□ 0.32
ACTB-202ENST00000414620 LARP1BQ659C4 914 aaKnown RBP17.04■□□□□ 0.32
ACTB-202ENST00000414620 MPZL3Q6UWV2 235 aa17.04■□□□□ 0.32
ACTB-202ENST00000414620 CD300LGQ6UXG3 332 aa17.04■□□□□ 0.32
ACTB-202ENST00000414620 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.04■□□□□ 0.32
ACTB-202ENST00000414620 TMEM105Q8N8V8 129 aa17.04■□□□□ 0.32
ACTB-202ENST00000414620 SYT2Q8N9I0 419 aaPredicted RBP17.04■□□□□ 0.32
ACTB-202ENST00000414620 PRKD2Q9BZL6 878 aa17.04■□□□□ 0.32
ACTB-202ENST00000414620 TOPORSQ9NS56 1045 aaPredicted RBP17.04■□□□□ 0.32
ACTB-202ENST00000414620 DUSP12Q9UNI6 340 aa17.04■□□□□ 0.32
ACTB-202ENST00000414620 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.04■□□□□ 0.32
ACTB-202ENST00000414620 WDFY4Q6ZS81 3184 aa17.03■□□□□ 0.32
ACTB-202ENST00000414620 TMEM189-UBE2V1I3L0A0 370 aa17.03■□□□□ 0.32
ACTB-202ENST00000414620 ABLIM1O14639 778 aa17.03■□□□□ 0.32
ACTB-202ENST00000414620 CCL16O15467 120 aa17.03■□□□□ 0.32
ACTB-202ENST00000414620 C8AP07357 584 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms