RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 DYDC2Q96IM9 177 aa18.21■□□□□ 0.51
PTPRA-205ENST00000399903 PCMTD2Q9NV79 361 aa18.21■□□□□ 0.51
PTPRA-205ENST00000399903 PHTF1Q9UMS5 762 aa18.21■□□□□ 0.51
PTPRA-205ENST00000399903 PLSCR1O15162 318 aa18.21■□□□□ 0.51
PTPRA-205ENST00000399903 ECEL1O95672 775 aa18.21■□□□□ 0.51
PTPRA-205ENST00000399903 PYGMP11217 842 aa18.21■□□□□ 0.51
PTPRA-205ENST00000399903 STRN3Q13033 797 aa18.21■□□□□ 0.51
PTPRA-205ENST00000399903 TAF1BQ53T94 588 aaPredicted RBP18.21■□□□□ 0.51
PTPRA-205ENST00000399903 HHIPL2Q6UWX4 724 aa18.21■□□□□ 0.51
PTPRA-205ENST00000399903 BTNL9Q6UXG8 535 aa18.21■□□□□ 0.51
PTPRA-205ENST00000399903 SCG3Q8WXD2 468 aaKnown RBP18.21■□□□□ 0.51
PTPRA-205ENST00000399903 KCTD10Q9H3F6 313 aa18.21■□□□□ 0.51
PTPRA-205ENST00000399903 ZNF277Q9NRM2 450 aaPredicted RBP18.21■□□□□ 0.51
PTPRA-205ENST00000399903 PITPNM2Q9BZ72 1349 aa18.21■□□□□ 0.51
PTPRA-205ENST00000399903 KRT36O76013 467 aa18.21■□□□□ 0.51
PTPRA-205ENST00000399903 KRT15P19012 456 aa18.21■□□□□ 0.51
PTPRA-205ENST00000399903 ECE1P42892 770 aa18.21■□□□□ 0.51
PTPRA-205ENST00000399903 AGGF1Q8N302 714 aaeCLIP18.21■□□□□ 0.51
PTPRA-205ENST00000399903 ASAP3Q8TDY4 903 aa18.21■□□□□ 0.51
PTPRA-205ENST00000399903 RSPH10B2B2RC85 870 aa18.2■□□□□ 0.5
PTPRA-205ENST00000399903 RSPH10BP0C881 870 aa18.2■□□□□ 0.5
PTPRA-205ENST00000399903 LMNB1P20700 586 aa18.2■□□□□ 0.5
PTPRA-205ENST00000399903 COMTP21964 271 aa18.2■□□□□ 0.5
PTPRA-205ENST00000399903 ADCY8P40145 1251 aa18.2■□□□□ 0.5
PTPRA-205ENST00000399903 RASSF2P50749 326 aa18.2■□□□□ 0.5
PTPRA-205ENST00000399903 CYP2J2P51589 502 aa18.2■□□□□ 0.5
PTPRA-205ENST00000399903 POLGP54098 1239 aaPredicted RBP18.2■□□□□ 0.5
PTPRA-205ENST00000399903 UBXN2AP68543 259 aa18.2■□□□□ 0.5
PTPRA-205ENST00000399903 KRT17Q04695 432 aa18.2■□□□□ 0.5
PTPRA-205ENST00000399903 OVGP1Q12889 678 aa18.2■□□□□ 0.5
PTPRA-205ENST00000399903 MTFR1Q15390 333 aa18.2■□□□□ 0.5
PTPRA-205ENST00000399903 ARHGAP27Q6ZUM4 889 aa18.2■□□□□ 0.5
PTPRA-205ENST00000399903 SIAH1Q8IUQ4 282 aa18.2■□□□□ 0.5
PTPRA-205ENST00000399903 SYCP3Q8IZU3 236 aa18.2■□□□□ 0.5
PTPRA-205ENST00000399903 CSRNP1Q96S65 589 aa18.2■□□□□ 0.5
PTPRA-205ENST00000399903 P2RX7Q99572 595 aaKnown RBP18.2■□□□□ 0.5
PTPRA-205ENST00000399903 ALG13Q9NP73 1137 aaKnown RBP18.2■□□□□ 0.5
PTPRA-205ENST00000399903 PPP1R1BQ9UD71 204 aaPredicted RBP18.2■□□□□ 0.5
PTPRA-205ENST00000399903 CAPN9O14815 690 aa18.2■□□□□ 0.5
PTPRA-205ENST00000399903 CLDN3O15551 220 aa18.2■□□□□ 0.5
PTPRA-205ENST00000399903 VCAM1P19320 739 aa18.2■□□□□ 0.5
PTPRA-205ENST00000399903 TAC1P20366 129 aa18.2■□□□□ 0.5
PTPRA-205ENST00000399903 SCNN1BP51168 640 aa18.2■□□□□ 0.5
PTPRA-205ENST00000399903 DEFB132Q7Z7B7 95 aa18.2■□□□□ 0.5
PTPRA-205ENST00000399903 RBBP8NLQ8NC74 664 aaPredicted RBP18.2■□□□□ 0.5
PTPRA-205ENST00000399903 SLC20A1Q8WUM9 679 aa18.2■□□□□ 0.5
PTPRA-205ENST00000399903 MCUR1Q96AQ8 359 aa18.2■□□□□ 0.5
PTPRA-205ENST00000399903 NPHS2Q9NP85 383 aa18.2■□□□□ 0.5
PTPRA-205ENST00000399903 UBN1Q9NPG3 1134 aa18.2■□□□□ 0.5
PTPRA-205ENST00000399903 NAALADL1Q9UQQ1 740 aa18.2■□□□□ 0.5
PTPRA-205ENST00000399903 CFAP69A5D8W1 941 aa18.2■□□□□ 0.5
PTPRA-205ENST00000399903 ZBTB5O15062 677 aa18.2■□□□□ 0.5
PTPRA-205ENST00000399903 NPTXRO95502 500 aa18.2■□□□□ 0.5
PTPRA-205ENST00000399903 FTLP02792 175 aaPredicted RBP18.2■□□□□ 0.5
PTPRA-205ENST00000399903 SKIP12755 728 aa18.2■□□□□ 0.5
PTPRA-205ENST00000399903 GJC1P36383 396 aa18.2■□□□□ 0.5
PTPRA-205ENST00000399903 COILP38432 576 aaPredicted RBP18.2■□□□□ 0.5
PTPRA-205ENST00000399903 FXR2P51116 673 aaKnown RBP eCLIP18.2■□□□□ 0.51e-6■■■□□ 16.4
PTPRA-205ENST00000399903 STMN2Q93045 179 aa18.2■□□□□ 0.5
PTPRA-205ENST00000399903 ZDHHC15Q96MV8 337 aa18.2■□□□□ 0.5
PTPRA-205ENST00000399903 STOML1Q9UBI4 398 aa18.2■□□□□ 0.5
PTPRA-205ENST00000399903 F5H6K3 240 aa18.19■□□□□ 0.5
PTPRA-205ENST00000399903 SMAPO00193 183 aa18.19■□□□□ 0.5
PTPRA-205ENST00000399903 NR3C1P04150 777 aa18.19■□□□□ 0.5
PTPRA-205ENST00000399903 SNHG28P0DPA3 235 aa18.19■□□□□ 0.5
PTPRA-205ENST00000399903 CCNB1P14635 433 aa18.19■□□□□ 0.5
PTPRA-205ENST00000399903 RXRBP28702 533 aa18.19■□□□□ 0.5
PTPRA-205ENST00000399903 SOX5P35711 763 aa18.19■□□□□ 0.5
PTPRA-205ENST00000399903 EPHA7Q15375 998 aa18.19■□□□□ 0.5
PTPRA-205ENST00000399903 DRAXINQ8NBI3 349 aaPredicted RBP18.19■□□□□ 0.5
PTPRA-205ENST00000399903 MAIP1Q8WWC4 291 aa18.19■□□□□ 0.5
PTPRA-205ENST00000399903 ITFG2Q969R8 447 aa18.19■□□□□ 0.5
PTPRA-205ENST00000399903 UBE2OQ9C0C9 1292 aaKnown RBP18.19■□□□□ 0.5
PTPRA-205ENST00000399903 ZFP69BQ9UJL9 534 aa18.19■□□□□ 0.5
PTPRA-205ENST00000399903 CETPP11597 493 aa18.19■□□□□ 0.5
PTPRA-205ENST00000399903 CYP11B2P19099 503 aa18.19■□□□□ 0.5
PTPRA-205ENST00000399903 CDR2Q01850 454 aa18.19■□□□□ 0.5
PTPRA-205ENST00000399903 ZBTB16Q05516 673 aa18.19■□□□□ 0.5
PTPRA-205ENST00000399903 DSTYKQ6XUX3 929 aa18.19■□□□□ 0.5
PTPRA-205ENST00000399903 VPS52Q8N1B4 723 aa18.19■□□□□ 0.5
PTPRA-205ENST00000399903 PPFIBP2Q8ND30 876 aa18.19■□□□□ 0.5
PTPRA-205ENST00000399903 SYNGAP1Q96PV0 1343 aa18.19■□□□□ 0.5
PTPRA-205ENST00000399903 CYTH2Q99418 400 aa18.19■□□□□ 0.5
PTPRA-205ENST00000399903 PI4KBQ9UBF8 816 aa18.19■□□□□ 0.5
PTPRA-205ENST00000399903 PRKAG3Q9UGI9 489 aa18.19■□□□□ 0.5
PTPRA-205ENST00000399903 SCN9AQ15858 1988 aa18.19■□□□□ 0.5
PTPRA-205ENST00000399903 TMEM253P0C7T8 217 aa18.18■□□□□ 0.5
PTPRA-205ENST00000399903 PYGBP11216 843 aa18.18■□□□□ 0.5
PTPRA-205ENST00000399903 PSMC6P62333 389 aa18.18■□□□□ 0.5
PTPRA-205ENST00000399903 KNOP1Q1ED39 458 aaKnown RBP18.18■□□□□ 0.5
PTPRA-205ENST00000399903 SLC5A9Q2M3M2 681 aa18.18■□□□□ 0.5
PTPRA-205ENST00000399903 SGO2Q562F6 1265 aa18.18■□□□□ 0.5
PTPRA-205ENST00000399903 SPDYCQ5MJ68 293 aa18.18■□□□□ 0.5
PTPRA-205ENST00000399903 STRIP1Q5VSL9 837 aa18.18■□□□□ 0.5
PTPRA-205ENST00000399903 RNF207Q6ZRF8 634 aa18.18■□□□□ 0.5
PTPRA-205ENST00000399903 MTDHQ86UE4 582 aaKnown RBP18.18■□□□□ 0.5
PTPRA-205ENST00000399903 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.18■□□□□ 0.53e-6■■■■■ 69.6
PTPRA-205ENST00000399903 MAGEB18Q96M61 343 aa18.18■□□□□ 0.5
PTPRA-205ENST00000399903 MOV10L1Q9BXT6 1211 aaKnown RBP18.18■□□□□ 0.5
PTPRA-205ENST00000399903 ABCB5Q2M3G0 1257 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms