RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 PIGOQ8TEQ8 1089 aa16.51■□□□□ 0.23
LIMS2-205ENST00000409455 KRT35Q92764 455 aa16.51■□□□□ 0.23
LIMS2-205ENST00000409455 GLIS2Q9BZE0 524 aaPredicted RBP16.51■□□□□ 0.23
LIMS2-205ENST00000409455 DEFB129Q9H1M3 183 aa16.51■□□□□ 0.23
LIMS2-205ENST00000409455 LRMDAQ9H2I8 198 aa16.51■□□□□ 0.23
LIMS2-205ENST00000409455 NKIRAS1Q9NYS0 192 aa16.51■□□□□ 0.23
LIMS2-205ENST00000409455 CTTNBP2NLQ9P2B4 639 aa16.51■□□□□ 0.23
LIMS2-205ENST00000409455 SYNPO2Q9UMS6 1093 aa16.51■□□□□ 0.23
LIMS2-205ENST00000409455 DPPA5A6NC42 116 aa16.51■□□□□ 0.23
LIMS2-205ENST00000409455 ANKRD63C9JTQ0 380 aa16.51■□□□□ 0.23
LIMS2-205ENST00000409455 MED24O75448 989 aa16.51■□□□□ 0.23
LIMS2-205ENST00000409455 COILP38432 576 aaPredicted RBP16.51■□□□□ 0.23
LIMS2-205ENST00000409455 PAPOLAP51003 745 aaKnown RBP16.51■□□□□ 0.23
LIMS2-205ENST00000409455 MXRA7P84157 204 aa16.51■□□□□ 0.23
LIMS2-205ENST00000409455 MGAT5Q09328 741 aa16.51■□□□□ 0.23
LIMS2-205ENST00000409455 STRN3Q13033 797 aa16.51■□□□□ 0.23
LIMS2-205ENST00000409455 VSIG1Q86XK7 387 aa16.51■□□□□ 0.23
LIMS2-205ENST00000409455 ECHDC2Q86YB7 292 aa16.51■□□□□ 0.23
LIMS2-205ENST00000409455 AGGF1Q8N302 714 aaeCLIP16.51■□□□□ 0.23
LIMS2-205ENST00000409455 STK32AQ8WU08 396 aa16.51■□□□□ 0.23
LIMS2-205ENST00000409455 UTP4Q969X6 686 aaKnown RBP16.51■□□□□ 0.23
LIMS2-205ENST00000409455 REEP2Q9BRK0 252 aa16.51■□□□□ 0.23
LIMS2-205ENST00000409455 SYT11Q9BT88 431 aa16.51■□□□□ 0.23
LIMS2-205ENST00000409455 PSTPIP2Q9H939 334 aa16.51■□□□□ 0.23
LIMS2-205ENST00000409455 CYP39A1Q9NYL5 469 aa16.51■□□□□ 0.23
LIMS2-205ENST00000409455 TAS2R14Q9NYV8 317 aa16.51■□□□□ 0.23
LIMS2-205ENST00000409455 NKX1-2Q9UD57 310 aaPredicted RBP16.51■□□□□ 0.23
LIMS2-205ENST00000409455 TMEM110-MUSTN1A8MSY1 372 aa16.5■□□□□ 0.23
LIMS2-205ENST00000409455 CLIC2O15247 247 aa16.5■□□□□ 0.23
LIMS2-205ENST00000409455 AP1G2O75843 785 aa16.5■□□□□ 0.23
LIMS2-205ENST00000409455 ECEL1O95672 775 aa16.5■□□□□ 0.23
LIMS2-205ENST00000409455 CLK2P49760 499 aaKnown RBP16.5■□□□□ 0.23
LIMS2-205ENST00000409455 HADHBP55084 474 aaKnown RBP16.5■□□□□ 0.23
LIMS2-205ENST00000409455 ZYXQ15942 572 aaKnown RBP16.5■□□□□ 0.23
LIMS2-205ENST00000409455 PAPOLBQ9NRJ5 636 aaKnown RBP16.5■□□□□ 0.23
LIMS2-205ENST00000409455 GCNT3O95395 438 aa16.5■□□□□ 0.23
LIMS2-205ENST00000409455 ATP6V1C1P21283 382 aa16.5■□□□□ 0.23
LIMS2-205ENST00000409455 MARCKSL1P49006 195 aa16.5■□□□□ 0.23
LIMS2-205ENST00000409455 LMNB2Q03252 620 aa16.5■□□□□ 0.23
LIMS2-205ENST00000409455 CYP1B1Q16678 543 aa16.5■□□□□ 0.23
LIMS2-205ENST00000409455 NBPF20Q3BBV1 942 aa16.5■□□□□ 0.23
LIMS2-205ENST00000409455 GNPTABQ3T906 1256 aa16.5■□□□□ 0.23
LIMS2-205ENST00000409455 SYDE2Q5VT97 1194 aa16.5■□□□□ 0.23
LIMS2-205ENST00000409455 ANO7Q6IWH7 933 aa16.5■□□□□ 0.23
LIMS2-205ENST00000409455 CGB2Q6NT52 195 aa16.5■□□□□ 0.23
LIMS2-205ENST00000409455 PITPNM3Q9BZ71 974 aa16.5■□□□□ 0.23
LIMS2-205ENST00000409455 CTNNAL1Q9UBT7 734 aa16.5■□□□□ 0.23
LIMS2-205ENST00000409455 ASNSP08243 561 aa16.49■□□□□ 0.23
LIMS2-205ENST00000409455 PABPC4Q13310 644 aaKnown RBP eCLIP16.49■□□□□ 0.23
LIMS2-205ENST00000409455 BMT2Q1RMZ1 405 aa16.49■□□□□ 0.23
LIMS2-205ENST00000409455 TSNAXIP1Q2TAA8 658 aa16.49■□□□□ 0.23
LIMS2-205ENST00000409455 ZNF568Q3ZCX4 644 aa16.49■□□□□ 0.23
LIMS2-205ENST00000409455 CMPK2Q5EBM0 449 aa16.49■□□□□ 0.23
LIMS2-205ENST00000409455 PPP1R21Q6ZMI0 780 aa16.49■□□□□ 0.23
LIMS2-205ENST00000409455 FAM186BQ8IYM0 893 aa16.49■□□□□ 0.23
LIMS2-205ENST00000409455 ZDHHC14Q8IZN3 488 aa16.49■□□□□ 0.23
LIMS2-205ENST00000409455 ANKLE1Q8NAG6 615 aa16.49■□□□□ 0.23
LIMS2-205ENST00000409455 SLC17A8Q8NDX2 589 aa16.49■□□□□ 0.23
LIMS2-205ENST00000409455 DNM3Q9UQ16 869 aa16.49■□□□□ 0.23
LIMS2-205ENST00000409455 PEX11AO75192 247 aa16.49■□□□□ 0.23
LIMS2-205ENST00000409455 STAT3P40763 770 aa16.49■□□□□ 0.23
LIMS2-205ENST00000409455 MFN1Q8IWA4 741 aa16.49■□□□□ 0.23
LIMS2-205ENST00000409455 ERP27Q96DN0 273 aa16.49■□□□□ 0.23
LIMS2-205ENST00000409455 PRR12Q9ULL5 1215 aa16.49■□□□□ 0.23
LIMS2-205ENST00000409455 ZMYND8Q9ULU4 1186 aaPredicted RBP16.49■□□□□ 0.23
LIMS2-205ENST00000409455 ARFGEF1Q9Y6D6 1849 aa16.49■□□□□ 0.23
LIMS2-205ENST00000409455 USP17L15C9J2P7 530 aa16.48■□□□□ 0.23
LIMS2-205ENST00000409455 USP17L13C9JLJ4 530 aa16.48■□□□□ 0.23
LIMS2-205ENST00000409455 USP17L11C9JVI0 530 aa16.48■□□□□ 0.23
LIMS2-205ENST00000409455 USP17L18D6R9N7 530 aa16.48■□□□□ 0.23
LIMS2-205ENST00000409455 USP17L22D6RA61 530 aa16.48■□□□□ 0.23
LIMS2-205ENST00000409455 USP17L17D6RBQ6 530 aa16.48■□□□□ 0.23
LIMS2-205ENST00000409455 USP17L19D6RCP7 530 aa16.48■□□□□ 0.23
LIMS2-205ENST00000409455 USP17L20D6RJB6 530 aa16.48■□□□□ 0.23
LIMS2-205ENST00000409455 TBCAO75347 108 aaKnown RBP16.48■□□□□ 0.23
LIMS2-205ENST00000409455 PDHA1P08559 390 aa16.48■□□□□ 0.23
LIMS2-205ENST00000409455 TPBGLP0DKB5 382 aa16.48■□□□□ 0.23
LIMS2-205ENST00000409455 PSMC2P35998 433 aaKnown RBP16.48■□□□□ 0.23
LIMS2-205ENST00000409455 FMO5P49326 533 aa16.48■□□□□ 0.23
LIMS2-205ENST00000409455 RAB27AP51159 221 aa16.48■□□□□ 0.23
LIMS2-205ENST00000409455 POLGP54098 1239 aaPredicted RBP16.48■□□□□ 0.23
LIMS2-205ENST00000409455 USP17L24Q0WX57 530 aa16.48■□□□□ 0.23
LIMS2-205ENST00000409455 CTTNQ14247 550 aaKnown RBP16.48■□□□□ 0.23
LIMS2-205ENST00000409455 NBPF12Q5TAG4 269 aaPredicted RBP16.48■□□□□ 0.23
LIMS2-205ENST00000409455 USP17L6PQ6QN14 398 aa16.48■□□□□ 0.23
LIMS2-205ENST00000409455 PALB2Q86YC2 1186 aa16.48■□□□□ 0.23
LIMS2-205ENST00000409455 NUDCD1Q96RS6 583 aa16.48■□□□□ 0.23
LIMS2-205ENST00000409455 RPS6KC1Q96S38 1066 aa16.48■□□□□ 0.23
LIMS2-205ENST00000409455 AMNQ9BXJ7 453 aa16.48■□□□□ 0.23
LIMS2-205ENST00000409455 MYLK2Q9H1R3 596 aa16.48■□□□□ 0.23
LIMS2-205ENST00000409455 WHRNQ9P202 907 aa16.48■□□□□ 0.23
LIMS2-205ENST00000409455 FRMPD4Q14CM0 1322 aa16.48■□□□□ 0.23
LIMS2-205ENST00000409455 ADGRA3Q8IWK6 1321 aa16.48■□□□□ 0.23
LIMS2-205ENST00000409455 NPTXRO95502 500 aa16.48■□□□□ 0.23
LIMS2-205ENST00000409455 POTEJP0CG39 1038 aa16.48■□□□□ 0.23
LIMS2-205ENST00000409455 GNAT1P11488 350 aa16.48■□□□□ 0.23
LIMS2-205ENST00000409455 STAT2P52630 851 aa16.48■□□□□ 0.23
LIMS2-205ENST00000409455 ROR2Q01974 943 aaKnown RBP16.48■□□□□ 0.23
LIMS2-205ENST00000409455 MPP2Q14168 576 aa16.48■□□□□ 0.23
LIMS2-205ENST00000409455 USH1GQ495M9 461 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms