RNA–Protein interactions for RNA: ENST00000413911.1

AC005540.1-201, humanhuman

TSL 3 BASIC

Gene AC005540.1, Length 919 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005540.1-201ENST00000413911 NAMPTP43490 491 aa26.89■■□□□ 1.9
AC005540.1-201ENST00000413911 NT5DC1Q5TFE4 455 aa26.89■■□□□ 1.9
AC005540.1-201ENST00000413911 SNX27Q96L92 541 aa26.89■■□□□ 1.9
AC005540.1-201ENST00000413911 GDAQ9Y2T3 454 aa26.89■■□□□ 1.9
AC005540.1-201ENST00000413911 GVINP1Q7Z2Y8 2422 aa26.89■■□□□ 1.89
AC005540.1-201ENST00000413911 DCHS1Q96JQ0 3298 aa26.89■■□□□ 1.89
AC005540.1-201ENST00000413911 STK25O00506 426 aa26.88■■□□□ 1.89
AC005540.1-201ENST00000413911 FSHRP23945 695 aa26.88■■□□□ 1.89
AC005540.1-201ENST00000413911 TMEM132AQ24JP5 1023 aa26.88■■□□□ 1.89
AC005540.1-201ENST00000413911 CD300LGQ6UXG3 332 aa26.88■■□□□ 1.89
AC005540.1-201ENST00000413911 C4orf32Q8N8J7 132 aa26.88■■□□□ 1.89
AC005540.1-201ENST00000413911 DEPTORQ8TB45 409 aa26.88■■□□□ 1.89
AC005540.1-201ENST00000413911 NBR1Q14596 966 aa26.87■■□□□ 1.89
AC005540.1-201ENST00000413911 SAFBQ15424 915 aaKnown RBP eCLIP26.87■■□□□ 1.89
AC005540.1-201ENST00000413911 PARM1Q6UWI2 310 aa26.87■■□□□ 1.89
AC005540.1-201ENST00000413911 RSPO2Q6UXX9 243 aaPredicted RBP26.87■■□□□ 1.89
AC005540.1-201ENST00000413911 CCDC83Q8IWF9 413 aa26.87■■□□□ 1.89
AC005540.1-201ENST00000413911 FGF14Q92915 247 aa26.87■■□□□ 1.89
AC005540.1-201ENST00000413911 C8orf76Q96K31 380 aa26.87■■□□□ 1.89
AC005540.1-201ENST00000413911 CCL16O15467 120 aa26.86■■□□□ 1.89
AC005540.1-201ENST00000413911 C8AP07357 584 aa26.86■■□□□ 1.89
AC005540.1-201ENST00000413911 GLRA4Q5JXX5 417 aa26.86■■□□□ 1.89
AC005540.1-201ENST00000413911 ERMNQ8TAM6 284 aa26.86■■□□□ 1.89
AC005540.1-201ENST00000413911 PPP1R10Q96QC0 940 aaKnown RBP26.86■■□□□ 1.89
AC005540.1-201ENST00000413911 SLC2A4RGQ9NR83 387 aa26.86■■□□□ 1.89
AC005540.1-201ENST00000413911 DLGAP2Q9P1A6 1054 aa26.86■■□□□ 1.89
AC005540.1-201ENST00000413911 COL4A3Q01955 1670 aa26.85■■□□□ 1.89
AC005540.1-201ENST00000413911 ZNF292O60281 2723 aa26.85■■□□□ 1.89
AC005540.1-201ENST00000413911 NEFLP07196 543 aa26.85■■□□□ 1.89
AC005540.1-201ENST00000413911 DCNP07585 359 aaKnown RBP26.85■■□□□ 1.89
AC005540.1-201ENST00000413911 HNRNPA1P09651 372 aaKnown RBP eCLIP26.85■■□□□ 1.89
AC005540.1-201ENST00000413911 FGFR3P22607 806 aa26.85■■□□□ 1.89
AC005540.1-201ENST00000413911 TTC38Q5R3I4 469 aa26.85■■□□□ 1.89
AC005540.1-201ENST00000413911 ADSSL1Q8N142 457 aa26.85■■□□□ 1.89
AC005540.1-201ENST00000413911 ITFG1Q8TB96 612 aa26.85■■□□□ 1.89
AC005540.1-201ENST00000413911 ADPGKQ9BRR6 497 aa26.85■■□□□ 1.89
AC005540.1-201ENST00000413911 BHMT2Q9H2M3 363 aa26.85■■□□□ 1.89
AC005540.1-201ENST00000413911 FOXP1Q9H334 677 aaPredicted RBP26.85■■□□□ 1.89
AC005540.1-201ENST00000413911 ARHGEF3Q9NR81 526 aa26.85■■□□□ 1.89
AC005540.1-201ENST00000413911 ORC2Q13416 577 aaPredicted RBP26.84■■□□□ 1.89
AC005540.1-201ENST00000413911 PPM1LQ5SGD2 360 aa26.84■■□□□ 1.89
AC005540.1-201ENST00000413911 LIN9Q5TKA1 542 aa26.84■■□□□ 1.89
AC005540.1-201ENST00000413911 C3orf58Q8NDZ4 430 aa26.84■■□□□ 1.89
AC005540.1-201ENST00000413911 GOLGA2P5Q9HBQ8 144 aa26.84■■□□□ 1.89
AC005540.1-201ENST00000413911 HCFC1R1Q9NWW0 138 aa26.84■■□□□ 1.89
AC005540.1-201ENST00000413911 CDH7Q9ULB5 785 aa26.84■■□□□ 1.89
AC005540.1-201ENST00000413911 LIMCH1Q9UPQ0 1083 aa26.84■■□□□ 1.89
AC005540.1-201ENST00000413911 NOTCH4Q99466 2003 aa26.83■■□□□ 1.89
AC005540.1-201ENST00000413911 OR1D2P34982 312 aa26.83■■□□□ 1.89
AC005540.1-201ENST00000413911 CCT6AP40227 531 aaKnown RBP26.83■■□□□ 1.89
AC005540.1-201ENST00000413911 CLCNKBP51801 687 aa26.83■■□□□ 1.89
AC005540.1-201ENST00000413911 GPC5P78333 572 aa26.83■■□□□ 1.89
AC005540.1-201ENST00000413911 ELAVL2Q12926 359 aaKnown RBP26.83■■□□□ 1.89
AC005540.1-201ENST00000413911 RAB33AQ14088 237 aa26.83■■□□□ 1.89
AC005540.1-201ENST00000413911 PPP2R5AQ15172 486 aa26.83■■□□□ 1.89
AC005540.1-201ENST00000413911 DCAF4L1Q3SXM0 396 aa26.83■■□□□ 1.89
AC005540.1-201ENST00000413911 SPECC1Q5M775 1068 aa26.83■■□□□ 1.89
AC005540.1-201ENST00000413911 ATF7IP2Q5U623 682 aa26.83■■□□□ 1.89
AC005540.1-201ENST00000413911 PHLDB3Q6NSJ2 640 aa26.83■■□□□ 1.89
AC005540.1-201ENST00000413911 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.83■■□□□ 1.89
AC005540.1-201ENST00000413911 CEP120Q8N960 986 aa26.83■■□□□ 1.89
AC005540.1-201ENST00000413911 FBXO18Q8NFZ0 1043 aa26.83■■□□□ 1.89
AC005540.1-201ENST00000413911 SLC7A14Q8TBB6 771 aa26.83■■□□□ 1.89
AC005540.1-201ENST00000413911 FGF13Q92913 245 aa26.83■■□□□ 1.89
AC005540.1-201ENST00000413911 KIAA1024Q9UPX6 916 aa26.83■■□□□ 1.89
AC005540.1-201ENST00000413911 FRYLO94915 3013 aa26.82■■□□□ 1.88
AC005540.1-201ENST00000413911 TRIP11Q15643 1979 aa26.82■■□□□ 1.88
AC005540.1-201ENST00000413911 TMEM189-UBE2V1I3L0A0 370 aa26.82■■□□□ 1.88
AC005540.1-201ENST00000413911 I3L4J1 428 aa26.82■■□□□ 1.88
AC005540.1-201ENST00000413911 GLULP15104 373 aa26.82■■□□□ 1.88
AC005540.1-201ENST00000413911 MUTP22033 750 aa26.82■■□□□ 1.88
AC005540.1-201ENST00000413911 HOXA9P31269 272 aa26.82■■□□□ 1.88
AC005540.1-201ENST00000413911 FXR2P51116 673 aaKnown RBP eCLIP26.82■■□□□ 1.88
AC005540.1-201ENST00000413911 AXDND1Q5T1B0 1012 aaPredicted RBP26.82■■□□□ 1.88
AC005540.1-201ENST00000413911 DCLRE1AQ6PJP8 1040 aa26.82■■□□□ 1.88
AC005540.1-201ENST00000413911 FOXQ1Q9C009 403 aa26.82■■□□□ 1.88
AC005540.1-201ENST00000413911 PPP4R2Q9NY27 417 aa26.82■■□□□ 1.88
AC005540.1-201ENST00000413911 MTRRQ9UBK8 725 aa26.82■■□□□ 1.88
AC005540.1-201ENST00000413911 POLIQ9UNA4 740 aa26.82■■□□□ 1.88
AC005540.1-201ENST00000413911 ZFP37Q9Y6Q3 630 aaPredicted RBP26.82■■□□□ 1.88
AC005540.1-201ENST00000413911 MYH15Q9Y2K3 1946 aa26.81■■□□□ 1.88
AC005540.1-201ENST00000413911 LRRN2O75325 713 aa26.81■■□□□ 1.88
AC005540.1-201ENST00000413911 B3GAT3O94766 335 aa26.81■■□□□ 1.88
AC005540.1-201ENST00000413911 RFX1P22670 979 aa26.81■■□□□ 1.88
AC005540.1-201ENST00000413911 TKTP29401 623 aaKnown RBP26.81■■□□□ 1.88
AC005540.1-201ENST00000413911 RBM25P49756 843 aaKnown RBP26.81■■□□□ 1.88
AC005540.1-201ENST00000413911 EFNA5P52803 228 aa26.81■■□□□ 1.88
AC005540.1-201ENST00000413911 SOX4Q06945 474 aaPredicted RBP26.81■■□□□ 1.88
AC005540.1-201ENST00000413911 UPP1Q16831 310 aa26.81■■□□□ 1.88
AC005540.1-201ENST00000413911 POTEHQ6S545 545 aa26.81■■□□□ 1.88
AC005540.1-201ENST00000413911 DAW1Q8N136 415 aa26.81■■□□□ 1.88
AC005540.1-201ENST00000413911 IFT74Q96LB3 600 aa26.81■■□□□ 1.88
AC005540.1-201ENST00000413911 LLPHQ9BRT6 129 aaKnown RBP26.81■■□□□ 1.88
AC005540.1-201ENST00000413911 DNMT3BQ9UBC3 853 aaKnown RBP26.81■■□□□ 1.88
AC005540.1-201ENST00000413911 SIT1Q9Y3P8 196 aa26.81■■□□□ 1.88
AC005540.1-201ENST00000413911 R4GN57 208 aa26.81■■□□□ 1.88
AC005540.1-201ENST00000413911 EP300Q09472 2414 aaPredicted RBP26.8■■□□□ 1.88
AC005540.1-201ENST00000413911 BRCC3P46736 316 aa26.8■■□□□ 1.88
AC005540.1-201ENST00000413911 TOB1P50616 345 aaPredicted RBP26.8■■□□□ 1.88
AC005540.1-201ENST00000413911 HAUS3Q68CZ6 603 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms