RNA–Protein interactions for RNA: ENST00000413305.5

SSUH2-203, Transcript of ssu-2 homolog (C. elegans), humanhuman

TSL 1 (best)

Gene SSUH2, Length 1,874 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSUH2-203ENST00000413305 ZNF554Q86TJ5 538 aa14.54□□□□□ -0.08
SSUH2-203ENST00000413305 ZC3H18Q86VM9 953 aaKnown RBP14.54□□□□□ -0.08
SSUH2-203ENST00000413305 ST13P4Q8IZP2 240 aaPredicted RBP14.54□□□□□ -0.08
SSUH2-203ENST00000413305 KCTD17Q8N5Z5 321 aa14.54□□□□□ -0.08
SSUH2-203ENST00000413305 ACER1Q8TDN7 264 aa14.54□□□□□ -0.08
SSUH2-203ENST00000413305 CHURC1Q8WUH1 139 aa14.54□□□□□ -0.08
SSUH2-203ENST00000413305 GINM1Q9NU53 330 aa14.54□□□□□ -0.08
SSUH2-203ENST00000413305 FGFR1OP2Q9NVK5 253 aa14.54□□□□□ -0.08
SSUH2-203ENST00000413305 MTRF1LQ9UGC7 380 aaKnown RBP14.54□□□□□ -0.08
SSUH2-203ENST00000413305 SUN2Q9UH99 717 aa14.54□□□□□ -0.08
SSUH2-203ENST00000413305 INTUQ9ULD6 942 aa14.54□□□□□ -0.08
SSUH2-203ENST00000413305 SIK3Q9Y2K2 1263 aa14.54□□□□□ -0.08
SSUH2-203ENST00000413305 SH3GLB1Q9Y371 365 aa14.54□□□□□ -0.08
SSUH2-203ENST00000413305 LTBP3Q9NS15 1303 aa14.53□□□□□ -0.08
SSUH2-203ENST00000413305 LRRC53A6NM62 1247 aa14.53□□□□□ -0.08
SSUH2-203ENST00000413305 WNT10BO00744 389 aa14.53□□□□□ -0.08
SSUH2-203ENST00000413305 TRAFD1O14545 582 aaPredicted RBP14.53□□□□□ -0.08
SSUH2-203ENST00000413305 MARCH6O60337 910 aa14.53□□□□□ -0.08
SSUH2-203ENST00000413305 UPP2O95045 317 aa14.53□□□□□ -0.08
SSUH2-203ENST00000413305 AFPP02771 609 aaKnown RBP14.53□□□□□ -0.08
SSUH2-203ENST00000413305 FCER1AP12319 257 aa14.53□□□□□ -0.08
SSUH2-203ENST00000413305 EIF4BP23588 611 aaKnown RBP14.53□□□□□ -0.08
SSUH2-203ENST00000413305 DRG2P55039 364 aaKnown RBP14.53□□□□□ -0.08
SSUH2-203ENST00000413305 INHBCP55103 352 aa14.53□□□□□ -0.08
SSUH2-203ENST00000413305 CBX3Q13185 183 aa14.53□□□□□ -0.08
SSUH2-203ENST00000413305 MAN2A1Q16706 1144 aa14.53□□□□□ -0.08
SSUH2-203ENST00000413305 DALRD3Q5D0E6 543 aaKnown RBP14.53□□□□□ -0.08
SSUH2-203ENST00000413305 MIIPQ5JXC2 388 aa14.53□□□□□ -0.08
SSUH2-203ENST00000413305 KIAA1755Q5JYT7 1200 aa14.53□□□□□ -0.08
SSUH2-203ENST00000413305 FOXB2Q5VYV0 432 aa14.53□□□□□ -0.08
SSUH2-203ENST00000413305 RINLQ6ZS11 566 aa14.53□□□□□ -0.08
SSUH2-203ENST00000413305 SEPT14Q6ZU15 432 aa14.53□□□□□ -0.08
SSUH2-203ENST00000413305 ARMCX6Q7L4S7 300 aa14.53□□□□□ -0.08
SSUH2-203ENST00000413305 MAEAQ7L5Y9 396 aa14.53□□□□□ -0.08
SSUH2-203ENST00000413305 KCNK18Q7Z418 384 aa14.53□□□□□ -0.08
SSUH2-203ENST00000413305 CCDC125Q86Z20 511 aa14.53□□□□□ -0.08
SSUH2-203ENST00000413305 SYCE1Q8N0S2 351 aa14.53□□□□□ -0.08
SSUH2-203ENST00000413305 RASGEF1CQ8N431 466 aa14.53□□□□□ -0.08
SSUH2-203ENST00000413305 TUBB6Q9BUF5 446 aa14.53□□□□□ -0.08
SSUH2-203ENST00000413305 PHACTR1Q9C0D0 580 aa14.53□□□□□ -0.08
SSUH2-203ENST00000413305 TMEM39BQ9GZU3 492 aa14.53□□□□□ -0.08
SSUH2-203ENST00000413305 DEFB129Q9H1M3 183 aa14.53□□□□□ -0.08
SSUH2-203ENST00000413305 DPH5Q9H2P9 285 aa14.53□□□□□ -0.08
SSUH2-203ENST00000413305 SALL4Q9UJQ4 1053 aa14.53□□□□□ -0.08
SSUH2-203ENST00000413305 ZMYND8Q9ULU4 1186 aaPredicted RBP14.53□□□□□ -0.08
SSUH2-203ENST00000413305 PASKQ96RG2 1323 aa14.53□□□□□ -0.08
SSUH2-203ENST00000413305 MAPK13O15264 365 aa14.52□□□□□ -0.08
SSUH2-203ENST00000413305 ZNF189O75820 626 aaPredicted RBP14.52□□□□□ -0.08
SSUH2-203ENST00000413305 SHBGP04278 402 aa14.52□□□□□ -0.08
SSUH2-203ENST00000413305 ASNSP08243 561 aa14.52□□□□□ -0.08
SSUH2-203ENST00000413305 MARK3P27448 753 aa14.52□□□□□ -0.08
SSUH2-203ENST00000413305 IFNAR2P48551 515 aa14.52□□□□□ -0.08
SSUH2-203ENST00000413305 KLK7P49862 253 aa14.52□□□□□ -0.08
SSUH2-203ENST00000413305 USP46P62068 366 aa14.52□□□□□ -0.08
SSUH2-203ENST00000413305 PHEXP78562 749 aa14.52□□□□□ -0.08
SSUH2-203ENST00000413305 LRRC63Q05C16 580 aa14.52□□□□□ -0.08
SSUH2-203ENST00000413305 GFPT1Q06210 699 aaPredicted RBP14.52□□□□□ -0.08
SSUH2-203ENST00000413305 ITGA9Q13797 1035 aa14.52□□□□□ -0.08
SSUH2-203ENST00000413305 TNIP1Q15025 636 aa14.52□□□□□ -0.08
SSUH2-203ENST00000413305 ECM1Q16610 540 aa14.52□□□□□ -0.08
SSUH2-203ENST00000413305 LIN52Q52LA3 116 aa14.52□□□□□ -0.08
SSUH2-203ENST00000413305 SFMBT2Q5VUG0 894 aa14.52□□□□□ -0.08
SSUH2-203ENST00000413305 PHLDB3Q6NSJ2 640 aa14.52□□□□□ -0.08
SSUH2-203ENST00000413305 DDX42Q86XP3 938 aaKnown RBP eCLIP14.52□□□□□ -0.08
SSUH2-203ENST00000413305 ANKRD13CQ8N6S4 541 aa14.52□□□□□ -0.08
SSUH2-203ENST00000413305 CKAP2Q8WWK9 683 aa14.52□□□□□ -0.08
SSUH2-203ENST00000413305 DDX12PQ92771 950 aa14.52□□□□□ -0.08
SSUH2-203ENST00000413305 DNAJC19Q96DA6 116 aa14.52□□□□□ -0.08
SSUH2-203ENST00000413305 AGAP3Q96P47 875 aa14.52□□□□□ -0.08
SSUH2-203ENST00000413305 MYOZ2Q9NPC6 264 aa14.52□□□□□ -0.08
SSUH2-203ENST00000413305 ZNF212Q9UDV6 495 aa14.52□□□□□ -0.08
SSUH2-203ENST00000413305 PNMA3Q9UL41 463 aa14.52□□□□□ -0.08
SSUH2-203ENST00000413305 NOC2LQ9Y3T9 749 aaKnown RBP14.52□□□□□ -0.08
SSUH2-203ENST00000413305 SMIM31A0A1B0GVY4 71 aa14.52□□□□□ -0.09
SSUH2-203ENST00000413305 SIGLEC16A6NMB1 481 aa14.52□□□□□ -0.09
SSUH2-203ENST00000413305 ATP9BO43861 1147 aa14.52□□□□□ -0.09
SSUH2-203ENST00000413305 ZNF24P17028 368 aa14.52□□□□□ -0.09
SSUH2-203ENST00000413305 POLGP54098 1239 aaPredicted RBP14.52□□□□□ -0.09
SSUH2-203ENST00000413305 AP1B1Q10567 949 aa14.52□□□□□ -0.09
SSUH2-203ENST00000413305 TNFAIP1Q13829 316 aa14.52□□□□□ -0.09
SSUH2-203ENST00000413305 DHX34Q14147 1143 aaKnown RBP14.52□□□□□ -0.09
SSUH2-203ENST00000413305 TNFAIP8L3Q5GJ75 292 aa14.52□□□□□ -0.09
SSUH2-203ENST00000413305 FAM83BQ5T0W9 1011 aa14.52□□□□□ -0.09
SSUH2-203ENST00000413305 ANKRD40Q6AI12 368 aa14.52□□□□□ -0.09
SSUH2-203ENST00000413305 NELFCDQ8IXH7 590 aa14.52□□□□□ -0.09
SSUH2-203ENST00000413305 CCDC65Q8IXS2 484 aa14.52□□□□□ -0.09
SSUH2-203ENST00000413305 UTP4Q969X6 686 aaKnown RBP14.52□□□□□ -0.09
SSUH2-203ENST00000413305 HAUS1Q96CS2 278 aa14.52□□□□□ -0.09
SSUH2-203ENST00000413305 MTFR1LQ9H019 292 aa14.52□□□□□ -0.09
SSUH2-203ENST00000413305 UNC45AQ9H3U1 944 aa14.52□□□□□ -0.09
SSUH2-203ENST00000413305 MMRN2Q9H8L6 949 aa14.52□□□□□ -0.09
SSUH2-203ENST00000413305 PRDM16Q9HAZ2 1276 aa14.52□□□□□ -0.09
SSUH2-203ENST00000413305 TBCCD1Q9NVR7 557 aa14.52□□□□□ -0.09
SSUH2-203ENST00000413305 FEM1BQ9UK73 627 aa14.52□□□□□ -0.09
SSUH2-203ENST00000413305 TTC7AQ9ULT0 858 aaPredicted RBP14.52□□□□□ -0.09
SSUH2-203ENST00000413305 USH1CQ9Y6N9 552 aa14.52□□□□□ -0.09
SSUH2-203ENST00000413305 RBBP6Q7Z6E9 1792 aaKnown RBP14.52□□□□□ -0.09
SSUH2-203ENST00000413305 PITPNM2Q9BZ72 1349 aa14.51□□□□□ -0.09
SSUH2-203ENST00000413305 TLDC2A0PJX2 215 aa14.51□□□□□ -0.09
SSUH2-203ENST00000413305 RASGRF2O14827 1237 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms