RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 PRSS33Q8NF86 280 aa24.52■■□□□ 1.52
MSH6-202ENST00000411819 PLIN2Q99541 437 aa24.52■■□□□ 1.52
MSH6-202ENST00000411819 MRPL4Q9BYD3 311 aaKnown RBP24.52■■□□□ 1.52
MSH6-202ENST00000411819 CLUHO75153 1309 aa24.52■■□□□ 1.52
MSH6-202ENST00000411819 VWA8A3KMH1 1905 aa24.51■■□□□ 1.51
MSH6-202ENST00000411819 GBP2P32456 591 aaPredicted RBP24.51■■□□□ 1.51
MSH6-202ENST00000411819 YARSP54577 528 aaKnown RBP24.51■■□□□ 1.51
MSH6-202ENST00000411819 OSTNP61366 133 aa24.51■■□□□ 1.51
MSH6-202ENST00000411819 ELAVL2Q12926 359 aaKnown RBP24.51■■□□□ 1.51
MSH6-202ENST00000411819 MAPK7Q13164 816 aa24.51■■□□□ 1.51
MSH6-202ENST00000411819 PSMD5Q16401 504 aa24.51■■□□□ 1.51
MSH6-202ENST00000411819 C1orf186Q6ZWK4 172 aa24.51■■□□□ 1.51
MSH6-202ENST00000411819 ALYREFQ86V81 257 aaKnown RBP24.51■■□□□ 1.51
MSH6-202ENST00000411819 HDAC7Q8WUI4 952 aa24.51■■□□□ 1.51
MSH6-202ENST00000411819 STAMQ92783 540 aa24.51■■□□□ 1.51
MSH6-202ENST00000411819 ACO2Q99798 780 aaKnown RBP24.51■■□□□ 1.51
MSH6-202ENST00000411819 CCDC94Q9BW85 323 aaPredicted RBP24.51■■□□□ 1.51
MSH6-202ENST00000411819 NT5C3AQ9H0P0 336 aa24.51■■□□□ 1.51
MSH6-202ENST00000411819 CDT1Q9H211 546 aa24.51■■□□□ 1.51
MSH6-202ENST00000411819 TMEM134Q9H6X4 195 aa24.51■■□□□ 1.51
MSH6-202ENST00000411819 ARHGAP28Q9P2N2 729 aa24.51■■□□□ 1.51
MSH6-202ENST00000411819 SFI1A8K8P3 1242 aa24.5■■□□□ 1.51
MSH6-202ENST00000411819 SLC16A4O15374 487 aa24.5■■□□□ 1.51
MSH6-202ENST00000411819 HARSP12081 509 aaKnown RBP24.5■■□□□ 1.51
MSH6-202ENST00000411819 CYP26C1Q6V0L0 522 aa24.5■■□□□ 1.51
MSH6-202ENST00000411819 PIK3R5Q8WYR1 880 aa24.5■■□□□ 1.51
MSH6-202ENST00000411819 PRRX2Q99811 253 aa24.5■■□□□ 1.51
MSH6-202ENST00000411819 TIPINQ9BVW5 301 aa24.5■■□□□ 1.51
MSH6-202ENST00000411819 TARS2Q9BW92 718 aaKnown RBP24.5■■□□□ 1.51
MSH6-202ENST00000411819 WDR6Q9NNW5 1121 aaKnown RBP24.5■■□□□ 1.51
MSH6-202ENST00000411819 TOPORSQ9NS56 1045 aaPredicted RBP24.5■■□□□ 1.51
MSH6-202ENST00000411819 DAXXQ9UER7 740 aaPredicted RBP24.5■■□□□ 1.51
MSH6-202ENST00000411819 RBM19Q9Y4C8 960 aaKnown RBP24.5■■□□□ 1.51
MSH6-202ENST00000411819 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.5■■□□□ 1.51
MSH6-202ENST00000411819 CITO14578 2027 aa24.49■■□□□ 1.51
MSH6-202ENST00000411819 B3GAT3O94766 335 aa24.49■■□□□ 1.51
MSH6-202ENST00000411819 GRM5P41594 1212 aa24.49■■□□□ 1.51
MSH6-202ENST00000411819 PTPN5P54829 565 aa24.49■■□□□ 1.51
MSH6-202ENST00000411819 TAS1R3Q7RTX0 852 aa24.49■■□□□ 1.51
MSH6-202ENST00000411819 ZNF707Q96C28 371 aaPredicted RBP24.49■■□□□ 1.51
MSH6-202ENST00000411819 TBC1D32Q96NH3 1257 aa24.49■■□□□ 1.51
MSH6-202ENST00000411819 PNMA5Q96PV4 448 aa24.49■■□□□ 1.51
MSH6-202ENST00000411819 PPP1R10Q96QC0 940 aaKnown RBP24.49■■□□□ 1.51
MSH6-202ENST00000411819 TCHPQ9BT92 498 aa24.49■■□□□ 1.51
MSH6-202ENST00000411819 C17orf75Q9HAS0 396 aa24.49■■□□□ 1.51
MSH6-202ENST00000411819 GOLGA2P5Q9HBQ8 144 aa24.49■■□□□ 1.51
MSH6-202ENST00000411819 ZDHHC7Q9NXF8 308 aa24.49■■□□□ 1.51
MSH6-202ENST00000411819 WDFY4Q6ZS81 3184 aa24.49■■□□□ 1.51
MSH6-202ENST00000411819 C1RP00736 705 aa24.48■■□□□ 1.51
MSH6-202ENST00000411819 GUCY2CP25092 1073 aa24.48■■□□□ 1.51
MSH6-202ENST00000411819 AVPR2P30518 371 aa24.48■■□□□ 1.51
MSH6-202ENST00000411819 HYIQ5T013 277 aa24.48■■□□□ 1.51
MSH6-202ENST00000411819 LIN9Q5TKA1 542 aa24.48■■□□□ 1.51
MSH6-202ENST00000411819 LARP1BQ659C4 914 aaKnown RBP24.48■■□□□ 1.51
MSH6-202ENST00000411819 ARL6IP4Q66PJ3 421 aaKnown RBP24.48■■□□□ 1.51
MSH6-202ENST00000411819 LILRA6Q6PI73 481 aa24.48■■□□□ 1.51
MSH6-202ENST00000411819 LNX1Q8TBB1 728 aaPredicted RBP24.48■■□□□ 1.51
MSH6-202ENST00000411819 RHOBTB2Q9BYZ6 727 aa24.48■■□□□ 1.51
MSH6-202ENST00000411819 MFSD1Q9H3U5 465 aa24.48■■□□□ 1.51
MSH6-202ENST00000411819 N4BP1O75113 896 aaKnown RBP24.47■■□□□ 1.51
MSH6-202ENST00000411819 CLCNKBP51801 687 aa24.47■■□□□ 1.51
MSH6-202ENST00000411819 STRN3Q13033 797 aa24.47■■□□□ 1.51
MSH6-202ENST00000411819 PDXDC1Q6P996 788 aa24.47■■□□□ 1.51
MSH6-202ENST00000411819 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.47■■□□□ 1.51
MSH6-202ENST00000411819 UROC1Q96N76 676 aa24.47■■□□□ 1.51
MSH6-202ENST00000411819 CLSTN3Q9BQT9 956 aa24.47■■□□□ 1.51
MSH6-202ENST00000411819 PRKD2Q9BZL6 878 aa24.47■■□□□ 1.51
MSH6-202ENST00000411819 KCNK12Q9HB15 430 aa24.47■■□□□ 1.51
MSH6-202ENST00000411819 ANKFY1Q9P2R3 1169 aa24.47■■□□□ 1.51
MSH6-202ENST00000411819 FBXW11Q9UKB1 542 aa24.47■■□□□ 1.51
MSH6-202ENST00000411819 SMIM28A0A1B0GU29 152 aa24.46■■□□□ 1.51
MSH6-202ENST00000411819 TMEM189-UBE2V1I3L0A0 370 aa24.46■■□□□ 1.51
MSH6-202ENST00000411819 ZMYND10O75800 440 aa24.46■■□□□ 1.51
MSH6-202ENST00000411819 PLA2G4BP0C869 781 aa24.46■■□□□ 1.51
MSH6-202ENST00000411819 MCF2P10911 925 aa24.46■■□□□ 1.51
MSH6-202ENST00000411819 PLS3P13797 630 aa24.46■■□□□ 1.51
MSH6-202ENST00000411819 SMTNP53814 917 aa24.46■■□□□ 1.51
MSH6-202ENST00000411819 CACNB1Q02641 598 aaPredicted RBP24.46■■□□□ 1.51
MSH6-202ENST00000411819 TDGQ13569 410 aa24.46■■□□□ 1.51
MSH6-202ENST00000411819 MPZL3Q6UWV2 235 aa24.46■■□□□ 1.51
MSH6-202ENST00000411819 GET4Q7L5D6 327 aaPredicted RBP24.46■■□□□ 1.51
MSH6-202ENST00000411819 KCTD17Q8N5Z5 321 aa24.46■■□□□ 1.51
MSH6-202ENST00000411819 SYT2Q8N9I0 419 aaPredicted RBP24.46■■□□□ 1.51
MSH6-202ENST00000411819 PTPRHQ9HD43 1115 aa24.46■■□□□ 1.51
MSH6-202ENST00000411819 PIEZO1Q92508 2521 aa24.46■■□□□ 1.51
MSH6-202ENST00000411819 DOCK8Q8NF50 2099 aa24.46■■□□□ 1.51
MSH6-202ENST00000411819 MRE11P49959 708 aa24.45■■□□□ 1.5
MSH6-202ENST00000411819 TMEM119Q4V9L6 283 aa24.45■■□□□ 1.5
MSH6-202ENST00000411819 DCLRE1AQ6PJP8 1040 aa24.45■■□□□ 1.5
MSH6-202ENST00000411819 SPIRE2Q8WWL2 714 aa24.45■■□□□ 1.5
MSH6-202ENST00000411819 SNX27Q96L92 541 aa24.45■■□□□ 1.5
MSH6-202ENST00000411819 ACAP3Q96P50 834 aa24.45■■□□□ 1.5
MSH6-202ENST00000411819 MYADMQ96S97 322 aa24.45■■□□□ 1.5
MSH6-202ENST00000411819 IGSF9Q9P2J2 1179 aa24.45■■□□□ 1.5
MSH6-202ENST00000411819 TRAPPC3O43617 180 aa24.44■■□□□ 1.5
MSH6-202ENST00000411819 C8AP07357 584 aa24.44■■□□□ 1.5
MSH6-202ENST00000411819 PROZP22891 400 aa24.44■■□□□ 1.5
MSH6-202ENST00000411819 IGFBP6P24592 240 aaPredicted RBP24.44■■□□□ 1.5
MSH6-202ENST00000411819 SLC12A3P55017 1021 aa24.44■■□□□ 1.5
MSH6-202ENST00000411819 SOX4Q06945 474 aaPredicted RBP24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms