RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 FUT10Q6P4F1 479 aa8.6□□□□□ -1.03
LSM5-202ENST00000409292 RSPO2Q6UXX9 243 aaPredicted RBP8.6□□□□□ -1.03
LSM5-202ENST00000409292 ANO5Q75V66 913 aa8.6□□□□□ -1.03
LSM5-202ENST00000409292 APBB1IPQ7Z5R6 666 aaPredicted RBP8.6□□□□□ -1.03
LSM5-202ENST00000409292 NEK8Q86SG6 692 aa8.6□□□□□ -1.03
LSM5-202ENST00000409292 FERMT3Q86UX7 667 aa8.6□□□□□ -1.03
LSM5-202ENST00000409292 C4orf19Q8IY42 314 aa8.6□□□□□ -1.03
LSM5-202ENST00000409292 COLGALT2Q8IYK4 626 aa8.6□□□□□ -1.03
LSM5-202ENST00000409292 FBXL16Q8N461 479 aa8.6□□□□□ -1.03
LSM5-202ENST00000409292 PJA1Q8NG27 643 aa8.6□□□□□ -1.03
LSM5-202ENST00000409292 RSAD2Q8WXG1 361 aa8.6□□□□□ -1.03
LSM5-202ENST00000409292 TMEM143Q96AN5 459 aa8.6□□□□□ -1.03
LSM5-202ENST00000409292 MYADMQ96S97 322 aa8.6□□□□□ -1.03
LSM5-202ENST00000409292 GAD1Q99259 594 aa8.6□□□□□ -1.03
LSM5-202ENST00000409292 VN1R3Q9BXE9 311 aa8.6□□□□□ -1.03
LSM5-202ENST00000409292 OSBPL6Q9BZF3 934 aa8.6□□□□□ -1.03
LSM5-202ENST00000409292 CSRNP2Q9H175 543 aa8.6□□□□□ -1.03
LSM5-202ENST00000409292 DHX33Q9H6R0 707 aaKnown RBP8.6□□□□□ -1.03
LSM5-202ENST00000409292 BRMS1Q9HCU9 246 aa8.6□□□□□ -1.03
LSM5-202ENST00000409292 PARP2Q9UGN5 583 aa8.6□□□□□ -1.03
LSM5-202ENST00000409292 FBXO4Q9UKT5 387 aa8.6□□□□□ -1.03
LSM5-202ENST00000409292 CDH7Q9ULB5 785 aa8.6□□□□□ -1.03
LSM5-202ENST00000409292 POLIQ9UNA4 740 aa8.6□□□□□ -1.03
LSM5-202ENST00000409292 IPPQ9Y573 584 aa8.6□□□□□ -1.03
LSM5-202ENST00000409292 NID2Q14112 1375 aa8.6□□□□□ -1.03
LSM5-202ENST00000409292 KANSL1LA0AUZ9 987 aa8.59□□□□□ -1.03
LSM5-202ENST00000409292 TMEM150BA6NC51 233 aa8.59□□□□□ -1.03
LSM5-202ENST00000409292 TGM5O43548 720 aa8.59□□□□□ -1.03
LSM5-202ENST00000409292 CCNT1O60563 726 aaKnown RBP8.59□□□□□ -1.03
LSM5-202ENST00000409292 SPATA31D3P0C874 917 aa8.59□□□□□ -1.03
LSM5-202ENST00000409292 MYBP10242 640 aa8.59□□□□□ -1.03
LSM5-202ENST00000409292 SCNN1GP51170 649 aa8.59□□□□□ -1.03
LSM5-202ENST00000409292 NPEPPSP55786 919 aa8.59□□□□□ -1.03
LSM5-202ENST00000409292 STARD6P59095 220 aa8.59□□□□□ -1.03
LSM5-202ENST00000409292 LMNB2Q03252 620 aa8.59□□□□□ -1.03
LSM5-202ENST00000409292 POU5F1BQ06416 359 aa8.59□□□□□ -1.03
LSM5-202ENST00000409292 COL9A3Q14050 684 aaPredicted RBP8.59□□□□□ -1.03
LSM5-202ENST00000409292 UBXN2BQ14CS0 331 aa8.59□□□□□ -1.03
LSM5-202ENST00000409292 INF2Q27J81 1249 aa8.59□□□□□ -1.03
LSM5-202ENST00000409292 ZBTB41Q5SVQ8 909 aa8.59□□□□□ -1.03
LSM5-202ENST00000409292 NCAPH2Q6IBW4 605 aa8.59□□□□□ -1.03
LSM5-202ENST00000409292 SLC27A1Q6PCB7 646 aa8.59□□□□□ -1.03
LSM5-202ENST00000409292 SPATA31D4Q6ZUB0 917 aa8.59□□□□□ -1.03
LSM5-202ENST00000409292 GLYCTKQ8IVS8 523 aa8.59□□□□□ -1.03
LSM5-202ENST00000409292 ZBTB8OSQ8IWT0 167 aa8.59□□□□□ -1.03
LSM5-202ENST00000409292 CYP4X1Q8N118 509 aa8.59□□□□□ -1.03
LSM5-202ENST00000409292 DAGLBQ8NCG7 672 aa8.59□□□□□ -1.03
LSM5-202ENST00000409292 ETNPPLQ8TBG4 499 aa8.59□□□□□ -1.03
LSM5-202ENST00000409292 WASF1Q92558 559 aa8.59□□□□□ -1.03
LSM5-202ENST00000409292 RMDN1Q96DB5 314 aa8.59□□□□□ -1.03
LSM5-202ENST00000409292 ADPGKQ9BRR6 497 aa8.59□□□□□ -1.03
LSM5-202ENST00000409292 LXNQ9BS40 222 aa8.59□□□□□ -1.03
LSM5-202ENST00000409292 PHF20Q9BVI0 1012 aa8.59□□□□□ -1.03
LSM5-202ENST00000409292 GMEB2Q9UKD1 530 aa8.59□□□□□ -1.03
LSM5-202ENST00000409292 ADAM28Q9UKQ2 775 aa8.59□□□□□ -1.03
LSM5-202ENST00000409292 CDV3Q9UKY7 258 aaKnown RBP8.59□□□□□ -1.03
LSM5-202ENST00000409292 PCDHGA2Q9Y5H1 932 aa8.59□□□□□ -1.03
LSM5-202ENST00000409292 NUMBLQ9Y6R0 609 aa8.59□□□□□ -1.03
LSM5-202ENST00000409292 C5orf42Q9H799 3197 aa8.59□□□□□ -1.03
LSM5-202ENST00000409292 ZMYM2Q9UBW7 1377 aa8.59□□□□□ -1.03
LSM5-202ENST00000409292 DENND4AQ7Z401 1863 aa8.58□□□□□ -1.04
LSM5-202ENST00000409292 ANHXE9PGG2 379 aa8.58□□□□□ -1.04
LSM5-202ENST00000409292 TRAPPC3O43617 180 aa8.58□□□□□ -1.04
LSM5-202ENST00000409292 TSPAN1O60635 241 aa8.58□□□□□ -1.04
LSM5-202ENST00000409292 STBD1O95210 358 aa8.58□□□□□ -1.04
LSM5-202ENST00000409292 C8AP07357 584 aa8.58□□□□□ -1.04
LSM5-202ENST00000409292 PDIA3P30101 505 aaKnown RBP8.58□□□□□ -1.04
LSM5-202ENST00000409292 HOXA9P31269 272 aa8.58□□□□□ -1.04
LSM5-202ENST00000409292 HOXA11P31270 313 aaPredicted RBP8.58□□□□□ -1.04
LSM5-202ENST00000409292 NRLP54845 237 aa8.58□□□□□ -1.04
LSM5-202ENST00000409292 PTENP60484 403 aa8.58□□□□□ -1.04
LSM5-202ENST00000409292 DSC1Q08554 894 aa8.58□□□□□ -1.04
LSM5-202ENST00000409292 HTR4Q13639 388 aa8.58□□□□□ -1.04
LSM5-202ENST00000409292 HSP90AA2PQ14568 343 aaPredicted RBP8.58□□□□□ -1.04
LSM5-202ENST00000409292 MLF2Q15773 248 aaPredicted RBP8.58□□□□□ -1.04
LSM5-202ENST00000409292 NTRK3Q16288 839 aa8.58□□□□□ -1.04
LSM5-202ENST00000409292 UBXN11Q5T124 520 aa8.58□□□□□ -1.04
LSM5-202ENST00000409292 B3GNT9Q6UX72 402 aa8.58□□□□□ -1.04
LSM5-202ENST00000409292 CENPQQ7L2Z9 268 aaPredicted RBP8.58□□□□□ -1.04
LSM5-202ENST00000409292 RTL10Q7L3V2 364 aa8.58□□□□□ -1.04
LSM5-202ENST00000409292 GRASPQ7Z6J2 395 aaPredicted RBP8.58□□□□□ -1.04
LSM5-202ENST00000409292 RETREG3Q86VR2 466 aa8.58□□□□□ -1.04
LSM5-202ENST00000409292 CEP57Q86XR8 500 aa8.58□□□□□ -1.04
LSM5-202ENST00000409292 TPH2Q8IWU9 490 aa8.58□□□□□ -1.04
LSM5-202ENST00000409292 GJA10Q969M2 543 aa8.58□□□□□ -1.04
LSM5-202ENST00000409292 MBOAT7Q96N66 472 aa8.58□□□□□ -1.04
LSM5-202ENST00000409292 CEP89Q96ST8 783 aa8.58□□□□□ -1.04
LSM5-202ENST00000409292 TTPALQ9BTX7 342 aa8.58□□□□□ -1.04
LSM5-202ENST00000409292 FAM126AQ9BYI3 521 aaPredicted RBP8.58□□□□□ -1.04
LSM5-202ENST00000409292 CHST7Q9NS84 486 aa8.58□□□□□ -1.04
LSM5-202ENST00000409292 MARCH5Q9NX47 278 aa8.58□□□□□ -1.04
LSM5-202ENST00000409292 CYP46A1Q9Y6A2 500 aa8.58□□□□□ -1.04
LSM5-202ENST00000409292 WDFY4Q6ZS81 3184 aa8.57□□□□□ -1.04
LSM5-202ENST00000409292 WDR81Q562E7 1941 aa8.57□□□□□ -1.04
LSM5-202ENST00000409292 FAM170BA6NMN3 283 aa8.57□□□□□ -1.04
LSM5-202ENST00000409292 MAN2B1O00754 1011 aa8.57□□□□□ -1.04
LSM5-202ENST00000409292 TBC1D4O60343 1298 aa8.57□□□□□ -1.04
LSM5-202ENST00000409292 N4BP1O75113 896 aaKnown RBP8.57□□□□□ -1.04
LSM5-202ENST00000409292 NPTXRO95502 500 aa8.57□□□□□ -1.04
LSM5-202ENST00000409292 THP07101 528 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms