RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 RAB20Q9NX57 234 aa9.01□□□□□ -0.97
PBRM1-209ENST00000412587 MTMR4Q9NYA4 1195 aa9.01□□□□□ -0.97
PBRM1-209ENST00000412587 ZNF229Q9UJW7 825 aa9.01□□□□□ -0.97
PBRM1-209ENST00000412587 TTLL3Q9Y4R7 772 aa9.01□□□□□ -0.97
PBRM1-209ENST00000412587 CLPTM1O96005 669 aa9.01□□□□□ -0.97
PBRM1-209ENST00000412587 STAT3P40763 770 aa9.01□□□□□ -0.97
PBRM1-209ENST00000412587 CARSP49589 748 aaKnown RBP9.01□□□□□ -0.97
PBRM1-209ENST00000412587 PEX3P56589 373 aa9.01□□□□□ -0.97
PBRM1-209ENST00000412587 EXOSC10Q01780 885 aaKnown RBP9.01□□□□□ -0.97
PBRM1-209ENST00000412587 LRRC14Q15048 493 aa9.01□□□□□ -0.97
PBRM1-209ENST00000412587 CEP55Q53EZ4 464 aa9.01□□□□□ -0.97
PBRM1-209ENST00000412587 TCP11X2Q5H9J9 407 aa9.01□□□□□ -0.97
PBRM1-209ENST00000412587 CDC42EP5Q6NZY7 148 aa9.01□□□□□ -0.97
PBRM1-209ENST00000412587 RSBN1LQ6PCB5 846 aaPredicted RBP9.01□□□□□ -0.97
PBRM1-209ENST00000412587 NCCRP1Q6ZVX7 275 aaPredicted RBP9.01□□□□□ -0.97
PBRM1-209ENST00000412587 CCDC89Q8N998 374 aa9.01□□□□□ -0.97
PBRM1-209ENST00000412587 PPP2R3CQ969Q6 453 aa9.01□□□□□ -0.97
PBRM1-209ENST00000412587 TRIM56Q9BRZ2 755 aaKnown RBP9.01□□□□□ -0.97
PBRM1-209ENST00000412587 ASCC2Q9H1I8 757 aaPredicted RBP9.01□□□□□ -0.97
PBRM1-209ENST00000412587 CYP39A1Q9NYL5 469 aa9.01□□□□□ -0.97
PBRM1-209ENST00000412587 MEGF6O75095 1541 aa9.01□□□□□ -0.97
PBRM1-209ENST00000412587 GOLGA8CPA6NN73 597 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 TEX33O43247 280 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 MSL3P1P0C860 447 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 DPEP1P16444 411 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 SP100P23497 879 aaPredicted RBP9□□□□□ -0.97
PBRM1-209ENST00000412587 PRELPP51888 382 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 DR1Q01658 176 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 LRRC63Q05C16 580 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 LGSNQ5TDP6 509 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 DEFB132Q7Z7B7 95 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 MCPH1Q8NEM0 835 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 OMA1Q96E52 524 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 FAM49AQ9H0Q0 323 aaPredicted RBP9□□□□□ -0.97
PBRM1-209ENST00000412587 ACAD9Q9H845 621 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 TMEM131LA2VDJ0 1609 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 MATN2O00339 956 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 LDHAP00338 332 aaKnown RBP9□□□□□ -0.97
PBRM1-209ENST00000412587 CAPN1P07384 714 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 BRAFP15056 766 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 HMGCS2P54868 508 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 IFRD2Q12894 506 aaPredicted RBP9□□□□□ -0.97
PBRM1-209ENST00000412587 ORC2Q13416 577 aaPredicted RBP9□□□□□ -0.97
PBRM1-209ENST00000412587 PTPROQ16827 1216 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 RARS2Q5T160 578 aaKnown RBP9□□□□□ -0.97
PBRM1-209ENST00000412587 CAPN12Q6ZSI9 719 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 GIMAP8Q8ND71 665 aaPredicted RBP9□□□□□ -0.97
PBRM1-209ENST00000412587 GRK7Q8WTQ7 553 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 CFAP36Q96G28 342 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 FAM167AQ96KS9 214 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 RXFP1Q9HBX9 757 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 PREBQ9HCU5 417 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 DDX18Q9NVP1 670 aaKnown RBP9□□□□□ -0.97
PBRM1-209ENST00000412587 LRRN2O75325 713 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 GYS1P13807 737 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 EIF4A3P38919 411 aaKnown RBP9□□□□□ -0.97
PBRM1-209ENST00000412587 HDAC4P56524 1084 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 NR1H3Q13133 447 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 PPP2R5DQ14738 602 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 C16orf72Q14CZ0 275 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 RNF220Q5VTB9 566 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 UNC13DQ70J99 1090 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 MARK2Q7KZI7 788 aaKnown RBP9□□□□□ -0.97
PBRM1-209ENST00000412587 ZBTB33Q86T24 672 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 MB21D1Q8N884 522 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 GADD45GIP1Q8TAE8 222 aaPredicted RBP9□□□□□ -0.97
PBRM1-209ENST00000412587 MXD3Q9BW11 206 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 EBF2Q9HAK2 575 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 LMCD1Q9NZU5 365 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 ITIH6Q6UXX5 1313 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 IQGAP1P46940 1657 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 SFI1A8K8P3 1242 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 WFS1O76024 890 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 MYCP01106 439 aaPredicted RBP9□□□□□ -0.97
PBRM1-209ENST00000412587 OSTNP61366 133 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 PAPD7Q5XG87 772 aaKnown RBP9□□□□□ -0.97
PBRM1-209ENST00000412587 PPP4R3CPQ6ZMV5 832 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 LDHDQ86WU2 507 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 ATL2Q8NHH9 583 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 PPP1R16BQ96T49 567 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 SERPINI1Q99574 410 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 THAP9Q9H5L6 903 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 SLITRK6Q9H5Y7 841 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 RPAP3Q9H6T3 665 aaPredicted RBP9□□□□□ -0.97
PBRM1-209ENST00000412587 RABL2AQ9UBK7 228 aaPredicted RBP9□□□□□ -0.97
PBRM1-209ENST00000412587 ZNF70Q9UC06 446 aaPredicted RBP9□□□□□ -0.97
PBRM1-209ENST00000412587 HBS1LQ9Y450 684 aaKnown RBP9□□□□□ -0.97
PBRM1-209ENST00000412587 RPS6KL1Q9Y6S9 549 aa9□□□□□ -0.97
PBRM1-209ENST00000412587 A0A0G2JND7 137 aa8.99□□□□□ -0.97
PBRM1-209ENST00000412587 SERPINB1P30740 379 aa8.99□□□□□ -0.97
PBRM1-209ENST00000412587 CNGA3Q16281 694 aa8.99□□□□□ -0.97
PBRM1-209ENST00000412587 CASC4Q6P4E1 433 aa8.99□□□□□ -0.97
PBRM1-209ENST00000412587 SRBD1Q8N5C6 995 aaKnown RBP8.99□□□□□ -0.97
PBRM1-209ENST00000412587 OR2W6PQ8NHA6 318 aa8.99□□□□□ -0.97
PBRM1-209ENST00000412587 RBM46Q8TBY0 533 aaKnown RBP8.99□□□□□ -0.97
PBRM1-209ENST00000412587 FAM151AQ8WW52 585 aa8.99□□□□□ -0.97
PBRM1-209ENST00000412587 SCG3Q8WXD2 468 aaKnown RBP8.99□□□□□ -0.97
PBRM1-209ENST00000412587 PRCCQ92733 491 aaPredicted RBP8.99□□□□□ -0.97
PBRM1-209ENST00000412587 EFHD1Q9BUP0 239 aa8.99□□□□□ -0.97
PBRM1-209ENST00000412587 NXF1Q9UBU9 619 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms