RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 PPP1R14CQ8TAE6 165 aa8.87□□□□□ -0.99
SNX13-201ENST00000409076 LRRC8CQ8TDW0 803 aa8.87□□□□□ -0.99
SNX13-201ENST00000409076 CCDC77Q9BR77 488 aa8.87□□□□□ -0.99
SNX13-201ENST00000409076 OSBPL1AQ9BXW6 950 aa8.87□□□□□ -0.99
SNX13-201ENST00000409076 PACSIN3Q9UKS6 424 aa8.87□□□□□ -0.99
SNX13-201ENST00000409076 NID2Q14112 1375 aa8.87□□□□□ -0.99
SNX13-201ENST00000409076 DDX3YO15523 660 aaKnown RBP8.87□□□□□ -0.99
SNX13-201ENST00000409076 TMEM253P0C7T8 217 aa8.87□□□□□ -0.99
SNX13-201ENST00000409076 FNTAP49354 379 aa8.87□□□□□ -0.99
SNX13-201ENST00000409076 SMTNP53814 917 aa8.87□□□□□ -0.99
SNX13-201ENST00000409076 HIRAP54198 1017 aaPredicted RBP8.87□□□□□ -0.99
SNX13-201ENST00000409076 POLE2P56282 527 aa8.87□□□□□ -0.99
SNX13-201ENST00000409076 GAD2Q05329 585 aa8.87□□□□□ -0.99
SNX13-201ENST00000409076 PDIA2Q13087 525 aaKnown RBP8.87□□□□□ -0.99
SNX13-201ENST00000409076 AUHQ13825 339 aaKnown RBP8.87□□□□□ -0.99
SNX13-201ENST00000409076 MUM1Q2TAK8 710 aa8.87□□□□□ -0.99
SNX13-201ENST00000409076 C6orf118Q5T5N4 469 aa8.87□□□□□ -0.99
SNX13-201ENST00000409076 APBB1IPQ7Z5R6 666 aaPredicted RBP8.87□□□□□ -0.99
SNX13-201ENST00000409076 EMC1Q8N766 993 aa8.87□□□□□ -0.99
SNX13-201ENST00000409076 GLIS1Q8NBF1 620 aa8.87□□□□□ -0.99
SNX13-201ENST00000409076 IQCDQ96DY2 449 aa8.87□□□□□ -0.99
SNX13-201ENST00000409076 RBM15Q96T37 977 aaKnown RBP eCLIP8.87□□□□□ -0.994e-7■■□□□ 11.6
SNX13-201ENST00000409076 TMEM121Q9BTD3 319 aa8.87□□□□□ -0.99
SNX13-201ENST00000409076 KCNH7Q9NS40 1196 aa8.87□□□□□ -0.99
SNX13-201ENST00000409076 ADAM22Q9P0K1 906 aa8.87□□□□□ -0.99
SNX13-201ENST00000409076 ARMCX1Q9P291 453 aa8.87□□□□□ -0.99
SNX13-201ENST00000409076 SLC12A6Q9UHW9 1150 aa8.87□□□□□ -0.99
SNX13-201ENST00000409076 APBA3O96018 575 aa8.87□□□□□ -0.99
SNX13-201ENST00000409076 ARSEP51690 589 aa8.87□□□□□ -0.99
SNX13-201ENST00000409076 MTMR1Q13613 665 aa8.87□□□□□ -0.99
SNX13-201ENST00000409076 CASC4Q6P4E1 433 aa8.87□□□□□ -0.99
SNX13-201ENST00000409076 SH3BP5LQ7L8J4 393 aa8.87□□□□□ -0.99
SNX13-201ENST00000409076 ETNPPLQ8TBG4 499 aa8.87□□□□□ -0.99
SNX13-201ENST00000409076 MCUR1Q96AQ8 359 aa8.87□□□□□ -0.99
SNX13-201ENST00000409076 CCDC124Q96CT7 223 aaKnown RBP8.87□□□□□ -0.99
SNX13-201ENST00000409076 TAAR1Q96RJ0 339 aa8.87□□□□□ -0.99
SNX13-201ENST00000409076 IQCGQ9H095 443 aaKnown RBP8.87□□□□□ -0.99
SNX13-201ENST00000409076 PCDHA2Q9Y5H9 948 aa8.87□□□□□ -0.99
SNX13-201ENST00000409076 ZHX2Q9Y6X8 837 aa8.87□□□□□ -0.99
SNX13-201ENST00000409076 NUP188Q5SRE5 1749 aa8.86□□□□□ -0.99
SNX13-201ENST00000409076 TLR3O15455 904 aaKnown RBP8.86□□□□□ -0.99
SNX13-201ENST00000409076 MFAP3P55082 362 aa8.86□□□□□ -0.99
SNX13-201ENST00000409076 PTENP60484 403 aa8.86□□□□□ -0.99
SNX13-201ENST00000409076 ADCY2Q08462 1091 aa8.86□□□□□ -0.99
SNX13-201ENST00000409076 BYSLQ13895 437 aaKnown RBP8.86□□□□□ -0.99
SNX13-201ENST00000409076 VPS52Q8N1B4 723 aa8.86□□□□□ -0.99
SNX13-201ENST00000409076 TTC8Q8TAM2 541 aa8.86□□□□□ -0.99
SNX13-201ENST00000409076 RILPQ96NA2 401 aa8.86□□□□□ -0.99
SNX13-201ENST00000409076 ACCSQ96QU6 501 aa8.86□□□□□ -0.99
SNX13-201ENST00000409076 FHDC1Q9C0D6 1143 aaPredicted RBP8.86□□□□□ -0.99
SNX13-201ENST00000409076 SMYD3Q9H7B4 428 aa8.86□□□□□ -0.99
SNX13-201ENST00000409076 ACTR5Q9H9F9 607 aaPredicted RBP8.86□□□□□ -0.99
SNX13-201ENST00000409076 FAM198AQ9UFP1 575 aa8.86□□□□□ -0.99
SNX13-201ENST00000409076 INPP5FQ9Y2H2 1132 aa8.86□□□□□ -0.99
SNX13-201ENST00000409076 USP15Q9Y4E8 981 aaPredicted RBP8.86□□□□□ -0.99
SNX13-201ENST00000409076 MAD1L1Q9Y6D9 718 aa8.86□□□□□ -0.99
SNX13-201ENST00000409076 SPATA31A5Q5VU36 1347 aa8.86□□□□□ -0.99
SNX13-201ENST00000409076 SPATA31A7Q8IWB4 1347 aa8.86□□□□□ -0.99
SNX13-201ENST00000409076 hCG_2014768A0A024R1R8 64 aa8.86□□□□□ -0.99
SNX13-201ENST00000409076 ATP9AO75110 1047 aa8.86□□□□□ -0.99
SNX13-201ENST00000409076 BBOX1O75936 387 aa8.86□□□□□ -0.99
SNX13-201ENST00000409076 FSBPO95073 299 aa8.86□□□□□ -0.99
SNX13-201ENST00000409076 EPHB2P29323 1055 aa8.86□□□□□ -0.99
SNX13-201ENST00000409076 SSTR1P30872 391 aa8.86□□□□□ -0.99
SNX13-201ENST00000409076 DMP1Q13316 513 aaPredicted RBP8.86□□□□□ -0.99
SNX13-201ENST00000409076 PKN2Q16513 984 aaKnown RBP8.86□□□□□ -0.99
SNX13-201ENST00000409076 BRDTQ58F21 947 aaPredicted RBP8.86□□□□□ -0.99
SNX13-201ENST00000409076 SLC10A5Q5PT55 438 aa8.86□□□□□ -0.99
SNX13-201ENST00000409076 PPP4R3CPQ6ZMV5 832 aa8.86□□□□□ -0.99
SNX13-201ENST00000409076 HERPUD2Q9BSE4 406 aa8.86□□□□□ -0.99
SNX13-201ENST00000409076 KCNMB3Q9NPA1 279 aa8.86□□□□□ -0.99
SNX13-201ENST00000409076 USH1CQ9Y6N9 552 aa8.86□□□□□ -0.99
SNX13-201ENST00000409076 MYH11P35749 1972 aa8.86□□□□□ -0.99
SNX13-201ENST00000409076 RPTORQ8N122 1335 aa8.86□□□□□ -0.99
SNX13-201ENST00000409076 SYNGAP1Q96PV0 1343 aa8.86□□□□□ -0.99
SNX13-201ENST00000409076 ESYT2A0FGR8 921 aa8.86□□□□□ -0.99
SNX13-201ENST00000409076 POLRMTO00411 1230 aaKnown RBP8.86□□□□□ -0.99
SNX13-201ENST00000409076 YWHABP31946 246 aaKnown RBP8.86□□□□□ -0.99
SNX13-201ENST00000409076 SCARA3Q6AZY7 606 aa8.86□□□□□ -0.99
SNX13-201ENST00000409076 TMEM179Q6ZVK1 233 aa8.86□□□□□ -0.99
SNX13-201ENST00000409076 OTOP1Q7RTM1 612 aa8.86□□□□□ -0.99
SNX13-201ENST00000409076 FAM228AQ86W67 206 aa8.86□□□□□ -0.99
SNX13-201ENST00000409076 PALM2Q8IXS6 379 aa8.86□□□□□ -0.99
SNX13-201ENST00000409076 HACE1Q8IYU2 909 aa8.86□□□□□ -0.99
SNX13-201ENST00000409076 CCDC89Q8N998 374 aa8.86□□□□□ -0.99
SNX13-201ENST00000409076 KIFAP3Q92845 792 aa8.86□□□□□ -0.99
SNX13-201ENST00000409076 MCEEQ96PE7 176 aa8.86□□□□□ -0.99
SNX13-201ENST00000409076 CDCA7Q9BWT1 371 aaPredicted RBP8.86□□□□□ -0.99
SNX13-201ENST00000409076 PLVAPQ9BX97 442 aa8.86□□□□□ -0.99
SNX13-201ENST00000409076 CHMP2BQ9UQN3 213 aa8.86□□□□□ -0.99
SNX13-201ENST00000409076 TTLL3Q9Y4R7 772 aa8.86□□□□□ -0.99
SNX13-201ENST00000409076 A0A1W2PPM1 405 aa8.85□□□□□ -0.99
SNX13-201ENST00000409076 H0YGN5 161 aa8.85□□□□□ -0.99
SNX13-201ENST00000409076 ENTPD5O75356 428 aa8.85□□□□□ -0.99
SNX13-201ENST00000409076 POTEJP0CG39 1038 aa8.85□□□□□ -0.99
SNX13-201ENST00000409076 CYP11B1P15538 503 aa8.85□□□□□ -0.99
SNX13-201ENST00000409076 BRD2P25440 801 aaKnown RBP8.85□□□□□ -0.99
SNX13-201ENST00000409076 KDSRQ06136 332 aa8.85□□□□□ -0.99
SNX13-201ENST00000409076 DRP2Q13474 957 aa8.85□□□□□ -0.99
SNX13-201ENST00000409076 ZDHHC24Q6UX98 284 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms