RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 PTPN22Q9Y2R2 807 aa6.21□□□□□ -1.42
R3HDM1-202ENST00000409478 ADAMTSL3P82987 1691 aa6.21□□□□□ -1.42
R3HDM1-202ENST00000409478 ANKRD36CQ5JPF3 1778 aa6.21□□□□□ -1.42
R3HDM1-202ENST00000409478 GTPBP10A4D1E9 387 aaKnown RBP6.21□□□□□ -1.42
R3HDM1-202ENST00000409478 ANKRD63C9JTQ0 380 aa6.21□□□□□ -1.42
R3HDM1-202ENST00000409478 NDC80O14777 642 aa6.21□□□□□ -1.42
R3HDM1-202ENST00000409478 ABHD2P08910 425 aa6.21□□□□□ -1.42
R3HDM1-202ENST00000409478 CETN2P41208 172 aa6.21□□□□□ -1.42
R3HDM1-202ENST00000409478 SERPINB8P50452 374 aa6.21□□□□□ -1.42
R3HDM1-202ENST00000409478 MED21Q13503 144 aa6.21□□□□□ -1.42
R3HDM1-202ENST00000409478 CTTNQ14247 550 aaKnown RBP6.21□□□□□ -1.42
R3HDM1-202ENST00000409478 ADRM1Q16186 407 aa6.21□□□□□ -1.42
R3HDM1-202ENST00000409478 TRMT5Q32P41 509 aaKnown RBP6.21□□□□□ -1.42
R3HDM1-202ENST00000409478 TMEM119Q4V9L6 283 aa6.21□□□□□ -1.42
R3HDM1-202ENST00000409478 KIF6Q6ZMV9 814 aa6.21□□□□□ -1.42
R3HDM1-202ENST00000409478 CYP4X1Q8N118 509 aa6.21□□□□□ -1.42
R3HDM1-202ENST00000409478 BBOF1Q8ND07 529 aa6.21□□□□□ -1.42
R3HDM1-202ENST00000409478 DENND1AQ8TEH3 1009 aa6.21□□□□□ -1.42
R3HDM1-202ENST00000409478 DIS3LQ8TF46 1054 aaKnown RBP6.21□□□□□ -1.42
R3HDM1-202ENST00000409478 C17orf50Q8WW18 174 aa6.21□□□□□ -1.42
R3HDM1-202ENST00000409478 AGBL1Q96MI9 1066 aa6.21□□□□□ -1.42
R3HDM1-202ENST00000409478 YIPF2Q9BWQ6 316 aa6.21□□□□□ -1.42
R3HDM1-202ENST00000409478 OSBPL8Q9BZF1 889 aa6.21□□□□□ -1.42
R3HDM1-202ENST00000409478 WNT8AQ9H1J5 351 aa6.21□□□□□ -1.42
R3HDM1-202ENST00000409478 KCTD10Q9H3F6 313 aa6.21□□□□□ -1.42
R3HDM1-202ENST00000409478 LRRC19Q9H756 370 aa6.21□□□□□ -1.42
R3HDM1-202ENST00000409478 GPAMQ9HCL2 828 aa6.21□□□□□ -1.42
R3HDM1-202ENST00000409478 C6orf50Q9HD87 102 aa6.21□□□□□ -1.42
R3HDM1-202ENST00000409478 DDX25Q9UHL0 483 aaKnown RBP6.21□□□□□ -1.42
R3HDM1-202ENST00000409478 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.21□□□□□ -1.42
R3HDM1-202ENST00000409478 ALG6Q9Y672 507 aa6.21□□□□□ -1.42
R3HDM1-202ENST00000409478 A6NJR5 290 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 ABCB4P21439 1286 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 NR2F2P24468 414 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 TXKP42681 527 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 ASPHQ12797 758 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 DCTN2Q13561 401 aaKnown RBP6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 TTLL12Q14166 644 aaPredicted RBP6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 TCEAL1Q15170 157 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 TMED2Q15363 201 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 EPHA7Q15375 998 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 CALCRLQ16602 461 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 P3H1Q32P28 736 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 SLC44A4Q53GD3 710 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 MAP3K21Q5TCX8 1036 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 KRT28Q7Z3Y7 464 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 RELL1Q8IUW5 271 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 GLIS3Q8NEA6 775 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 SNX29Q8TEQ0 813 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 GRK7Q8WTQ7 553 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 SLC35B4Q969S0 331 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 MXD3Q9BW11 206 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 TRAIPQ9BWF2 469 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 PLVAPQ9BX97 442 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 SLCO1B3Q9NPD5 702 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 EURLQ9NYK6 297 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 NINJ2Q9NZG7 142 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 BTBD7Q9P203 1132 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 WNK3Q9BYP7 1800 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 COL1A1P02452 1464 aaPredicted RBP6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 hCG_2014768A0A024R1R8 64 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 MAFGO15525 162 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 ESRRAP11474 423 aaPredicted RBP6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 SOX5P35711 763 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 CDC16Q13042 620 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 GRM4Q14833 912 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 DDB1Q16531 1140 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 NCCRP1Q6ZVX7 275 aaPredicted RBP6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 CCDC80Q76M96 950 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 OTOAQ7RTW8 1153 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 TRABD2AQ86V40 505 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 SLC13A5Q86YT5 568 aaPredicted RBP6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 SYT2Q8N9I0 419 aaPredicted RBP6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 CCDC110Q8TBZ0 833 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 ABTB1Q969K4 478 aaPredicted RBP6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 DNAJC19Q96DA6 116 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 POLR3CQ9BUI4 534 aaPredicted RBP6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 PPCSQ9HAB8 311 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 EMILIN3Q9NT22 766 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 ASIC3Q9UHC3 531 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 AXIN2Q9Y2T1 843 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 LRP5O75197 1615 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 CFAP69A5D8W1 941 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 SORBS3O60504 671 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 FKBP6O75344 327 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 BCRP11274 1271 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 ZNF24P17028 368 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 CHKAP35790 457 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 PGM1P36871 562 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 CLCN2P51788 898 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 GPSM2P81274 684 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 KRT17Q04695 432 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 PPP2R5CQ13362 524 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 KBTBD12Q3ZCT8 623 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 RBM26Q5T8P6 1007 aaKnown RBP6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 RNF207Q6ZRF8 634 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 ADGRG6Q86SQ4 1221 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 TDRPQ86YL5 185 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 PASD1Q8IV76 773 aa6.2□□□□□ -1.42
R3HDM1-202ENST00000409478 GLYCTKQ8IVS8 523 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms