RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 TRAPPC12Q8WVT3 735 aa4.26□□□□□ -1.73
CLHC1-201ENST00000401408 SGCDQ92629 289 aa4.26□□□□□ -1.73
CLHC1-201ENST00000401408 CCDC43Q96MW1 224 aaKnown RBP4.26□□□□□ -1.73
CLHC1-201ENST00000401408 UNKQ9C0B0 810 aaKnown RBP4.26□□□□□ -1.73
CLHC1-201ENST00000401408 MRPL46Q9H2W6 279 aaKnown RBP4.26□□□□□ -1.73
CLHC1-201ENST00000401408 CLSTN2Q9H4D0 955 aa4.26□□□□□ -1.73
CLHC1-201ENST00000401408 SENP2Q9HC62 589 aa4.26□□□□□ -1.73
CLHC1-201ENST00000401408 ATP13A1Q9HD20 1204 aa4.26□□□□□ -1.73
CLHC1-201ENST00000401408 VTA1Q9NP79 307 aa4.26□□□□□ -1.73
CLHC1-201ENST00000401408 INCENPQ9NQS7 918 aa4.26□□□□□ -1.73
CLHC1-201ENST00000401408 KRT84Q9NSB2 600 aa4.26□□□□□ -1.73
CLHC1-201ENST00000401408 MARK1Q9P0L2 795 aa4.26□□□□□ -1.73
CLHC1-201ENST00000401408 TBC1D14Q9P2M4 693 aa4.26□□□□□ -1.73
CLHC1-201ENST00000401408 ORC3Q9UBD5 711 aaPredicted RBP4.26□□□□□ -1.73
CLHC1-201ENST00000401408 CHORDC1Q9UHD1 332 aaPredicted RBP4.26□□□□□ -1.73
CLHC1-201ENST00000401408 ADGRE2Q9UHX3 823 aa4.26□□□□□ -1.73
CLHC1-201ENST00000401408 EVC2Q86UK5 1308 aa4.26□□□□□ -1.73
CLHC1-201ENST00000401408 KIAA0100Q14667 2235 aaKnown RBP4.25□□□□□ -1.73
CLHC1-201ENST00000401408 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 A0A0B4J269 797 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 CTAGE9A4FU28 777 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 CCDC169A6NNP5 214 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 DDX39AO00148 427 aaKnown RBP4.25□□□□□ -1.73
CLHC1-201ENST00000401408 IKBKBO14920 756 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 NCK2O43639 380 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 OPA1O60313 960 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 GADD45BO75293 160 aaPredicted RBP4.25□□□□□ -1.73
CLHC1-201ENST00000401408 FBXO24O75426 580 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 F12P00748 615 aaPredicted RBP4.25□□□□□ -1.73
CLHC1-201ENST00000401408 HRGP04196 525 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 PSAPP07602 524 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 JMJD7P0C870 316 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 SRGAP2BP0DMP2 458 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 RLBP1P12271 317 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 TRIM21P19474 475 aaKnown RBP4.25□□□□□ -1.73
CLHC1-201ENST00000401408 MC4RP32245 332 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 ETV1P50549 477 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 AFF3P51826 1226 aaKnown RBP4.25□□□□□ -1.73
CLHC1-201ENST00000401408 FUT2Q10981 343 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 KCNMA1Q12791 1236 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 TRAF1Q13077 416 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 KLF1Q13351 362 aaPredicted RBP4.25□□□□□ -1.73
CLHC1-201ENST00000401408 NEDD9Q14511 834 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 COG2Q14746 738 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 CEP135Q66GS9 1140 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 TTC19Q6DKK2 380 aaPredicted RBP4.25□□□□□ -1.73
CLHC1-201ENST00000401408 CYP4F22Q6NT55 531 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 IL27RAQ6UWB1 636 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 LMBR1LQ6UX01 489 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 ZNF783Q6ZMS7 281 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 DPP9Q86TI2 863 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 LRRTM4Q86VH4 590 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 RAB11FIP4Q86YS3 637 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 SLC7A5P1Q8MH63 180 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 CNTROBQ8N137 903 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 BBOF1Q8ND07 529 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 C1orf162Q8NEQ5 155 aaPredicted RBP4.25□□□□□ -1.73
CLHC1-201ENST00000401408 OR2W6PQ8NHA6 318 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 GPR152Q8TDT2 470 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 NANOS1Q8WY41 292 aaKnown RBP4.25□□□□□ -1.73
CLHC1-201ENST00000401408 ZBTB9Q96C00 473 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 GIMAP5Q96F15 307 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 NRBF2Q96F24 287 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 C8orf76Q96K31 380 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 BHMT2Q9H2M3 363 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 TBCCD1Q9NVR7 557 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 ETAA1Q9NY74 926 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 STK39Q9UEW8 545 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 FOXD3Q9UJU5 478 aaPredicted RBP4.25□□□□□ -1.73
CLHC1-201ENST00000401408 RIMKLBQ9ULI2 386 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 ZNRF3Q9ULT6 936 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 ADAMTS8Q9UP79 889 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 SSX2IPQ9Y2D8 614 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 TLL2Q9Y6L7 1015 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 AKAP11Q9UKA4 1901 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 SNED1Q8TER0 1413 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 TTC28Q96AY4 2481 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 A0A1W2PQH9 124 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 UPK3BL1B0FP48 263 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 UPK3BL2E5RIL1 263 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 KCNH1O95259 989 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 YEATS4O95619 227 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 C6orf222P0C671 652 aaPredicted RBP4.25□□□□□ -1.73
CLHC1-201ENST00000401408 SCG2P13521 617 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 PAMP19021 973 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 HOXD13P35453 343 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 PIK3CBP42338 1070 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 GTF2A1P52655 376 aaPredicted RBP4.25□□□□□ -1.73
CLHC1-201ENST00000401408 RNASE9P60153 205 aaKnown RBP4.25□□□□□ -1.73
CLHC1-201ENST00000401408 BEX3Q00994 111 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 ITIH3Q06033 890 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 GALNT1Q10472 559 aaPredicted RBP4.25□□□□□ -1.73
CLHC1-201ENST00000401408 BNIP1Q12981 228 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 SUPT20HL1Q3ZLR7 823 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 BOLA3Q53S33 107 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 C1orf141Q5JVX7 400 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 METTL11BQ5VVY1 283 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 MCTP2Q6DN12 878 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 ARHGAP11AQ6P4F7 1023 aa4.25□□□□□ -1.73
CLHC1-201ENST00000401408 LBX2Q6XYB7 198 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms