RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 MYOCOSA0A1B0GUC4 107 aa5.77□□□□□ -1.49
HMGB3P18-201ENST00000406327 hCG_1642624A0A1W2PR95 340 aa5.77□□□□□ -1.49
HMGB3P18-201ENST00000406327 CCDC189A1A4V9 331 aa5.77□□□□□ -1.49
HMGB3P18-201ENST00000406327 ZNF503-AS2A6NEH8 195 aa5.77□□□□□ -1.49
HMGB3P18-201ENST00000406327 LRRC14BA6NHZ5 514 aa5.77□□□□□ -1.49
HMGB3P18-201ENST00000406327 ADCY6O43306 1168 aa5.77□□□□□ -1.49
HMGB3P18-201ENST00000406327 KLHL18O94889 574 aa5.77□□□□□ -1.49
HMGB3P18-201ENST00000406327 IL18RAPO95256 599 aa5.77□□□□□ -1.49
HMGB3P18-201ENST00000406327 PAPLNO95428 1278 aa5.77□□□□□ -1.49
HMGB3P18-201ENST00000406327 JUNP05412 331 aaKnown RBP5.77□□□□□ -1.49
HMGB3P18-201ENST00000406327 BRAFP15056 766 aa5.77□□□□□ -1.49
HMGB3P18-201ENST00000406327 ZNF28P17035 718 aa5.77□□□□□ -1.49
HMGB3P18-201ENST00000406327 ITGB5P18084 799 aa5.77□□□□□ -1.49
HMGB3P18-201ENST00000406327 TNFSF4P23510 183 aa5.77□□□□□ -1.49
HMGB3P18-201ENST00000406327 PPM1FP49593 454 aaPredicted RBP5.77□□□□□ -1.49
HMGB3P18-201ENST00000406327 CTXN1P60606 82 aa5.77□□□□□ -1.49
HMGB3P18-201ENST00000406327 TNFAIP2Q03169 654 aa5.77□□□□□ -1.49
HMGB3P18-201ENST00000406327 SP140Q13342 867 aa5.77□□□□□ -1.49
HMGB3P18-201ENST00000406327 SMAD4Q13485 552 aaKnown RBP5.77□□□□□ -1.49
HMGB3P18-201ENST00000406327 RTP5Q14D33 572 aa5.77□□□□□ -1.49
HMGB3P18-201ENST00000406327 CNGA2Q16280 664 aa5.77□□□□□ -1.49
HMGB3P18-201ENST00000406327 ZNF568Q3ZCX4 644 aa5.77□□□□□ -1.49
HMGB3P18-201ENST00000406327 GAGE13Q4V321 117 aa5.77□□□□□ -1.49
HMGB3P18-201ENST00000406327 KRT40Q6A162 431 aa5.77□□□□□ -1.49
HMGB3P18-201ENST00000406327 CPXCR1Q8N123 301 aa5.77□□□□□ -1.49
HMGB3P18-201ENST00000406327 FBXO15Q8NCQ5 510 aaPredicted RBP5.77□□□□□ -1.49
HMGB3P18-201ENST00000406327 MYRIPQ8NFW9 859 aa5.77□□□□□ -1.49
HMGB3P18-201ENST00000406327 PNISRQ8TF01 805 aaKnown RBP5.77□□□□□ -1.49
HMGB3P18-201ENST00000406327 POF1BQ8WVV4 589 aa5.77□□□□□ -1.49
HMGB3P18-201ENST00000406327 BRI3BPQ8WY22 251 aa5.77□□□□□ -1.49
HMGB3P18-201ENST00000406327 ZCCHC14Q8WYQ9 949 aaKnown RBP5.77□□□□□ -1.49
HMGB3P18-201ENST00000406327 LIN37Q96GY3 246 aaPredicted RBP5.77□□□□□ -1.49
HMGB3P18-201ENST00000406327 SCLT1Q96NL6 688 aa5.77□□□□□ -1.49
HMGB3P18-201ENST00000406327 CDC5LQ99459 802 aaKnown RBP5.77□□□□□ -1.49
HMGB3P18-201ENST00000406327 NAP1L4Q99733 375 aaKnown RBP5.77□□□□□ -1.49
HMGB3P18-201ENST00000406327 VRK1Q99986 396 aaPredicted RBP5.77□□□□□ -1.49
HMGB3P18-201ENST00000406327 OR10A2Q9H208 303 aa5.77□□□□□ -1.49
HMGB3P18-201ENST00000406327 VPS11Q9H270 941 aa5.77□□□□□ -1.49
HMGB3P18-201ENST00000406327 ATP6V0A4Q9HBG4 840 aa5.77□□□□□ -1.49
HMGB3P18-201ENST00000406327 BARX1Q9HBU1 254 aaPredicted RBP5.77□□□□□ -1.49
HMGB3P18-201ENST00000406327 FAM184BQ9ULE4 1060 aa5.77□□□□□ -1.49
HMGB3P18-201ENST00000406327 SIK3Q9Y2K2 1263 aa5.77□□□□□ -1.49
HMGB3P18-201ENST00000406327 CTDP1Q9Y5B0 961 aaPredicted RBP5.77□□□□□ -1.49
HMGB3P18-201ENST00000406327 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.76□□□□□ -1.49
HMGB3P18-201ENST00000406327 MYO1FO00160 1098 aa5.76□□□□□ -1.49
HMGB3P18-201ENST00000406327 KPNA5O15131 536 aa5.76□□□□□ -1.49
HMGB3P18-201ENST00000406327 ITGA10O75578 1167 aa5.76□□□□□ -1.49
HMGB3P18-201ENST00000406327 TYRP1P17643 537 aa5.76□□□□□ -1.49
HMGB3P18-201ENST00000406327 GUCY1A2P33402 732 aa5.76□□□□□ -1.49
HMGB3P18-201ENST00000406327 STT3AP46977 705 aa5.76□□□□□ -1.49
HMGB3P18-201ENST00000406327 MRE11P49959 708 aa5.76□□□□□ -1.49
HMGB3P18-201ENST00000406327 MLLT6P55198 1093 aaPredicted RBP5.76□□□□□ -1.49
HMGB3P18-201ENST00000406327 CREMQ03060 361 aa5.76□□□□□ -1.49
HMGB3P18-201ENST00000406327 PTH1RQ03431 593 aa5.76□□□□□ -1.49
HMGB3P18-201ENST00000406327 POU5F1BQ06416 359 aa5.76□□□□□ -1.49
HMGB3P18-201ENST00000406327 DAG1Q14118 895 aa5.76□□□□□ -1.49
HMGB3P18-201ENST00000406327 USP10Q14694 798 aaKnown RBP5.76□□□□□ -1.49
HMGB3P18-201ENST00000406327 PCOLCEQ15113 449 aa5.76□□□□□ -1.49
HMGB3P18-201ENST00000406327 ZNF827Q17R98 1081 aa5.76□□□□□ -1.49
HMGB3P18-201ENST00000406327 FLYWCH1Q4VC44 716 aa5.76□□□□□ -1.49
HMGB3P18-201ENST00000406327 SLC44A4Q53GD3 710 aa5.76□□□□□ -1.49
HMGB3P18-201ENST00000406327 KHDC1LQ5JSQ8 128 aa5.76□□□□□ -1.49
HMGB3P18-201ENST00000406327 PRR31Q5SQ13 230 aa5.76□□□□□ -1.49
HMGB3P18-201ENST00000406327 Q6ZUG5 572 aa5.76□□□□□ -1.49
HMGB3P18-201ENST00000406327 SH2D3CQ8N5H7 860 aa5.76□□□□□ -1.49
HMGB3P18-201ENST00000406327 MSL3Q8N5Y2 521 aaKnown RBP5.76□□□□□ -1.49
HMGB3P18-201ENST00000406327 KBTBD7Q8WVZ9 684 aa5.76□□□□□ -1.49
HMGB3P18-201ENST00000406327 TRIM63Q969Q1 353 aa5.76□□□□□ -1.49
HMGB3P18-201ENST00000406327 AJUBAQ96IF1 538 aa5.76□□□□□ -1.49
HMGB3P18-201ENST00000406327 MSLNLQ96KJ4 702 aa5.76□□□□□ -1.49
HMGB3P18-201ENST00000406327 SIGLEC10Q96LC7 697 aa5.76□□□□□ -1.49
HMGB3P18-201ENST00000406327 NOX5Q96PH1 765 aa5.76□□□□□ -1.49
HMGB3P18-201ENST00000406327 DMRTA2Q96SC8 542 aa5.76□□□□□ -1.49
HMGB3P18-201ENST00000406327 SYT3Q9BQG1 590 aa5.76□□□□□ -1.49
HMGB3P18-201ENST00000406327 WDR12Q9GZL7 423 aaKnown RBP5.76□□□□□ -1.49
HMGB3P18-201ENST00000406327 KATNBL1Q9H079 304 aa5.76□□□□□ -1.49
HMGB3P18-201ENST00000406327 SERHLQ9NQF3 203 aa5.76□□□□□ -1.49
HMGB3P18-201ENST00000406327 SPATA6Q9NWH7 488 aaPredicted RBP5.76□□□□□ -1.49
HMGB3P18-201ENST00000406327 NTMQ9P121 344 aa5.76□□□□□ -1.49
HMGB3P18-201ENST00000406327 STAP2Q9UGK3 403 aa5.76□□□□□ -1.49
HMGB3P18-201ENST00000406327 AJAP1Q9UKB5 411 aaPredicted RBP5.76□□□□□ -1.49
HMGB3P18-201ENST00000406327 IRAK3Q9Y616 596 aa5.76□□□□□ -1.49
HMGB3P18-201ENST00000406327 TBX3O15119 743 aa5.75□□□□□ -1.49
HMGB3P18-201ENST00000406327 SH3BP5O60239 455 aa5.75□□□□□ -1.49
HMGB3P18-201ENST00000406327 GNAI3P08754 354 aa5.75□□□□□ -1.49
HMGB3P18-201ENST00000406327 PARP1P09874 1014 aaKnown RBP5.75□□□□□ -1.49
HMGB3P18-201ENST00000406327 VSIG10L2P0DP72 767 aa5.75□□□□□ -1.49
HMGB3P18-201ENST00000406327 EN2P19622 333 aaPredicted RBP5.75□□□□□ -1.49
HMGB3P18-201ENST00000406327 PTPN7P35236 360 aa5.75□□□□□ -1.49
HMGB3P18-201ENST00000406327 HALP42357 657 aa5.75□□□□□ -1.49
HMGB3P18-201ENST00000406327 LIMS1P48059 325 aa5.75□□□□□ -1.49
HMGB3P18-201ENST00000406327 EPHB3P54753 998 aa5.75□□□□□ -1.49
HMGB3P18-201ENST00000406327 GNAI1P63096 354 aa5.75□□□□□ -1.49
HMGB3P18-201ENST00000406327 ATP8B2P98198 1209 aa5.75□□□□□ -1.49
HMGB3P18-201ENST00000406327 ZNF543Q08ER8 600 aa5.75□□□□□ -1.49
HMGB3P18-201ENST00000406327 ADAM15Q13444 863 aa5.75□□□□□ -1.49
HMGB3P18-201ENST00000406327 SNAPC2Q13487 334 aa5.75□□□□□ -1.49
HMGB3P18-201ENST00000406327 MTM1Q13496 603 aa5.75□□□□□ -1.49
HMGB3P18-201ENST00000406327 FAM209BQ5JX69 171 aa5.75□□□□□ -1.49
HMGB3P18-201ENST00000406327 DACT2Q5SW24 774 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms