RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 ENOX2Q16206 610 aaKnown RBP15.21■□□□□ 0.03
GPNMB-203ENST00000409458 KCNA10Q16322 511 aa15.21■□□□□ 0.03
GPNMB-203ENST00000409458 CCSAPQ6IQ19 270 aaPredicted RBP15.21■□□□□ 0.03
GPNMB-203ENST00000409458 IRF2BP2Q7Z5L9 587 aa15.21■□□□□ 0.03
GPNMB-203ENST00000409458 TMEM192Q8IY95 271 aa15.21■□□□□ 0.03
GPNMB-203ENST00000409458 ELMO3Q96BJ8 720 aa15.21■□□□□ 0.03
GPNMB-203ENST00000409458 DEF6Q9H4E7 631 aa15.21■□□□□ 0.03
GPNMB-203ENST00000409458 RAB20Q9NX57 234 aa15.21■□□□□ 0.03
GPNMB-203ENST00000409458 GTF2IRD1Q9UHL9 959 aa15.21■□□□□ 0.03
GPNMB-203ENST00000409458 RBAK-RBAKDNI3L0D1 243 aa15.2■□□□□ 0.02
GPNMB-203ENST00000409458 GFPT2O94808 682 aa15.2■□□□□ 0.02
GPNMB-203ENST00000409458 VNN1O95497 513 aa15.2■□□□□ 0.02
GPNMB-203ENST00000409458 INHAP05111 366 aa15.2■□□□□ 0.02
GPNMB-203ENST00000409458 MCF2P10911 925 aa15.2■□□□□ 0.02
GPNMB-203ENST00000409458 SOX5P35711 763 aa15.2■□□□□ 0.02
GPNMB-203ENST00000409458 STAT1P42224 750 aa15.2■□□□□ 0.02
GPNMB-203ENST00000409458 CDC42EP1Q00587 391 aa15.2■□□□□ 0.02
GPNMB-203ENST00000409458 ARHGAP44Q17R89 818 aa15.2■□□□□ 0.02
GPNMB-203ENST00000409458 GDF6Q6KF10 455 aaPredicted RBP15.2■□□□□ 0.02
GPNMB-203ENST00000409458 OR5B17Q8NGF7 314 aa15.2■□□□□ 0.02
GPNMB-203ENST00000409458 KAT5Q92993 513 aa15.2■□□□□ 0.02
GPNMB-203ENST00000409458 HAUS4Q9H6D7 363 aa15.2■□□□□ 0.02
GPNMB-203ENST00000409458 UBE2TQ9NPD8 197 aaPredicted RBP15.2■□□□□ 0.02
GPNMB-203ENST00000409458 LZTFL1Q9NQ48 299 aa15.2■□□□□ 0.02
GPNMB-203ENST00000409458 TSKSQ9UJT2 592 aa15.2■□□□□ 0.02
GPNMB-203ENST00000409458 AKR1B10O60218 316 aa15.19■□□□□ 0.02
GPNMB-203ENST00000409458 LCA5LO95447 670 aa15.19■□□□□ 0.02
GPNMB-203ENST00000409458 ABL1P00519 1130 aa15.19■□□□□ 0.02
GPNMB-203ENST00000409458 CXCL8P10145 99 aa15.19■□□□□ 0.02
GPNMB-203ENST00000409458 DARSP14868 501 aaKnown RBP15.19■□□□□ 0.02
GPNMB-203ENST00000409458 PRKCIP41743 596 aa15.19■□□□□ 0.02
GPNMB-203ENST00000409458 ARHGAP25P42331 645 aa15.19■□□□□ 0.02
GPNMB-203ENST00000409458 PIK3CAP42336 1068 aa15.19■□□□□ 0.02
GPNMB-203ENST00000409458 CYP27A1Q02318 531 aa15.19■□□□□ 0.02
GPNMB-203ENST00000409458 GFPT1Q06210 699 aaPredicted RBP15.19■□□□□ 0.02
GPNMB-203ENST00000409458 WDR49Q8IV35 697 aa15.19■□□□□ 0.02
GPNMB-203ENST00000409458 SLAIN1Q8ND83 568 aa15.19■□□□□ 0.02
GPNMB-203ENST00000409458 HELQQ8TDG4 1101 aa15.19■□□□□ 0.02
GPNMB-203ENST00000409458 TMEM40Q8WWA1 233 aa15.19■□□□□ 0.02
GPNMB-203ENST00000409458 FAM212AQ96EL1 285 aa15.19■□□□□ 0.02
GPNMB-203ENST00000409458 PI4K2AQ9BTU6 479 aa15.19■□□□□ 0.02
GPNMB-203ENST00000409458 TFR2Q9UP52 801 aa15.19■□□□□ 0.02
GPNMB-203ENST00000409458 A0A1B0GUA9 196 aa15.19■□□□□ 0.02
GPNMB-203ENST00000409458 MEFVO15553 781 aaPredicted RBP15.19■□□□□ 0.02
GPNMB-203ENST00000409458 EVI5O60447 810 aa15.19■□□□□ 0.02
GPNMB-203ENST00000409458 HLA-DRAP01903 254 aa15.19■□□□□ 0.02
GPNMB-203ENST00000409458 FERP16591 822 aa15.19■□□□□ 0.02
GPNMB-203ENST00000409458 KRT83P78385 493 aa15.19■□□□□ 0.02
GPNMB-203ENST00000409458 PTK2Q05397 1052 aa15.19■□□□□ 0.02
GPNMB-203ENST00000409458 BIRC3Q13489 604 aa15.19■□□□□ 0.02
GPNMB-203ENST00000409458 ZNF571Q7Z3V5 609 aaPredicted RBP15.19■□□□□ 0.02
GPNMB-203ENST00000409458 PPM1KQ8N3J5 372 aa15.19■□□□□ 0.02
GPNMB-203ENST00000409458 KREMEN1Q96MU8 473 aa15.19■□□□□ 0.02
GPNMB-203ENST00000409458 NT5C1BQ96P26 610 aa15.19■□□□□ 0.02
GPNMB-203ENST00000409458 MTMR12Q9C0I1 747 aa15.19■□□□□ 0.02
GPNMB-203ENST00000409458 KIF2AO00139 706 aaPredicted RBP15.18■□□□□ 0.02
GPNMB-203ENST00000409458 IPO7O95373 1038 aaKnown RBP15.18■□□□□ 0.02
GPNMB-203ENST00000409458 STAG3L1P0CL83 205 aa15.18■□□□□ 0.02
GPNMB-203ENST00000409458 HOXA11P31270 313 aaPredicted RBP15.18■□□□□ 0.02
GPNMB-203ENST00000409458 SNX17Q15036 470 aa15.18■□□□□ 0.02
GPNMB-203ENST00000409458 SPA17Q15506 151 aa15.18■□□□□ 0.02
GPNMB-203ENST00000409458 FAM47CQ5HY64 1035 aa15.18■□□□□ 0.02
GPNMB-203ENST00000409458 SCARA3Q6AZY7 606 aa15.18■□□□□ 0.02
GPNMB-203ENST00000409458 TAF2Q6P1X5 1199 aa15.18■□□□□ 0.02
GPNMB-203ENST00000409458 SYT10Q6XYQ8 523 aa15.18■□□□□ 0.02
GPNMB-203ENST00000409458 CATSPER4Q7RTX7 472 aa15.18■□□□□ 0.02
GPNMB-203ENST00000409458 EFCAB13Q8IY85 973 aa15.18■□□□□ 0.02
GPNMB-203ENST00000409458 ZNF592Q92610 1267 aa15.18■□□□□ 0.02
GPNMB-203ENST00000409458 TATDN2Q93075 761 aa15.18■□□□□ 0.02
GPNMB-203ENST00000409458 WNT8BQ93098 351 aa15.18■□□□□ 0.02
GPNMB-203ENST00000409458 RPF1Q9H9Y2 349 aaKnown RBP15.18■□□□□ 0.02
GPNMB-203ENST00000409458 TRIM10Q9UDY6 481 aa15.18■□□□□ 0.02
GPNMB-203ENST00000409458 PTCH2Q9Y6C5 1203 aa15.18■□□□□ 0.02
GPNMB-203ENST00000409458 GRIN2DO15399 1336 aa15.18■□□□□ 0.02
GPNMB-203ENST00000409458 RALGAPA2Q2PPJ7 1873 aa15.18■□□□□ 0.02
GPNMB-203ENST00000409458 RCCD1A6NED2 376 aa15.17■□□□□ 0.02
GPNMB-203ENST00000409458 FOXN3O00409 490 aaPredicted RBP15.17■□□□□ 0.02
GPNMB-203ENST00000409458 FANCGO15287 622 aa15.17■□□□□ 0.02
GPNMB-203ENST00000409458 ZC3H11AO75152 810 aaKnown RBP eCLIP15.17■□□□□ 0.02
GPNMB-203ENST00000409458 CLTAP09496 248 aa15.17■□□□□ 0.02
GPNMB-203ENST00000409458 EIF4BP23588 611 aaKnown RBP15.17■□□□□ 0.02
GPNMB-203ENST00000409458 VAV2P52735 878 aa15.17■□□□□ 0.02
GPNMB-203ENST00000409458 PRMT2P55345 433 aa15.17■□□□□ 0.02
GPNMB-203ENST00000409458 ARHGEF6Q15052 776 aa15.17■□□□□ 0.02
GPNMB-203ENST00000409458 SURF1Q15526 300 aa15.17■□□□□ 0.02
GPNMB-203ENST00000409458 ARHGAP29Q52LW3 1261 aa15.17■□□□□ 0.02
GPNMB-203ENST00000409458 KIAA1328Q86T90 577 aa15.17■□□□□ 0.02
GPNMB-203ENST00000409458 SESTD1Q86VW0 696 aa15.17■□□□□ 0.02
GPNMB-203ENST00000409458 NME8Q8N427 588 aa15.17■□□□□ 0.02
GPNMB-203ENST00000409458 PCSK9Q8NBP7 692 aaKnown RBP15.17■□□□□ 0.02
GPNMB-203ENST00000409458 OLIG1Q8TAK6 271 aa15.17■□□□□ 0.02
GPNMB-203ENST00000409458 JAKMIP2Q96AA8 810 aa15.17■□□□□ 0.02
GPNMB-203ENST00000409458 IRX2Q9BZI1 471 aaPredicted RBP15.17■□□□□ 0.02
GPNMB-203ENST00000409458 PCDHA13Q9Y5I0 950 aa15.17■□□□□ 0.02
GPNMB-203ENST00000409458 BZW2Q9Y6E2 419 aaKnown RBP15.17■□□□□ 0.02
GPNMB-203ENST00000409458 B4GALT4O60513 344 aa15.16■□□□□ 0.02
GPNMB-203ENST00000409458 IL18RAPO95256 599 aa15.16■□□□□ 0.02
GPNMB-203ENST00000409458 NPTXRO95502 500 aa15.16■□□□□ 0.02
GPNMB-203ENST00000409458 GRK4P32298 578 aa15.16■□□□□ 0.02
GPNMB-203ENST00000409458 CRYBB1P53674 252 aaPredicted RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms