RNA–Protein interactions for RNA: ENST00000410007.5

PBRM1-208, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-208ENST00000410007 NT5C1AQ9BXI3 368 aa9.62□□□□□ -0.87
PBRM1-208ENST00000410007 PLEKHA5Q9HAU0 1116 aa9.62□□□□□ -0.87
PBRM1-208ENST00000410007 GBA2Q9HCG7 927 aaPredicted RBP9.62□□□□□ -0.87
PBRM1-208ENST00000410007 LSM7Q9UK45 103 aaKnown RBP9.62□□□□□ -0.87
PBRM1-208ENST00000410007 TTC7AQ9ULT0 858 aaPredicted RBP9.62□□□□□ -0.87
PBRM1-208ENST00000410007 STK25O00506 426 aa9.62□□□□□ -0.87
PBRM1-208ENST00000410007 HSPA4LO95757 839 aa9.62□□□□□ -0.87
PBRM1-208ENST00000410007 MX2P20592 715 aa9.62□□□□□ -0.87
PBRM1-208ENST00000410007 NPEPPSP55786 919 aa9.62□□□□□ -0.87
PBRM1-208ENST00000410007 FMR1Q06787 632 aaKnown RBP eCLIP9.62□□□□□ -0.87
PBRM1-208ENST00000410007 TXNRD3Q86VQ6 643 aa9.62□□□□□ -0.87
PBRM1-208ENST00000410007 CRLF3Q8IUI8 442 aa9.62□□□□□ -0.87
PBRM1-208ENST00000410007 WDR75Q8IWA0 830 aaKnown RBP9.62□□□□□ -0.87
PBRM1-208ENST00000410007 CNPY4Q8N129 248 aa9.62□□□□□ -0.87
PBRM1-208ENST00000410007 KCNB2Q92953 911 aa9.62□□□□□ -0.87
PBRM1-208ENST00000410007 EFHD1Q9BUP0 239 aa9.62□□□□□ -0.87
PBRM1-208ENST00000410007 DDX47Q9H0S4 455 aaKnown RBP9.62□□□□□ -0.87
PBRM1-208ENST00000410007 FAM96AQ9H5X1 160 aa9.62□□□□□ -0.87
PBRM1-208ENST00000410007 PCDHB2Q9Y5E7 798 aa9.62□□□□□ -0.87
PBRM1-208ENST00000410007 COL5A2P05997 1499 aaPredicted RBP9.62□□□□□ -0.87
PBRM1-208ENST00000410007 HLA-DRAP01903 254 aa9.61□□□□□ -0.87
PBRM1-208ENST00000410007 SKIP12755 728 aa9.61□□□□□ -0.87
PBRM1-208ENST00000410007 PDGFRAP16234 1089 aa9.61□□□□□ -0.87
PBRM1-208ENST00000410007 ACADSBP45954 432 aa9.61□□□□□ -0.87
PBRM1-208ENST00000410007 CLNS1AP54105 237 aaKnown RBP9.61□□□□□ -0.87
PBRM1-208ENST00000410007 TPI1P60174 286 aa9.61□□□□□ -0.87
PBRM1-208ENST00000410007 SNX17Q15036 470 aa9.61□□□□□ -0.87
PBRM1-208ENST00000410007 ZC2HC1CQ53FD0 456 aaPredicted RBP9.61□□□□□ -0.87
PBRM1-208ENST00000410007 CCDC137Q6PK04 289 aaKnown RBP9.61□□□□□ -0.87
PBRM1-208ENST00000410007 TTC8Q8TAM2 541 aa9.61□□□□□ -0.87
PBRM1-208ENST00000410007 TACO1Q9BSH4 297 aaKnown RBP9.61□□□□□ -0.87
PBRM1-208ENST00000410007 TXLNGQ9NUQ3 528 aa9.61□□□□□ -0.87
PBRM1-208ENST00000410007 POLR1AO95602 1720 aaPredicted RBP9.61□□□□□ -0.87
PBRM1-208ENST00000410007 NWD1Q149M9 1564 aa9.61□□□□□ -0.87
PBRM1-208ENST00000410007 NEURL4Q96JN8 1562 aa9.61□□□□□ -0.87
PBRM1-208ENST00000410007 A0A087WUV0 522 aaPredicted RBP9.61□□□□□ -0.87
PBRM1-208ENST00000410007 RASA4BC9J798 803 aa9.61□□□□□ -0.87
PBRM1-208ENST00000410007 RASA4O43374 803 aa9.61□□□□□ -0.87
PBRM1-208ENST00000410007 NCK2O43639 380 aa9.61□□□□□ -0.87
PBRM1-208ENST00000410007 SLC8A1P32418 973 aa9.61□□□□□ -0.87
PBRM1-208ENST00000410007 SREBF1P36956 1147 aa9.61□□□□□ -0.87
PBRM1-208ENST00000410007 PNPLA4P41247 253 aa9.61□□□□□ -0.87
PBRM1-208ENST00000410007 PRAMEP78395 509 aa9.61□□□□□ -0.87
PBRM1-208ENST00000410007 TMEM62Q0P6H9 643 aa9.61□□□□□ -0.87
PBRM1-208ENST00000410007 ZNF484Q5JVG2 852 aa9.61□□□□□ -0.87
PBRM1-208ENST00000410007 ATP11CQ8NB49 1132 aa9.61□□□□□ -0.87
PBRM1-208ENST00000410007 MMTAG2Q9BU76 263 aaKnown RBP9.61□□□□□ -0.87
PBRM1-208ENST00000410007 NIF3L1Q9GZT8 377 aa9.61□□□□□ -0.87
PBRM1-208ENST00000410007 IL25Q9H293 177 aa9.61□□□□□ -0.87
PBRM1-208ENST00000410007 IRAK4Q9NWZ3 460 aa9.61□□□□□ -0.87
PBRM1-208ENST00000410007 TMEM131LA2VDJ0 1609 aa9.61□□□□□ -0.87
PBRM1-208ENST00000410007 WDR91A4D1P6 747 aa9.61□□□□□ -0.87
PBRM1-208ENST00000410007 AP3B1O00203 1094 aa9.61□□□□□ -0.87
PBRM1-208ENST00000410007 SNX2O60749 519 aa9.61□□□□□ -0.87
PBRM1-208ENST00000410007 RPLP2P05387 115 aaKnown RBP9.61□□□□□ -0.87
PBRM1-208ENST00000410007 NOP14P78316 857 aaKnown RBP9.61□□□□□ -0.87
PBRM1-208ENST00000410007 ACCSLQ4AC99 568 aa9.61□□□□□ -0.87
PBRM1-208ENST00000410007 TTC23LQ6PF05 361 aa9.61□□□□□ -0.87
PBRM1-208ENST00000410007 TRAPPC11Q7Z392 1133 aa9.61□□□□□ -0.87
PBRM1-208ENST00000410007 RCOR2Q8IZ40 523 aa9.61□□□□□ -0.87
PBRM1-208ENST00000410007 EXOC4Q96A65 974 aa9.61□□□□□ -0.87
PBRM1-208ENST00000410007 SNF8Q96H20 258 aa9.61□□□□□ -0.87
PBRM1-208ENST00000410007 SENP7Q9BQF6 1050 aa9.61□□□□□ -0.87
PBRM1-208ENST00000410007 MOSPD1Q9UJG1 213 aa9.61□□□□□ -0.87
PBRM1-208ENST00000410007 C17orf102A2RUQ5 167 aa9.61□□□□□ -0.87
PBRM1-208ENST00000410007 FOXP2O15409 715 aa9.61□□□□□ -0.87
PBRM1-208ENST00000410007 VEGFAP15692 232 aaPredicted RBP9.61□□□□□ -0.87
PBRM1-208ENST00000410007 SULT1E1P49888 294 aa9.61□□□□□ -0.87
PBRM1-208ENST00000410007 TMPRSS15P98073 1019 aa9.61□□□□□ -0.87
PBRM1-208ENST00000410007 DCAF4L1Q3SXM0 396 aa9.61□□□□□ -0.87
PBRM1-208ENST00000410007 PID1Q7Z2X4 250 aa9.61□□□□□ -0.87
PBRM1-208ENST00000410007 YAF2Q8IY57 180 aa9.61□□□□□ -0.87
PBRM1-208ENST00000410007 EFHBQ8N7U6 833 aa9.61□□□□□ -0.87
PBRM1-208ENST00000410007 EXT2Q93063 718 aa9.61□□□□□ -0.87
PBRM1-208ENST00000410007 RNPC3Q96LT9 517 aaKnown RBP9.61□□□□□ -0.87
PBRM1-208ENST00000410007 TARS2Q9BW92 718 aaKnown RBP9.61□□□□□ -0.87
PBRM1-208ENST00000410007 UNC45AQ9H3U1 944 aa9.61□□□□□ -0.87
PBRM1-208ENST00000410007 PMS2P54278 862 aa9.6□□□□□ -0.87
PBRM1-208ENST00000410007 NLRP11P59045 1033 aaKnown RBP9.6□□□□□ -0.87
PBRM1-208ENST00000410007 OCRLQ01968 901 aa9.6□□□□□ -0.87
PBRM1-208ENST00000410007 PIGHQ14442 188 aaPredicted RBP9.6□□□□□ -0.87
PBRM1-208ENST00000410007 ZNF677Q86XU0 584 aa9.6□□□□□ -0.87
PBRM1-208ENST00000410007 KLHL29Q96CT2 875 aa9.6□□□□□ -0.87
PBRM1-208ENST00000410007 ZBTB18Q99592 522 aa9.6□□□□□ -0.87
PBRM1-208ENST00000410007 SUN2Q9UH99 717 aa9.6□□□□□ -0.87
PBRM1-208ENST00000410007 DDTLA6NHG4 134 aaPredicted RBP9.6□□□□□ -0.87
PBRM1-208ENST00000410007 GOLGA8MH3BSY2 632 aa9.6□□□□□ -0.87
PBRM1-208ENST00000410007 CTIFO43310 598 aaKnown RBP9.6□□□□□ -0.87
PBRM1-208ENST00000410007 ALDH1A1P00352 501 aa9.6□□□□□ -0.87
PBRM1-208ENST00000410007 GALCP54803 685 aa9.6□□□□□ -0.87
PBRM1-208ENST00000410007 YWHAHQ04917 246 aaPredicted RBP9.6□□□□□ -0.87
PBRM1-208ENST00000410007 NBPF9Q3BBW0 867 aa9.6□□□□□ -0.87
PBRM1-208ENST00000410007 DPF2Q92785 391 aa9.6□□□□□ -0.87
PBRM1-208ENST00000410007 TTC17Q96AE7 1141 aa9.6□□□□□ -0.87
PBRM1-208ENST00000410007 TAF1DQ9H5J8 278 aaPredicted RBP9.6□□□□□ -0.87
PBRM1-208ENST00000410007 ABCF3Q9NUQ8 709 aa9.6□□□□□ -0.87
PBRM1-208ENST00000410007 VCAM1P19320 739 aa9.6□□□□□ -0.87
PBRM1-208ENST00000410007 LIG3P49916 1009 aa9.6□□□□□ -0.87
PBRM1-208ENST00000410007 SLC26A2P50443 739 aa9.6□□□□□ -0.87
PBRM1-208ENST00000410007 MRPS25P82663 173 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms