RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 PLEKHA5Q9HAU0 1116 aa14.09□□□□□ -0.15
SNORD88B-201ENST00000408454 SNTG2Q9NY99 539 aa14.09□□□□□ -0.15
SNORD88B-201ENST00000408454 ARHGAP28Q9P2N2 729 aa14.09□□□□□ -0.15
SNORD88B-201ENST00000408454 FBXL21Q9UKT6 434 aa14.09□□□□□ -0.15
SNORD88B-201ENST00000408454 SPTBN5Q9NRC6 3674 aaKnown RBP14.09□□□□□ -0.15
SNORD88B-201ENST00000408454 CLUHO75153 1309 aa14.09□□□□□ -0.15
SNORD88B-201ENST00000408454 VWA3AA6NCI4 1184 aa14.08□□□□□ -0.16
SNORD88B-201ENST00000408454 C2CD4DB7Z1M9 353 aa14.08□□□□□ -0.16
SNORD88B-201ENST00000408454 SYN3O14994 580 aa14.08□□□□□ -0.16
SNORD88B-201ENST00000408454 HIP1RO75146 1068 aa14.08□□□□□ -0.16
SNORD88B-201ENST00000408454 PPM1LQ5SGD2 360 aa14.08□□□□□ -0.16
SNORD88B-201ENST00000408454 RINT1Q6NUQ1 792 aa14.08□□□□□ -0.16
SNORD88B-201ENST00000408454 CEP57Q86XR8 500 aa14.08□□□□□ -0.16
SNORD88B-201ENST00000408454 CD302Q8IX05 232 aa14.08□□□□□ -0.16
SNORD88B-201ENST00000408454 APPL2Q8NEU8 664 aa14.08□□□□□ -0.16
SNORD88B-201ENST00000408454 KIF2CQ99661 725 aa14.08□□□□□ -0.16
SNORD88B-201ENST00000408454 RTP3Q9BQQ7 232 aa14.08□□□□□ -0.16
SNORD88B-201ENST00000408454 PRKD2Q9BZL6 878 aa14.08□□□□□ -0.16
SNORD88B-201ENST00000408454 RNF39Q9H2S5 420 aa14.08□□□□□ -0.16
SNORD88B-201ENST00000408454 KLK14Q9P0G3 267 aa14.08□□□□□ -0.16
SNORD88B-201ENST00000408454 GDAQ9Y2T3 454 aa14.08□□□□□ -0.16
SNORD88B-201ENST00000408454 CASTOR2A6NHX0 329 aa14.07□□□□□ -0.16
SNORD88B-201ENST00000408454 WNT7AO00755 349 aa14.07□□□□□ -0.16
SNORD88B-201ENST00000408454 ZMYND10O75800 440 aa14.07□□□□□ -0.16
SNORD88B-201ENST00000408454 FAM13AO94988 1023 aa14.07□□□□□ -0.16
SNORD88B-201ENST00000408454 BRD1O95696 1058 aa14.07□□□□□ -0.16
SNORD88B-201ENST00000408454 MARCKSP29966 332 aaPredicted RBP14.07□□□□□ -0.16
SNORD88B-201ENST00000408454 CLCN5P51795 746 aa14.07□□□□□ -0.16
SNORD88B-201ENST00000408454 RBM10P98175 930 aaKnown RBP14.07□□□□□ -0.16
SNORD88B-201ENST00000408454 NOLC1Q14978 699 aaKnown RBP eCLIP14.07□□□□□ -0.167e-23■■□□□ 11.4
SNORD88B-201ENST00000408454 KRI1Q8N9T8 703 aaKnown RBP14.07□□□□□ -0.16
SNORD88B-201ENST00000408454 BCL7CQ8WUZ0 217 aaPredicted RBP14.07□□□□□ -0.16
SNORD88B-201ENST00000408454 KCNN1Q92952 543 aa14.07□□□□□ -0.16
SNORD88B-201ENST00000408454 SHDQ96IW2 340 aa14.07□□□□□ -0.16
SNORD88B-201ENST00000408454 TBC1D32Q96NH3 1257 aa14.07□□□□□ -0.16
SNORD88B-201ENST00000408454 ACO2Q99798 780 aaKnown RBP14.07□□□□□ -0.16
SNORD88B-201ENST00000408454 LRRC27Q9C0I9 530 aa14.07□□□□□ -0.16
SNORD88B-201ENST00000408454 PARVGQ9HBI0 331 aa14.07□□□□□ -0.16
SNORD88B-201ENST00000408454 BACE2Q9Y5Z0 518 aa14.07□□□□□ -0.16
SNORD88B-201ENST00000408454 MYO7AQ13402 2215 aa14.06□□□□□ -0.16
SNORD88B-201ENST00000408454 TDRD15B5MCY1 1934 aaKnown RBP14.06□□□□□ -0.16
SNORD88B-201ENST00000408454 E9PMD0 336 aa14.06□□□□□ -0.16
SNORD88B-201ENST00000408454 TGM5O43548 720 aa14.06□□□□□ -0.16
SNORD88B-201ENST00000408454 PAPLNO95428 1278 aa14.06□□□□□ -0.16
SNORD88B-201ENST00000408454 EFEMP2O95967 443 aa14.06□□□□□ -0.16
SNORD88B-201ENST00000408454 CLTAP09496 248 aa14.06□□□□□ -0.16
SNORD88B-201ENST00000408454 PLA2G4BP0C869 781 aa14.06□□□□□ -0.16
SNORD88B-201ENST00000408454 KCNE1P15382 129 aa14.06□□□□□ -0.16
SNORD88B-201ENST00000408454 HOXD11P31277 338 aaPredicted RBP14.06□□□□□ -0.16
SNORD88B-201ENST00000408454 LIG4P49917 911 aa14.06□□□□□ -0.16
SNORD88B-201ENST00000408454 TOB1P50616 345 aaPredicted RBP14.06□□□□□ -0.16
SNORD88B-201ENST00000408454 PFKPQ01813 784 aa14.06□□□□□ -0.16
SNORD88B-201ENST00000408454 POU5F1Q01860 360 aaKnown RBP14.06□□□□□ -0.16
SNORD88B-201ENST00000408454 PPP2R3AQ06190 1150 aa14.06□□□□□ -0.16
SNORD88B-201ENST00000408454 SLFN12LQ6IEE8 588 aa14.06□□□□□ -0.16
SNORD88B-201ENST00000408454 C1orf186Q6ZWK4 172 aa14.06□□□□□ -0.16
SNORD88B-201ENST00000408454 CDR2LQ86X02 465 aaPredicted RBP14.06□□□□□ -0.16
SNORD88B-201ENST00000408454 PALB2Q86YC2 1186 aa14.06□□□□□ -0.16
SNORD88B-201ENST00000408454 LEMD2Q8NC56 503 aa14.06□□□□□ -0.16
SNORD88B-201ENST00000408454 GSTCDQ8NEC7 633 aa14.06□□□□□ -0.16
SNORD88B-201ENST00000408454 EPS15L1Q9UBC2 864 aa14.06□□□□□ -0.16
SNORD88B-201ENST00000408454 STK17AQ9UEE5 414 aa14.06□□□□□ -0.16
SNORD88B-201ENST00000408454 LIMD1Q9UGP4 676 aa14.06□□□□□ -0.16
SNORD88B-201ENST00000408454 DUSP12Q9UNI6 340 aa14.06□□□□□ -0.16
SNORD88B-201ENST00000408454 EXOC7Q9UPT5 735 aa14.06□□□□□ -0.16
SNORD88B-201ENST00000408454 XIRP2A4UGR9 3374 aa14.06□□□□□ -0.16
SNORD88B-201ENST00000408454 HNRNPDLO14979 420 aaKnown RBP14.05□□□□□ -0.16
SNORD88B-201ENST00000408454 KIF4AO95239 1232 aa14.05□□□□□ -0.16
SNORD88B-201ENST00000408454 LRG1P02750 347 aa14.05□□□□□ -0.16
SNORD88B-201ENST00000408454 SP100P23497 879 aaPredicted RBP14.05□□□□□ -0.16
SNORD88B-201ENST00000408454 PLD1Q13393 1074 aa14.05□□□□□ -0.16
SNORD88B-201ENST00000408454 ALCAMQ13740 583 aa14.05□□□□□ -0.16
SNORD88B-201ENST00000408454 RAB33AQ14088 237 aa14.05□□□□□ -0.16
SNORD88B-201ENST00000408454 TPGS2Q68CL5 300 aa14.05□□□□□ -0.16
SNORD88B-201ENST00000408454 ZNF280DQ6N043 979 aa14.05□□□□□ -0.16
SNORD88B-201ENST00000408454 STXBP4Q6ZWJ1 553 aa14.05□□□□□ -0.16
SNORD88B-201ENST00000408454 C12orf76Q8N812 135 aaPredicted RBP14.05□□□□□ -0.16
SNORD88B-201ENST00000408454 BSNDQ8WZ55 320 aa14.05□□□□□ -0.16
SNORD88B-201ENST00000408454 HVCN1Q96D96 273 aa14.05□□□□□ -0.16
SNORD88B-201ENST00000408454 BORCS6Q96GS4 357 aa14.05□□□□□ -0.16
SNORD88B-201ENST00000408454 INTS4Q96HW7 963 aaKnown RBP14.05□□□□□ -0.16
SNORD88B-201ENST00000408454 PPP1R10Q96QC0 940 aaKnown RBP14.05□□□□□ -0.16
SNORD88B-201ENST00000408454 VN1R3Q9BXE9 311 aa14.05□□□□□ -0.16
SNORD88B-201ENST00000408454 GPR62Q9BZJ7 368 aa14.05□□□□□ -0.16
SNORD88B-201ENST00000408454 CDT1Q9H211 546 aa14.05□□□□□ -0.16
SNORD88B-201ENST00000408454 ZSCAN16Q9H4T2 348 aaPredicted RBP14.05□□□□□ -0.16
SNORD88B-201ENST00000408454 MIOSQ9NXC5 875 aa14.05□□□□□ -0.16
SNORD88B-201ENST00000408454 ANKFY1Q9P2R3 1169 aa14.05□□□□□ -0.16
SNORD88B-201ENST00000408454 SEL1LQ9UBV2 794 aa14.05□□□□□ -0.16
SNORD88B-201ENST00000408454 WNT16Q9UBV4 365 aa14.05□□□□□ -0.16
SNORD88B-201ENST00000408454 FBXW11Q9UKB1 542 aa14.05□□□□□ -0.16
SNORD88B-201ENST00000408454 KCNH3Q9ULD8 1083 aa14.05□□□□□ -0.16
SNORD88B-201ENST00000408454 SMIM28A0A1B0GU29 152 aa14.04□□□□□ -0.16
SNORD88B-201ENST00000408454 VPS37CA5D8V6 355 aaPredicted RBP14.04□□□□□ -0.16
SNORD88B-201ENST00000408454 PTGESO14684 152 aa14.04□□□□□ -0.16
SNORD88B-201ENST00000408454 ZNF197O14709 1029 aa14.04□□□□□ -0.16
SNORD88B-201ENST00000408454 DTNBO60941 627 aa14.04□□□□□ -0.16
SNORD88B-201ENST00000408454 C8AP07357 584 aa14.04□□□□□ -0.16
SNORD88B-201ENST00000408454 CYP3A5P20815 502 aa14.04□□□□□ -0.16
SNORD88B-201ENST00000408454 FGFR3P22607 806 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms