RNA–Protein interactions for RNA: ENST00000413951.5

SF1-207, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 623 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-207ENST00000413951 GFRA3O60609 400 aa18.38■□□□□ 0.53
SF1-207ENST00000413951 MED24O75448 989 aa18.38■□□□□ 0.53
SF1-207ENST00000413951 CEBPZQ03701 1054 aaKnown RBP18.38■□□□□ 0.53
SF1-207ENST00000413951 DCAF4L1Q3SXM0 396 aa18.38■□□□□ 0.53
SF1-207ENST00000413951 PALB2Q86YC2 1186 aa18.38■□□□□ 0.53
SF1-207ENST00000413951 KIFAP3Q92845 792 aa18.38■□□□□ 0.53
SF1-207ENST00000413951 AK8Q96MA6 479 aa18.38■□□□□ 0.53
SF1-207ENST00000413951 TTPALQ9BTX7 342 aa18.38■□□□□ 0.53
SF1-207ENST00000413951 GPR62Q9BZJ7 368 aa18.38■□□□□ 0.53
SF1-207ENST00000413951 PRKD2Q9BZL6 878 aa18.38■□□□□ 0.53
SF1-207ENST00000413951 NT5C3AQ9H0P0 336 aa18.38■□□□□ 0.53
SF1-207ENST00000413951 GPRC5CQ9NQ84 441 aa18.38■□□□□ 0.53
SF1-207ENST00000413951 CHMP5Q9NZZ3 219 aa18.38■□□□□ 0.53
SF1-207ENST00000413951 KLK14Q9P0G3 267 aa18.38■□□□□ 0.53
SF1-207ENST00000413951 TFIP11Q9UBB9 837 aaKnown RBP18.38■□□□□ 0.53
SF1-207ENST00000413951 WNT16Q9UBV4 365 aa18.38■□□□□ 0.53
SF1-207ENST00000413951 LRWD1Q9UFC0 647 aa18.38■□□□□ 0.53
SF1-207ENST00000413951 CFAP45Q9UL16 551 aa18.38■□□□□ 0.53
SF1-207ENST00000413951 SRPRBQ9Y5M8 271 aaKnown RBP18.38■□□□□ 0.53
SF1-207ENST00000413951 VWA3AA6NCI4 1184 aa18.37■□□□□ 0.53
SF1-207ENST00000413951 PROB1E7EW31 1015 aa18.37■□□□□ 0.53
SF1-207ENST00000413951 H0Y858 1186 aa18.37■□□□□ 0.53
SF1-207ENST00000413951 TGM5O43548 720 aa18.37■□□□□ 0.53
SF1-207ENST00000413951 PPP6R2O75170 966 aa18.37■□□□□ 0.53
SF1-207ENST00000413951 PRKCBP05771 671 aa18.37■□□□□ 0.53
SF1-207ENST00000413951 RFX1P22670 979 aa18.37■□□□□ 0.53
SF1-207ENST00000413951 LONP1P36776 959 aaKnown RBP18.37■□□□□ 0.53
SF1-207ENST00000413951 GRIN1Q05586 938 aa18.37■□□□□ 0.53
SF1-207ENST00000413951 LIN9Q5TKA1 542 aa18.37■□□□□ 0.53
SF1-207ENST00000413951 CDR2LQ86X02 465 aaPredicted RBP18.37■□□□□ 0.53
SF1-207ENST00000413951 TMEM105Q8N8V8 129 aa18.37■□□□□ 0.53
SF1-207ENST00000413951 FLCNQ8NFG4 579 aa18.37■□□□□ 0.53
SF1-207ENST00000413951 PHOX2BQ99453 314 aa18.37■□□□□ 0.53
SF1-207ENST00000413951 RCOR1Q9UKL0 485 aa18.37■□□□□ 0.53
SF1-207ENST00000413951 TCHHQ07283 1943 aa18.37■□□□□ 0.53
SF1-207ENST00000413951 SPTLC2O15270 562 aa18.36■□□□□ 0.53
SF1-207ENST00000413951 HNRNPA1P09651 372 aaKnown RBP eCLIP18.36■□□□□ 0.53
SF1-207ENST00000413951 AOC1P19801 751 aa18.36■□□□□ 0.53
SF1-207ENST00000413951 KRT85P78386 507 aa18.36■□□□□ 0.53
SF1-207ENST00000413951 STK38Q15208 465 aa18.36■□□□□ 0.53
SF1-207ENST00000413951 FOXD4L6Q3SYB3 417 aaPredicted RBP18.36■□□□□ 0.53
SF1-207ENST00000413951 LILRA6Q6PI73 481 aa18.36■□□□□ 0.53
SF1-207ENST00000413951 POTEGQ6S5H5 508 aa18.36■□□□□ 0.53
SF1-207ENST00000413951 FOXD4L3Q6VB84 417 aaPredicted RBP18.36■□□□□ 0.53
SF1-207ENST00000413951 RTL10Q7L3V2 364 aa18.36■□□□□ 0.53
SF1-207ENST00000413951 KCNG4Q8TDN1 519 aa18.36■□□□□ 0.53
SF1-207ENST00000413951 MMTAG2Q9BU76 263 aaKnown RBP18.36■□□□□ 0.53
SF1-207ENST00000413951 PDZD7Q9H5P4 517 aa18.36■□□□□ 0.53
SF1-207ENST00000413951 SNTG2Q9NY99 539 aa18.36■□□□□ 0.53
SF1-207ENST00000413951 KCNG1Q9UIX4 513 aa18.36■□□□□ 0.53
SF1-207ENST00000413951 A0A087WWV3 80 aa18.35■□□□□ 0.53
SF1-207ENST00000413951 SLC26A4O43511 780 aa18.35■□□□□ 0.53
SF1-207ENST00000413951 TRAPPC3O43617 180 aa18.35■□□□□ 0.53
SF1-207ENST00000413951 RFPL2O75678 378 aa18.35■□□□□ 0.53
SF1-207ENST00000413951 ZMYND10O75800 440 aa18.35■□□□□ 0.53
SF1-207ENST00000413951 MARCKSP29966 332 aaPredicted RBP18.35■□□□□ 0.53
SF1-207ENST00000413951 CCT6AP40227 531 aaKnown RBP18.35■□□□□ 0.53
SF1-207ENST00000413951 FAM171A1Q5VUB5 890 aa18.35■□□□□ 0.53
SF1-207ENST00000413951 KRI1Q8N9T8 703 aaKnown RBP18.35■□□□□ 0.53
SF1-207ENST00000413951 PIK3R5Q8WYR1 880 aa18.35■□□□□ 0.53
SF1-207ENST00000413951 CHAMP1Q96JM3 812 aa18.35■□□□□ 0.53
SF1-207ENST00000413951 UROC1Q96N76 676 aa18.35■□□□□ 0.53
SF1-207ENST00000413951 SMOC2Q9H3U7 446 aa18.35■□□□□ 0.53
SF1-207ENST00000413951 FAM86C1Q9NVL1 165 aa18.35■□□□□ 0.53
SF1-207ENST00000413951 DENND4AQ7Z401 1863 aa18.35■□□□□ 0.53
SF1-207ENST00000413951 PP2D1A8MPX8 630 aa18.34■□□□□ 0.53
SF1-207ENST00000413951 K7ERI5 159 aa18.34■□□□□ 0.53
SF1-207ENST00000413951 XYLBO75191 536 aa18.34■□□□□ 0.53
SF1-207ENST00000413951 RECQL4O94761 1208 aa18.34■□□□□ 0.53
SF1-207ENST00000413951 SRFP11831 508 aa18.34■□□□□ 0.53
SF1-207ENST00000413951 HOXA9P31269 272 aa18.34■□□□□ 0.53
SF1-207ENST00000413951 NBL1P41271 181 aa18.34■□□□□ 0.53
SF1-207ENST00000413951 PSMD5Q16401 504 aa18.34■□□□□ 0.53
SF1-207ENST00000413951 HYIQ5T013 277 aa18.34■□□□□ 0.53
SF1-207ENST00000413951 AXDND1Q5T1B0 1012 aaPredicted RBP18.34■□□□□ 0.53
SF1-207ENST00000413951 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.34■□□□□ 0.53
SF1-207ENST00000413951 CEP57Q86XR8 500 aa18.34■□□□□ 0.53
SF1-207ENST00000413951 SIX5Q8N196 739 aa18.34■□□□□ 0.53
SF1-207ENST00000413951 ZNF707Q96C28 371 aaPredicted RBP18.34■□□□□ 0.53
SF1-207ENST00000413951 CCDC113Q9H0I3 377 aa18.34■□□□□ 0.53
SF1-207ENST00000413951 TOPORSQ9NS56 1045 aaPredicted RBP18.34■□□□□ 0.53
SF1-207ENST00000413951 TDRD15B5MCY1 1934 aaKnown RBP18.33■□□□□ 0.53
SF1-207ENST00000413951 CASTOR2A6NHX0 329 aa18.33■□□□□ 0.52
SF1-207ENST00000413951 F8W810 466 aa18.33■□□□□ 0.52
SF1-207ENST00000413951 TMEM189-UBE2V1I3L0A0 370 aa18.33■□□□□ 0.52
SF1-207ENST00000413951 STK25O00506 426 aa18.33■□□□□ 0.52
SF1-207ENST00000413951 SPATA31D3P0C874 917 aa18.33■□□□□ 0.52
SF1-207ENST00000413951 LAMP2P13473 410 aa18.33■□□□□ 0.52
SF1-207ENST00000413951 LIG1P18858 919 aa18.33■□□□□ 0.52
SF1-207ENST00000413951 YARSP54577 528 aaKnown RBP18.33■□□□□ 0.52
SF1-207ENST00000413951 UVSSAQ2YD98 709 aa18.33■□□□□ 0.52
SF1-207ENST00000413951 PPM1LQ5SGD2 360 aa18.33■□□□□ 0.52
SF1-207ENST00000413951 ATF7IP2Q5U623 682 aa18.33■□□□□ 0.52
SF1-207ENST00000413951 KRT79Q5XKE5 535 aa18.33■□□□□ 0.52
SF1-207ENST00000413951 SPATA31D4Q6ZUB0 917 aa18.33■□□□□ 0.52
SF1-207ENST00000413951 SLC44A3Q8N4M1 653 aa18.33■□□□□ 0.52
SF1-207ENST00000413951 KCTD17Q8N5Z5 321 aa18.33■□□□□ 0.52
SF1-207ENST00000413951 SNX29Q8TEQ0 813 aa18.33■□□□□ 0.52
SF1-207ENST00000413951 LEO1Q8WVC0 666 aaPredicted RBP18.33■□□□□ 0.52
SF1-207ENST00000413951 B3GALT6Q96L58 329 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms