RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 STAG3L1P0CL83 205 aa13.47□□□□□ -0.25
CHMP3-204ENST00000409727 MCF2P10911 925 aa13.47□□□□□ -0.25
CHMP3-204ENST00000409727 GTF2H1P32780 548 aa13.47□□□□□ -0.25
CHMP3-204ENST00000409727 PIK3CAP42336 1068 aa13.47□□□□□ -0.25
CHMP3-204ENST00000409727 CRYBB1P53674 252 aaPredicted RBP13.47□□□□□ -0.25
CHMP3-204ENST00000409727 SLC9C1Q4G0N8 1177 aa13.47□□□□□ -0.25
CHMP3-204ENST00000409727 TDRD12Q587J7 1177 aaKnown RBP13.47□□□□□ -0.25
CHMP3-204ENST00000409727 TDRD10Q5VZ19 366 aaKnown RBP13.47□□□□□ -0.25
CHMP3-204ENST00000409727 NME8Q8N427 588 aa13.47□□□□□ -0.25
CHMP3-204ENST00000409727 PPP1R13BQ96KQ4 1090 aa13.47□□□□□ -0.25
CHMP3-204ENST00000409727 C16orf45Q96MC5 204 aaPredicted RBP13.47□□□□□ -0.25
CHMP3-204ENST00000409727 GLT1D1Q96MS3 346 aa13.47□□□□□ -0.25
CHMP3-204ENST00000409727 CELF4Q9BZC1 486 aaKnown RBP13.47□□□□□ -0.25
CHMP3-204ENST00000409727 RPF1Q9H9Y2 349 aaKnown RBP13.47□□□□□ -0.25
CHMP3-204ENST00000409727 RAB20Q9NX57 234 aa13.47□□□□□ -0.25
CHMP3-204ENST00000409727 ARHGAP20Q9P2F6 1191 aa13.47□□□□□ -0.25
CHMP3-204ENST00000409727 PIN4Q9Y237 131 aaKnown RBP13.47□□□□□ -0.25
CHMP3-204ENST00000409727 NOD1Q9Y239 953 aa13.47□□□□□ -0.25
CHMP3-204ENST00000409727 PPP2R2CQ9Y2T4 447 aa13.47□□□□□ -0.25
CHMP3-204ENST00000409727 CDY2AQ9Y6F7 541 aa13.47□□□□□ -0.25
CHMP3-204ENST00000409727 PHACTR2O75167 634 aa13.46□□□□□ -0.25
CHMP3-204ENST00000409727 HOXA11P31270 313 aaPredicted RBP13.46□□□□□ -0.25
CHMP3-204ENST00000409727 THPOP40225 353 aa13.46□□□□□ -0.25
CHMP3-204ENST00000409727 CLDN10P78369 228 aa13.46□□□□□ -0.25
CHMP3-204ENST00000409727 MRPS6P82932 125 aaKnown RBP13.46□□□□□ -0.25
CHMP3-204ENST00000409727 TFAMQ00059 246 aaKnown RBP13.46□□□□□ -0.25
CHMP3-204ENST00000409727 DRAP1Q14919 205 aaPredicted RBP13.46□□□□□ -0.25
CHMP3-204ENST00000409727 MTFR1Q15390 333 aa13.46□□□□□ -0.25
CHMP3-204ENST00000409727 ASIC2Q16515 512 aa13.46□□□□□ -0.25
CHMP3-204ENST00000409727 DNTTIP2Q5QJE6 756 aaKnown RBP13.46□□□□□ -0.25
CHMP3-204ENST00000409727 RSPH3Q86UC2 560 aa13.46□□□□□ -0.25
CHMP3-204ENST00000409727 SERINC5Q86VE9 423 aa13.46□□□□□ -0.25
CHMP3-204ENST00000409727 PPM1KQ8N3J5 372 aa13.46□□□□□ -0.25
CHMP3-204ENST00000409727 KAT5Q92993 513 aa13.46□□□□□ -0.25
CHMP3-204ENST00000409727 EIF2AQ9BY44 585 aaKnown RBP13.46□□□□□ -0.25
CHMP3-204ENST00000409727 MTMR12Q9C0I1 747 aa13.46□□□□□ -0.25
CHMP3-204ENST00000409727 DEF6Q9H4E7 631 aa13.46□□□□□ -0.25
CHMP3-204ENST00000409727 SPTLC3Q9NUV7 552 aa13.46□□□□□ -0.25
CHMP3-204ENST00000409727 A0A0U1RQJ8 604 aa13.46□□□□□ -0.26
CHMP3-204ENST00000409727 A0A1W2PQ45 241 aaPredicted RBP13.46□□□□□ -0.26
CHMP3-204ENST00000409727 A0A1W2PQY0 241 aa13.46□□□□□ -0.26
CHMP3-204ENST00000409727 CABYRO75952 493 aa13.46□□□□□ -0.26
CHMP3-204ENST00000409727 GFPT2O94808 682 aa13.46□□□□□ -0.26
CHMP3-204ENST00000409727 C4BPAP04003 597 aaKnown RBP13.46□□□□□ -0.26
CHMP3-204ENST00000409727 HNRNPH3P31942 346 aaKnown RBP13.46□□□□□ -0.26
CHMP3-204ENST00000409727 EIF4A3P38919 411 aaKnown RBP13.46□□□□□ -0.26
CHMP3-204ENST00000409727 KCNJ6P48051 423 aa13.46□□□□□ -0.26
CHMP3-204ENST00000409727 MCCD1P59942 119 aaPredicted RBP13.46□□□□□ -0.26
CHMP3-204ENST00000409727 SCARA3Q6AZY7 606 aa13.46□□□□□ -0.26
CHMP3-204ENST00000409727 ATRIPQ8WXE1 791 aa13.46□□□□□ -0.26
CHMP3-204ENST00000409727 CCDC42Q96M95 316 aa13.46□□□□□ -0.26
CHMP3-204ENST00000409727 NUCKS1Q9H1E3 243 aaKnown RBP13.46□□□□□ -0.26
CHMP3-204ENST00000409727 HES2Q9Y543 173 aa13.46□□□□□ -0.26
CHMP3-204ENST00000409727 EPN1Q9Y6I3 576 aaPredicted RBP13.46□□□□□ -0.26
CHMP3-204ENST00000409727 MOXD2PA6NHM9 499 aa13.45□□□□□ -0.26
CHMP3-204ENST00000409727 F8VZ95 297 aa13.45□□□□□ -0.26
CHMP3-204ENST00000409727 ZSCAN12O43309 604 aa13.45□□□□□ -0.26
CHMP3-204ENST00000409727 NDUFA10O95299 355 aa13.45□□□□□ -0.26
CHMP3-204ENST00000409727 HLA-DRAP01903 254 aa13.45□□□□□ -0.26
CHMP3-204ENST00000409727 CCDC175P0C221 793 aa13.45□□□□□ -0.26
CHMP3-204ENST00000409727 JAM2P57087 298 aa13.45□□□□□ -0.26
CHMP3-204ENST00000409727 KLHL30Q0D2K2 578 aa13.45□□□□□ -0.26
CHMP3-204ENST00000409727 ZACNQ401N2 412 aa13.45□□□□□ -0.26
CHMP3-204ENST00000409727 NOTUMQ6P988 496 aa13.45□□□□□ -0.26
CHMP3-204ENST00000409727 C15orf39Q6ZRI6 1047 aa13.45□□□□□ -0.26
CHMP3-204ENST00000409727 SESTD1Q86VW0 696 aa13.45□□□□□ -0.26
CHMP3-204ENST00000409727 WDR49Q8IV35 697 aa13.45□□□□□ -0.26
CHMP3-204ENST00000409727 TMEM130Q8N3G9 435 aa13.45□□□□□ -0.26
CHMP3-204ENST00000409727 ARRDC4Q8NCT1 418 aa13.45□□□□□ -0.26
CHMP3-204ENST00000409727 TATDN2Q93075 761 aa13.45□□□□□ -0.26
CHMP3-204ENST00000409727 DEFB118Q96PH6 123 aa13.45□□□□□ -0.26
CHMP3-204ENST00000409727 APOL6Q9BWW8 343 aa13.45□□□□□ -0.26
CHMP3-204ENST00000409727 STK33Q9BYT3 514 aa13.45□□□□□ -0.26
CHMP3-204ENST00000409727 TRIM6Q9C030 488 aaPredicted RBP13.45□□□□□ -0.26
CHMP3-204ENST00000409727 STARD7Q9NQZ5 370 aa13.45□□□□□ -0.26
CHMP3-204ENST00000409727 FBXL5Q9UKA1 691 aa13.45□□□□□ -0.26
CHMP3-204ENST00000409727 COQ4Q9Y3A0 265 aa13.45□□□□□ -0.26
CHMP3-204ENST00000409727 NOC2LQ9Y3T9 749 aaKnown RBP13.45□□□□□ -0.26
CHMP3-204ENST00000409727 TRPV2Q9Y5S1 764 aa13.45□□□□□ -0.26
CHMP3-204ENST00000409727 ADGRG1Q9Y653 693 aa13.45□□□□□ -0.26
CHMP3-204ENST00000409727 CEP350Q5VT06 3117 aa13.45□□□□□ -0.26
CHMP3-204ENST00000409727 DNAH12Q6ZR08 3092 aa13.45□□□□□ -0.26
CHMP3-204ENST00000409727 LACTBL1A8MY62 500 aa13.44□□□□□ -0.26
CHMP3-204ENST00000409727 KBTBD13C9JR72 458 aa13.44□□□□□ -0.26
CHMP3-204ENST00000409727 PMM2O15305 246 aa13.44□□□□□ -0.26
CHMP3-204ENST00000409727 MEFVO15553 781 aaPredicted RBP13.44□□□□□ -0.26
CHMP3-204ENST00000409727 VNN1O95497 513 aa13.44□□□□□ -0.26
CHMP3-204ENST00000409727 CHRNA1P02708 482 aa13.44□□□□□ -0.26
CHMP3-204ENST00000409727 NFICP08651 508 aa13.44□□□□□ -0.26
CHMP3-204ENST00000409727 CLTAP09496 248 aa13.44□□□□□ -0.26
CHMP3-204ENST00000409727 USP8P40818 1118 aa13.44□□□□□ -0.26
CHMP3-204ENST00000409727 CYP27A1Q02318 531 aa13.44□□□□□ -0.26
CHMP3-204ENST00000409727 ENPEPQ07075 957 aa13.44□□□□□ -0.26
CHMP3-204ENST00000409727 NFX1Q12986 1120 aaKnown RBP13.44□□□□□ -0.26
CHMP3-204ENST00000409727 HGSNATQ68CP4 663 aa13.44□□□□□ -0.26
CHMP3-204ENST00000409727 SPOPLQ6IQ16 392 aa13.44□□□□□ -0.26
CHMP3-204ENST00000409727 SLC27A1Q6PCB7 646 aa13.44□□□□□ -0.26
CHMP3-204ENST00000409727 EFCAB13Q8IY85 973 aa13.44□□□□□ -0.26
CHMP3-204ENST00000409727 SYN2Q92777 582 aaPredicted RBP13.44□□□□□ -0.26
CHMP3-204ENST00000409727 NT5C1BQ96P26 610 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms