RNA–Protein interactions for RNA: ENST00000411849.1

HMGN1P20-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 20, humanhuman

BASIC

Gene HMGN1P20, Length 300 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P20-201ENST00000411849 NPAS3Q8IXF0 933 aa6.69□□□□□ -1.34
HMGN1P20-201ENST00000411849 ZFP42Q96MM3 310 aa6.69□□□□□ -1.34
HMGN1P20-201ENST00000411849 TTPALQ9BTX7 342 aa6.69□□□□□ -1.34
HMGN1P20-201ENST00000411849 C22orf23Q9BZE7 217 aa6.69□□□□□ -1.34
HMGN1P20-201ENST00000411849 GPR62Q9BZJ7 368 aa6.69□□□□□ -1.34
HMGN1P20-201ENST00000411849 CHRDQ9H2X0 955 aa6.69□□□□□ -1.34
HMGN1P20-201ENST00000411849 MINDY3Q9H8M7 445 aa6.69□□□□□ -1.34
HMGN1P20-201ENST00000411849 SEMA4GQ9NTN9 838 aa6.69□□□□□ -1.34
HMGN1P20-201ENST00000411849 GDE1Q9NZC3 331 aa6.69□□□□□ -1.34
HMGN1P20-201ENST00000411849 PLA2G2EQ9NZK7 142 aa6.69□□□□□ -1.34
HMGN1P20-201ENST00000411849 BRPF3Q9ULD4 1205 aa6.69□□□□□ -1.34
HMGN1P20-201ENST00000411849 GIT1Q9Y2X7 761 aa6.69□□□□□ -1.34
HMGN1P20-201ENST00000411849 ATRXP46100 2492 aa6.69□□□□□ -1.34
HMGN1P20-201ENST00000411849 F5P12259 2224 aa6.68□□□□□ -1.34
HMGN1P20-201ENST00000411849 CITO14578 2027 aa6.68□□□□□ -1.34
HMGN1P20-201ENST00000411849 KLF18A0A0U1RQI7 1052 aa6.68□□□□□ -1.34
HMGN1P20-201ENST00000411849 CCL16O15467 120 aa6.68□□□□□ -1.34
HMGN1P20-201ENST00000411849 PRPF3O43395 683 aaKnown RBP6.68□□□□□ -1.34
HMGN1P20-201ENST00000411849 TSPAN1O60635 241 aa6.68□□□□□ -1.34
HMGN1P20-201ENST00000411849 TDGF1P13385 188 aa6.68□□□□□ -1.34
HMGN1P20-201ENST00000411849 PMLP29590 882 aa6.68□□□□□ -1.34
HMGN1P20-201ENST00000411849 QARSP47897 775 aaKnown RBP6.68□□□□□ -1.34
HMGN1P20-201ENST00000411849 FGD1P98174 961 aa6.68□□□□□ -1.34
HMGN1P20-201ENST00000411849 AKAP17AQ02040 695 aaKnown RBP6.68□□□□□ -1.34
HMGN1P20-201ENST00000411849 ELAVL2Q12926 359 aaKnown RBP6.68□□□□□ -1.34
HMGN1P20-201ENST00000411849 FZD5Q13467 585 aa6.68□□□□□ -1.34
HMGN1P20-201ENST00000411849 COL9A2Q14055 689 aaPredicted RBP6.68□□□□□ -1.34
HMGN1P20-201ENST00000411849 TFDP1Q14186 410 aa6.68□□□□□ -1.34
HMGN1P20-201ENST00000411849 SIM2Q14190 667 aaPredicted RBP6.68□□□□□ -1.34
HMGN1P20-201ENST00000411849 HSP90AA2PQ14568 343 aaPredicted RBP6.68□□□□□ -1.34
HMGN1P20-201ENST00000411849 MXD4Q14582 209 aaPredicted RBP6.68□□□□□ -1.34
HMGN1P20-201ENST00000411849 Q4G0T1 1027 aa6.68□□□□□ -1.34
HMGN1P20-201ENST00000411849 RTP2Q5QGT7 225 aa6.68□□□□□ -1.34
HMGN1P20-201ENST00000411849 AXDND1Q5T1B0 1012 aaPredicted RBP6.68□□□□□ -1.34
HMGN1P20-201ENST00000411849 PLA2G4FQ68DD2 849 aa6.68□□□□□ -1.34
HMGN1P20-201ENST00000411849 DHX32Q7L7V1 743 aaKnown RBP6.68□□□□□ -1.34
HMGN1P20-201ENST00000411849 RNF149Q8NC42 400 aa6.68□□□□□ -1.34
HMGN1P20-201ENST00000411849 ITFG1Q8TB96 612 aa6.68□□□□□ -1.34
HMGN1P20-201ENST00000411849 SLC7A14Q8TBB6 771 aa6.68□□□□□ -1.34
HMGN1P20-201ENST00000411849 TMC2Q8TDI7 906 aa6.68□□□□□ -1.34
HMGN1P20-201ENST00000411849 PIK3R5Q8WYR1 880 aa6.68□□□□□ -1.34
HMGN1P20-201ENST00000411849 ELSPBP1Q96BH3 223 aa6.68□□□□□ -1.34
HMGN1P20-201ENST00000411849 CEP170P1Q96L14 293 aa6.68□□□□□ -1.34
HMGN1P20-201ENST00000411849 CLSTN3Q9BQT9 956 aa6.68□□□□□ -1.34
HMGN1P20-201ENST00000411849 APOL6Q9BWW8 343 aa6.68□□□□□ -1.34
HMGN1P20-201ENST00000411849 EIF2AQ9BY44 585 aaKnown RBP6.68□□□□□ -1.34
HMGN1P20-201ENST00000411849 LSG1Q9H089 658 aaKnown RBP6.68□□□□□ -1.34
HMGN1P20-201ENST00000411849 CSRNP2Q9H175 543 aa6.68□□□□□ -1.34
HMGN1P20-201ENST00000411849 DHX33Q9H6R0 707 aaKnown RBP6.68□□□□□ -1.34
HMGN1P20-201ENST00000411849 BRD9Q9H8M2 597 aa6.68□□□□□ -1.34
HMGN1P20-201ENST00000411849 SH2B1Q9NRF2 756 aaPredicted RBP6.68□□□□□ -1.34
HMGN1P20-201ENST00000411849 HEBP1Q9NRV9 189 aa6.68□□□□□ -1.34
HMGN1P20-201ENST00000411849 NAP1L2Q9ULW6 460 aaPredicted RBP6.68□□□□□ -1.34
HMGN1P20-201ENST00000411849 NDRG2Q9UN36 371 aaKnown RBP6.68□□□□□ -1.34
HMGN1P20-201ENST00000411849 MRPS23Q9Y3D9 190 aaKnown RBP6.68□□□□□ -1.34
HMGN1P20-201ENST00000411849 HES2Q9Y543 173 aa6.68□□□□□ -1.34
HMGN1P20-201ENST00000411849 NUP205Q92621 2012 aa6.67□□□□□ -1.34
HMGN1P20-201ENST00000411849 CYP3A7-CYP3A51PA0A087WV96 503 aa6.67□□□□□ -1.34
HMGN1P20-201ENST00000411849 INO80B-WBP1J3KQ70 363 aa6.67□□□□□ -1.34
HMGN1P20-201ENST00000411849 ADAMTS3O15072 1205 aa6.67□□□□□ -1.34
HMGN1P20-201ENST00000411849 HMGB1P09429 215 aaKnown RBP6.67□□□□□ -1.34
HMGN1P20-201ENST00000411849 CYP3A7P24462 503 aa6.67□□□□□ -1.34
HMGN1P20-201ENST00000411849 CDC27P30260 824 aa6.67□□□□□ -1.34
HMGN1P20-201ENST00000411849 CXCL12P48061 93 aa6.67□□□□□ -1.34
HMGN1P20-201ENST00000411849 LIMK1P53667 647 aa6.67□□□□□ -1.34
HMGN1P20-201ENST00000411849 NPEPPSP55786 919 aa6.67□□□□□ -1.34
HMGN1P20-201ENST00000411849 PTENP60484 403 aa6.67□□□□□ -1.34
HMGN1P20-201ENST00000411849 FOXK1P85037 733 aa6.67□□□□□ -1.34
HMGN1P20-201ENST00000411849 EXOSC10Q01780 885 aaKnown RBP6.67□□□□□ -1.34
HMGN1P20-201ENST00000411849 TUSC3Q13454 348 aa6.67□□□□□ -1.34
HMGN1P20-201ENST00000411849 RAB33AQ14088 237 aa6.67□□□□□ -1.34
HMGN1P20-201ENST00000411849 EMC2Q15006 297 aa6.67□□□□□ -1.34
HMGN1P20-201ENST00000411849 FAM171A1Q5VUB5 890 aa6.67□□□□□ -1.34
HMGN1P20-201ENST00000411849 SLC27A1Q6PCB7 646 aa6.67□□□□□ -1.34
HMGN1P20-201ENST00000411849 B3GNT9Q6UX72 402 aa6.67□□□□□ -1.34
HMGN1P20-201ENST00000411849 OTUD6AQ7L8S5 288 aa6.67□□□□□ -1.34
HMGN1P20-201ENST00000411849 FERMT3Q86UX7 667 aa6.67□□□□□ -1.34
HMGN1P20-201ENST00000411849 CEP57Q86XR8 500 aa6.67□□□□□ -1.34
HMGN1P20-201ENST00000411849 GSTCDQ8NEC7 633 aa6.67□□□□□ -1.34
HMGN1P20-201ENST00000411849 LNX1Q8TBB1 728 aaPredicted RBP6.67□□□□□ -1.34
HMGN1P20-201ENST00000411849 TBCKQ8TEA7 893 aa6.67□□□□□ -1.34
HMGN1P20-201ENST00000411849 ING5Q8WYH8 240 aa6.67□□□□□ -1.34
HMGN1P20-201ENST00000411849 IRF7Q92985 503 aa6.67□□□□□ -1.34
HMGN1P20-201ENST00000411849 GJA10Q969M2 543 aa6.67□□□□□ -1.34
HMGN1P20-201ENST00000411849 TMEM143Q96AN5 459 aa6.67□□□□□ -1.34
HMGN1P20-201ENST00000411849 MCRS1Q96EZ8 462 aa6.67□□□□□ -1.34
HMGN1P20-201ENST00000411849 TCEANC2Q96MN5 208 aa6.67□□□□□ -1.34
HMGN1P20-201ENST00000411849 TRMT61BQ9BVS5 477 aaKnown RBP6.67□□□□□ -1.34
HMGN1P20-201ENST00000411849 SLKQ9H2G2 1235 aaPredicted RBP6.67□□□□□ -1.34
HMGN1P20-201ENST00000411849 NXF3Q9H4D5 531 aaKnown RBP6.67□□□□□ -1.34
HMGN1P20-201ENST00000411849 ANO2Q9NQ90 1003 aa6.67□□□□□ -1.34
HMGN1P20-201ENST00000411849 TRPV5Q9NQA5 729 aa6.67□□□□□ -1.34
HMGN1P20-201ENST00000411849 AVENQ9NQS1 362 aaPredicted RBP6.67□□□□□ -1.34
HMGN1P20-201ENST00000411849 SH3GLB2Q9NR46 395 aa6.67□□□□□ -1.34
HMGN1P20-201ENST00000411849 HCFC1R1Q9NWW0 138 aa6.67□□□□□ -1.34
HMGN1P20-201ENST00000411849 MIOSQ9NXC5 875 aa6.67□□□□□ -1.34
HMGN1P20-201ENST00000411849 DNMT3BQ9UBC3 853 aaKnown RBP6.67□□□□□ -1.34
HMGN1P20-201ENST00000411849 ZNF638Q14966 1978 aaKnown RBP6.67□□□□□ -1.34
HMGN1P20-201ENST00000411849 TK2O00142 265 aa6.66□□□□□ -1.34
HMGN1P20-201ENST00000411849 GDF9O60383 454 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms