RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 TRIM29Q14134 588 aa10.16□□□□□ -0.78
NIF3L1-203ENST00000409129 USP41Q3LFD5 358 aa10.16□□□□□ -0.78
NIF3L1-203ENST00000409129 SLC27A1Q6PCB7 646 aa10.16□□□□□ -0.78
NIF3L1-203ENST00000409129 SPATA31D4Q6ZUB0 917 aa10.16□□□□□ -0.78
NIF3L1-203ENST00000409129 CDR2LQ86X02 465 aaPredicted RBP10.16□□□□□ -0.78
NIF3L1-203ENST00000409129 DIS3L2Q8IYB7 885 aaKnown RBP10.16□□□□□ -0.78
NIF3L1-203ENST00000409129 GPR65Q8IYL9 337 aa10.16□□□□□ -0.78
NIF3L1-203ENST00000409129 SUMF1Q8NBK3 374 aa10.16□□□□□ -0.78
NIF3L1-203ENST00000409129 NSUN7Q8NE18 718 aaKnown RBP10.16□□□□□ -0.78
NIF3L1-203ENST00000409129 GSTCDQ8NEC7 633 aa10.16□□□□□ -0.78
NIF3L1-203ENST00000409129 CHAMP1Q96JM3 812 aa10.16□□□□□ -0.78
NIF3L1-203ENST00000409129 RTP3Q9BQQ7 232 aa10.16□□□□□ -0.78
NIF3L1-203ENST00000409129 GPR62Q9BZJ7 368 aa10.16□□□□□ -0.78
NIF3L1-203ENST00000409129 POLR3FQ9H1D9 316 aaPredicted RBP10.16□□□□□ -0.78
NIF3L1-203ENST00000409129 SEMA4AQ9H3S1 761 aa10.16□□□□□ -0.78
NIF3L1-203ENST00000409129 NXF3Q9H4D5 531 aaKnown RBP10.16□□□□□ -0.78
NIF3L1-203ENST00000409129 WDR6Q9NNW5 1121 aaKnown RBP10.16□□□□□ -0.78
NIF3L1-203ENST00000409129 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.16□□□□□ -0.78
NIF3L1-203ENST00000409129 IGSF9Q9P2J2 1179 aa10.16□□□□□ -0.78
NIF3L1-203ENST00000409129 PARP2Q9UGN5 583 aa10.16□□□□□ -0.78
NIF3L1-203ENST00000409129 DUSP12Q9UNI6 340 aa10.16□□□□□ -0.78
NIF3L1-203ENST00000409129 USO1O60763 962 aaKnown RBP10.15□□□□□ -0.78
NIF3L1-203ENST00000409129 TADA2AO75478 443 aa10.15□□□□□ -0.78
NIF3L1-203ENST00000409129 RFPL2O75678 378 aa10.15□□□□□ -0.78
NIF3L1-203ENST00000409129 PAPLNO95428 1278 aa10.15□□□□□ -0.78
NIF3L1-203ENST00000409129 ADRB1P08588 477 aa10.15□□□□□ -0.78
NIF3L1-203ENST00000409129 CFHP08603 1231 aa10.15□□□□□ -0.78
NIF3L1-203ENST00000409129 SP9P0CG40 484 aa10.15□□□□□ -0.78
NIF3L1-203ENST00000409129 SPATA31C1P0DKV0 1188 aa10.15□□□□□ -0.78
NIF3L1-203ENST00000409129 MYBP10242 640 aa10.15□□□□□ -0.78
NIF3L1-203ENST00000409129 GBP2P32456 591 aaPredicted RBP10.15□□□□□ -0.78
NIF3L1-203ENST00000409129 GRIK3Q13003 919 aa10.15□□□□□ -0.78
NIF3L1-203ENST00000409129 FUT10Q6P4F1 479 aa10.15□□□□□ -0.78
NIF3L1-203ENST00000409129 MAEAQ7L5Y9 396 aa10.15□□□□□ -0.78
NIF3L1-203ENST00000409129 PALB2Q86YC2 1186 aa10.15□□□□□ -0.78
NIF3L1-203ENST00000409129 SMG7Q92540 1137 aaKnown RBP10.15□□□□□ -0.78
NIF3L1-203ENST00000409129 STAMQ92783 540 aa10.15□□□□□ -0.78
NIF3L1-203ENST00000409129 ZNF707Q96C28 371 aaPredicted RBP10.15□□□□□ -0.78
NIF3L1-203ENST00000409129 B3GALT6Q96L58 329 aa10.15□□□□□ -0.78
NIF3L1-203ENST00000409129 TMEM60Q9H2L4 133 aa10.15□□□□□ -0.78
NIF3L1-203ENST00000409129 PLEKHA4Q9H4M7 779 aa10.15□□□□□ -0.78
NIF3L1-203ENST00000409129 TUFT1Q9NNX1 390 aa10.15□□□□□ -0.78
NIF3L1-203ENST00000409129 PRMT7Q9NVM4 692 aaPredicted RBP10.15□□□□□ -0.78
NIF3L1-203ENST00000409129 KLK14Q9P0G3 267 aa10.15□□□□□ -0.78
NIF3L1-203ENST00000409129 FNIP2Q9P278 1114 aa10.15□□□□□ -0.78
NIF3L1-203ENST00000409129 ADAM28Q9UKQ2 775 aa10.15□□□□□ -0.78
NIF3L1-203ENST00000409129 CA14Q9ULX7 337 aa10.15□□□□□ -0.78
NIF3L1-203ENST00000409129 SPEGQ15772 3267 aa10.15□□□□□ -0.78
NIF3L1-203ENST00000409129 ZMYM2Q9UBW7 1377 aa10.14□□□□□ -0.79
NIF3L1-203ENST00000409129 ZZEF1O43149 2961 aa10.14□□□□□ -0.79
NIF3L1-203ENST00000409129 ARID2Q68CP9 1835 aa10.14□□□□□ -0.79
NIF3L1-203ENST00000409129 CLUHO75153 1309 aa10.14□□□□□ -0.79
NIF3L1-203ENST00000409129 LRRIQ4A6NIV6 560 aa10.14□□□□□ -0.79
NIF3L1-203ENST00000409129 TGM5O43548 720 aa10.14□□□□□ -0.79
NIF3L1-203ENST00000409129 JAK2O60674 1132 aa10.14□□□□□ -0.79
NIF3L1-203ENST00000409129 ATP2B1P20020 1258 aa10.14□□□□□ -0.79
NIF3L1-203ENST00000409129 NEK4P51957 841 aa10.14□□□□□ -0.79
NIF3L1-203ENST00000409129 FOSBP53539 338 aa10.14□□□□□ -0.79
NIF3L1-203ENST00000409129 CREMQ03060 361 aa10.14□□□□□ -0.79
NIF3L1-203ENST00000409129 FAM187BQ17R55 369 aa10.14□□□□□ -0.79
NIF3L1-203ENST00000409129 LILRA6Q6PI73 481 aa10.14□□□□□ -0.79
NIF3L1-203ENST00000409129 CATSPER3Q86XQ3 398 aa10.14□□□□□ -0.79
NIF3L1-203ENST00000409129 MCPH1Q8NEM0 835 aa10.14□□□□□ -0.79
NIF3L1-203ENST00000409129 RSAD2Q8WXG1 361 aa10.14□□□□□ -0.79
NIF3L1-203ENST00000409129 RABGGTAQ92696 567 aa10.14□□□□□ -0.79
NIF3L1-203ENST00000409129 NXPE3Q969Y0 559 aa10.14□□□□□ -0.79
NIF3L1-203ENST00000409129 PRIMPOLQ96LW4 560 aa10.14□□□□□ -0.79
NIF3L1-203ENST00000409129 NACC1Q96RE7 527 aa10.14□□□□□ -0.79
NIF3L1-203ENST00000409129 MYADMQ96S97 322 aa10.14□□□□□ -0.79
NIF3L1-203ENST00000409129 POLR3CQ9BUI4 534 aaPredicted RBP10.14□□□□□ -0.79
NIF3L1-203ENST00000409129 NT5C3AQ9H0P0 336 aa10.14□□□□□ -0.79
NIF3L1-203ENST00000409129 FZD8Q9H461 694 aa10.14□□□□□ -0.79
NIF3L1-203ENST00000409129 PIDD1Q9HB75 910 aa10.14□□□□□ -0.79
NIF3L1-203ENST00000409129 GPRC5CQ9NQ84 441 aa10.14□□□□□ -0.79
NIF3L1-203ENST00000409129 ZDHHC7Q9NXF8 308 aa10.14□□□□□ -0.79
NIF3L1-203ENST00000409129 EPS15L1Q9UBC2 864 aa10.14□□□□□ -0.79
NIF3L1-203ENST00000409129 WNT16Q9UBV4 365 aa10.14□□□□□ -0.79
NIF3L1-203ENST00000409129 SETXQ7Z333 2677 aaKnown RBP10.14□□□□□ -0.79
NIF3L1-203ENST00000409129 MTCL1Q9Y4B5 1905 aaKnown RBP10.13□□□□□ -0.79
NIF3L1-203ENST00000409129 DPYSL4O14531 572 aa10.13□□□□□ -0.79
NIF3L1-203ENST00000409129 N4BP3O15049 544 aa10.13□□□□□ -0.79
NIF3L1-203ENST00000409129 LRRN2O75325 713 aa10.13□□□□□ -0.79
NIF3L1-203ENST00000409129 MED24O75448 989 aa10.13□□□□□ -0.79
NIF3L1-203ENST00000409129 GLULP15104 373 aa10.13□□□□□ -0.79
NIF3L1-203ENST00000409129 RPL17P18621 184 aaKnown RBP10.13□□□□□ -0.79
NIF3L1-203ENST00000409129 MCM7P33993 719 aa10.13□□□□□ -0.79
NIF3L1-203ENST00000409129 TUSC3Q13454 348 aa10.13□□□□□ -0.79
NIF3L1-203ENST00000409129 HSP90AA2PQ14568 343 aaPredicted RBP10.13□□□□□ -0.79
NIF3L1-203ENST00000409129 CDCA2Q69YH5 1023 aaPredicted RBP10.13□□□□□ -0.79
NIF3L1-203ENST00000409129 GLYCTKQ8IVS8 523 aa10.13□□□□□ -0.79
NIF3L1-203ENST00000409129 ZBTB8OSQ8IWT0 167 aa10.13□□□□□ -0.79
NIF3L1-203ENST00000409129 SLC44A3Q8N4M1 653 aa10.13□□□□□ -0.79
NIF3L1-203ENST00000409129 PRKD2Q9BZL6 878 aa10.13□□□□□ -0.79
NIF3L1-203ENST00000409129 C2orf40Q9H1Z8 148 aa10.13□□□□□ -0.79
NIF3L1-203ENST00000409129 TBC1D17Q9HA65 648 aa10.13□□□□□ -0.79
NIF3L1-203ENST00000409129 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.13□□□□□ -0.79
NIF3L1-203ENST00000409129 CDV3Q9UKY7 258 aaKnown RBP10.13□□□□□ -0.79
NIF3L1-203ENST00000409129 SF3B1O75533 1304 aaKnown RBP eCLIP10.12□□□□□ -0.79
NIF3L1-203ENST00000409129 ZMYND10O75800 440 aa10.12□□□□□ -0.79
NIF3L1-203ENST00000409129 THP07101 528 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms