RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 SAYSD1Q9NPB0 183 aa10.21□□□□□ -0.78
SMC1B-202ENST00000404354 BATF3Q9NR55 127 aa10.21□□□□□ -0.78
SMC1B-202ENST00000404354 ZNF219Q9P2Y4 722 aaPredicted RBP10.21□□□□□ -0.78
SMC1B-202ENST00000404354 POLLQ9UGP5 575 aa10.21□□□□□ -0.78
SMC1B-202ENST00000404354 DLEC1Q9Y238 1755 aa10.2□□□□□ -0.78
SMC1B-202ENST00000404354 KIAA1551Q9HCM1 1747 aa10.2□□□□□ -0.78
SMC1B-202ENST00000404354 A0A0G2JND7 137 aa10.2□□□□□ -0.78
SMC1B-202ENST00000404354 EXOC1LA0A1B0GW35 172 aa10.2□□□□□ -0.78
SMC1B-202ENST00000404354 A0A1W2PPM1 405 aa10.2□□□□□ -0.78
SMC1B-202ENST00000404354 CFAP69A5D8W1 941 aa10.2□□□□□ -0.78
SMC1B-202ENST00000404354 NEFHP12036 1026 aa10.2□□□□□ -0.78
SMC1B-202ENST00000404354 KRT10P13645 584 aa10.2□□□□□ -0.78
SMC1B-202ENST00000404354 PTDSS1P48651 473 aaKnown RBP10.2□□□□□ -0.78
SMC1B-202ENST00000404354 DRG2P55039 364 aaKnown RBP10.2□□□□□ -0.78
SMC1B-202ENST00000404354 INHBEP58166 350 aa10.2□□□□□ -0.78
SMC1B-202ENST00000404354 SIX1Q15475 284 aaPredicted RBP10.2□□□□□ -0.78
SMC1B-202ENST00000404354 PPP2R5EQ16537 467 aa10.2□□□□□ -0.78
SMC1B-202ENST00000404354 TAF1BQ53T94 588 aaPredicted RBP10.2□□□□□ -0.78
SMC1B-202ENST00000404354 SLC10A5Q5PT55 438 aa10.2□□□□□ -0.78
SMC1B-202ENST00000404354 CDCA2Q69YH5 1023 aaPredicted RBP10.2□□□□□ -0.78
SMC1B-202ENST00000404354 ARHGEF18Q6ZSZ5 1173 aa10.2□□□□□ -0.78
SMC1B-202ENST00000404354 ZNF365Q70YC5 407 aa10.2□□□□□ -0.78
SMC1B-202ENST00000404354 ASRGL1Q7L266 308 aa10.2□□□□□ -0.78
SMC1B-202ENST00000404354 ZNF720Q7Z2F6 126 aa10.2□□□□□ -0.78
SMC1B-202ENST00000404354 MTDHQ86UE4 582 aaKnown RBP10.2□□□□□ -0.78
SMC1B-202ENST00000404354 TSC22D3Q99576 134 aa10.2□□□□□ -0.78
SMC1B-202ENST00000404354 GPRC5CQ9NQ84 441 aa10.2□□□□□ -0.78
SMC1B-202ENST00000404354 GGA1Q9UJY5 639 aa10.2□□□□□ -0.78
SMC1B-202ENST00000404354 SMCHD1A6NHR9 2005 aa10.2□□□□□ -0.78
SMC1B-202ENST00000404354 MIF4GDA9UHW6 222 aaKnown RBP10.2□□□□□ -0.78
SMC1B-202ENST00000404354 PEX11AO75192 247 aa10.2□□□□□ -0.78
SMC1B-202ENST00000404354 EYA4O95677 639 aa10.2□□□□□ -0.78
SMC1B-202ENST00000404354 RALAP11233 206 aa10.2□□□□□ -0.78
SMC1B-202ENST00000404354 MAPK4P31152 587 aa10.2□□□□□ -0.78
SMC1B-202ENST00000404354 GBP1P32455 592 aa10.2□□□□□ -0.78
SMC1B-202ENST00000404354 RPA3P35244 121 aaPredicted RBP10.2□□□□□ -0.78
SMC1B-202ENST00000404354 NOP14P78316 857 aaKnown RBP10.2□□□□□ -0.78
SMC1B-202ENST00000404354 MDH1BQ5I0G3 518 aa10.2□□□□□ -0.78
SMC1B-202ENST00000404354 BTNL9Q6UXG8 535 aa10.2□□□□□ -0.78
SMC1B-202ENST00000404354 CNBD1Q8NA66 436 aa10.2□□□□□ -0.78
SMC1B-202ENST00000404354 ZNF526Q8TF50 670 aaPredicted RBP10.2□□□□□ -0.78
SMC1B-202ENST00000404354 SYT11Q9BT88 431 aa10.2□□□□□ -0.78
SMC1B-202ENST00000404354 TMEM117Q9H0C3 514 aa10.2□□□□□ -0.78
SMC1B-202ENST00000404354 DENND2DQ9H6A0 471 aaPredicted RBP10.2□□□□□ -0.78
SMC1B-202ENST00000404354 GRID1Q9ULK0 1009 aa10.2□□□□□ -0.78
SMC1B-202ENST00000404354 A0A1B0GVG6 124 aa10.2□□□□□ -0.78
SMC1B-202ENST00000404354 SLC16A3O15427 465 aaKnown RBP10.2□□□□□ -0.78
SMC1B-202ENST00000404354 CYP3A4P08684 503 aa10.2□□□□□ -0.78
SMC1B-202ENST00000404354 SNHG28P0DPA3 235 aa10.2□□□□□ -0.78
SMC1B-202ENST00000404354 ALADP13716 330 aa10.2□□□□□ -0.78
SMC1B-202ENST00000404354 SMARCA1P28370 1054 aa10.2□□□□□ -0.78
SMC1B-202ENST00000404354 KHDC1Q4VXA5 237 aaKnown RBP10.2□□□□□ -0.78
SMC1B-202ENST00000404354 TMEM63BQ5T3F8 832 aa10.2□□□□□ -0.78
SMC1B-202ENST00000404354 FBXO11Q86XK2 927 aa10.2□□□□□ -0.78
SMC1B-202ENST00000404354 PLEKHO2Q8TD55 490 aa10.2□□□□□ -0.78
SMC1B-202ENST00000404354 EPS8L1Q8TE68 723 aa10.2□□□□□ -0.78
SMC1B-202ENST00000404354 RBM15Q96T37 977 aaKnown RBP eCLIP10.2□□□□□ -0.78
SMC1B-202ENST00000404354 KAT6AQ92794 2004 aa10.2□□□□□ -0.78
SMC1B-202ENST00000404354 GAS7O60861 476 aa10.19□□□□□ -0.78
SMC1B-202ENST00000404354 IL9RQ01113 521 aa10.19□□□□□ -0.78
SMC1B-202ENST00000404354 PLCB3Q01970 1234 aa10.19□□□□□ -0.78
SMC1B-202ENST00000404354 GRAPQ13588 217 aa10.19□□□□□ -0.78
SMC1B-202ENST00000404354 MTFR1Q15390 333 aa10.19□□□□□ -0.78
SMC1B-202ENST00000404354 GPATCH4Q5T3I0 446 aaKnown RBP10.19□□□□□ -0.78
SMC1B-202ENST00000404354 IZUMO3Q5VZ72 239 aa10.19□□□□□ -0.78
SMC1B-202ENST00000404354 ISLR2Q6UXK2 745 aa10.19□□□□□ -0.78
SMC1B-202ENST00000404354 DSTYKQ6XUX3 929 aa10.19□□□□□ -0.78
SMC1B-202ENST00000404354 GBP7Q8N8V2 638 aaPredicted RBP10.19□□□□□ -0.78
SMC1B-202ENST00000404354 GRAPLQ8TC17 118 aaPredicted RBP10.19□□□□□ -0.78
SMC1B-202ENST00000404354 PRR11Q96HE9 360 aaPredicted RBP10.19□□□□□ -0.78
SMC1B-202ENST00000404354 SERPINB12Q96P63 405 aa10.19□□□□□ -0.78
SMC1B-202ENST00000404354 RNPEPL1Q9HAU8 725 aa10.19□□□□□ -0.78
SMC1B-202ENST00000404354 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.19□□□□□ -0.78
SMC1B-202ENST00000404354 DIS3Q9Y2L1 958 aaKnown RBP10.19□□□□□ -0.78
SMC1B-202ENST00000404354 NUMBLQ9Y6R0 609 aa10.19□□□□□ -0.78
SMC1B-202ENST00000404354 NHSL1Q5SYE7 1610 aa10.19□□□□□ -0.78
SMC1B-202ENST00000404354 ROBO1Q9Y6N7 1651 aa10.19□□□□□ -0.78
SMC1B-202ENST00000404354 G3V3G9 751 aa10.19□□□□□ -0.78
SMC1B-202ENST00000404354 hCG_1984214I3L0E3 225 aa10.19□□□□□ -0.78
SMC1B-202ENST00000404354 ATF7P17544 494 aaPredicted RBP10.19□□□□□ -0.78
SMC1B-202ENST00000404354 CALB2P22676 271 aa10.19□□□□□ -0.78
SMC1B-202ENST00000404354 PIK3CAP42336 1068 aa10.19□□□□□ -0.78
SMC1B-202ENST00000404354 VAMP7P51809 220 aa10.19□□□□□ -0.78
SMC1B-202ENST00000404354 STRN3Q13033 797 aa10.19□□□□□ -0.78
SMC1B-202ENST00000404354 SLC1A5Q15758 541 aa10.19□□□□□ -0.78
SMC1B-202ENST00000404354 P3H1Q32P28 736 aa10.19□□□□□ -0.78
SMC1B-202ENST00000404354 DCAF8Q5TAQ9 597 aa10.19□□□□□ -0.78
SMC1B-202ENST00000404354 C1orf186Q6ZWK4 172 aa10.19□□□□□ -0.78
SMC1B-202ENST00000404354 TRMT10CQ7L0Y3 403 aaKnown RBP10.19□□□□□ -0.78
SMC1B-202ENST00000404354 CBWD2Q8IUF1 395 aa10.19□□□□□ -0.78
SMC1B-202ENST00000404354 SCYL3Q8IZE3 742 aa10.19□□□□□ -0.78
SMC1B-202ENST00000404354 ZNF713Q8N859 430 aaPredicted RBP10.19□□□□□ -0.78
SMC1B-202ENST00000404354 TEKT4Q8WW24 435 aa10.19□□□□□ -0.78
SMC1B-202ENST00000404354 SEMA4DQ92854 862 aa10.19□□□□□ -0.78
SMC1B-202ENST00000404354 SNF8Q96H20 258 aa10.19□□□□□ -0.78
SMC1B-202ENST00000404354 KREMEN1Q96MU8 473 aa10.19□□□□□ -0.78
SMC1B-202ENST00000404354 WDR18Q9BV38 432 aa10.19□□□□□ -0.78
SMC1B-202ENST00000404354 CCDC134Q9H6E4 229 aa10.19□□□□□ -0.78
SMC1B-202ENST00000404354 PRKAG3Q9UGI9 489 aa10.19□□□□□ -0.78
SMC1B-202ENST00000404354 LRRD1A4D1F6 860 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms