RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 SUPT3HB4E1H0 165 aa12.97□□□□□ -0.33
CACNA1C-219ENST00000399649 CRKP46108 304 aa12.97□□□□□ -0.33
CACNA1C-219ENST00000399649 HNRNPH2P55795 449 aaKnown RBP12.97□□□□□ -0.33
CACNA1C-219ENST00000399649 LAMB3Q13751 1172 aa12.97□□□□□ -0.33
CACNA1C-219ENST00000399649 DRAP1Q14919 205 aaPredicted RBP12.97□□□□□ -0.33
CACNA1C-219ENST00000399649 FBXO38Q6PIJ6 1188 aa12.97□□□□□ -0.33
CACNA1C-219ENST00000399649 MRPL1Q9BYD6 325 aaKnown RBP12.97□□□□□ -0.33
CACNA1C-219ENST00000399649 KCNN4O15554 427 aa12.97□□□□□ -0.33
CACNA1C-219ENST00000399649 SSTR3P32745 418 aaPredicted RBP12.97□□□□□ -0.33
CACNA1C-219ENST00000399649 TMA16Q96EY4 203 aaKnown RBP12.97□□□□□ -0.33
CACNA1C-219ENST00000399649 PAPOLBQ9NRJ5 636 aaKnown RBP12.97□□□□□ -0.33
CACNA1C-219ENST00000399649 DHX34Q14147 1143 aaKnown RBP12.96□□□□□ -0.33
CACNA1C-219ENST00000399649 TRIP4Q15650 581 aaPredicted RBP12.96□□□□□ -0.33
CACNA1C-219ENST00000399649 FAM182BQ5T319 152 aa12.96□□□□□ -0.33
CACNA1C-219ENST00000399649 GABBR1Q9UBS5 961 aa12.96□□□□□ -0.33
CACNA1C-219ENST00000399649 BLOC1S6Q9UL45 172 aa12.96□□□□□ -0.33
CACNA1C-219ENST00000399649 LIFRP42702 1097 aa12.96□□□□□ -0.33
CACNA1C-219ENST00000399649 ARMC2Q8NEN0 867 aa12.96□□□□□ -0.33
CACNA1C-219ENST00000399649 CHAMP1Q96JM3 812 aa12.96□□□□□ -0.33
CACNA1C-219ENST00000399649 USE1Q9NZ43 259 aa12.96□□□□□ -0.33
CACNA1C-219ENST00000399649 PRG3Q9Y2Y8 225 aaPredicted RBP12.96□□□□□ -0.33
CACNA1C-219ENST00000399649 DTNAQ9Y4J8 743 aa12.96□□□□□ -0.33
CACNA1C-219ENST00000399649 POTEMA6NI47 508 aa12.96□□□□□ -0.33
CACNA1C-219ENST00000399649 NCK2O43639 380 aa12.96□□□□□ -0.33
CACNA1C-219ENST00000399649 ANKMY2Q8IV38 441 aa12.96□□□□□ -0.33
CACNA1C-219ENST00000399649 INSRP06213 1382 aa12.96□□□□□ -0.33
CACNA1C-219ENST00000399649 EIF4E1BA6NMX2 242 aaKnown RBP12.96□□□□□ -0.33
CACNA1C-219ENST00000399649 P4HBP07237 508 aaKnown RBP12.96□□□□□ -0.33
CACNA1C-219ENST00000399649 SOAT1P35610 550 aa12.96□□□□□ -0.33
CACNA1C-219ENST00000399649 DEFA1P59665 94 aa12.96□□□□□ -0.33
CACNA1C-219ENST00000399649 DEFA3P59666 94 aa12.96□□□□□ -0.33
CACNA1C-219ENST00000399649 SYDE1Q6ZW31 735 aaPredicted RBP12.96□□□□□ -0.33
CACNA1C-219ENST00000399649 TRIM69Q86WT6 500 aa12.96□□□□□ -0.33
CACNA1C-219ENST00000399649 OSBP2Q969R2 916 aa12.96□□□□□ -0.33
CACNA1C-219ENST00000399649 CMTM5Q96DZ9 223 aa12.96□□□□□ -0.33
CACNA1C-219ENST00000399649 MASTLQ96GX5 879 aa12.96□□□□□ -0.33
CACNA1C-219ENST00000399649 PRMT1Q99873 361 aaKnown RBP12.96□□□□□ -0.33
CACNA1C-219ENST00000399649 ARHGEF38Q9NXL2 777 aa12.96□□□□□ -0.33
CACNA1C-219ENST00000399649 RBAKQ9NYW8 714 aaPredicted RBP12.96□□□□□ -0.33
CACNA1C-219ENST00000399649 ZFATQ9P243 1243 aa12.96□□□□□ -0.33
CACNA1C-219ENST00000399649 PKP3Q9Y446 797 aa12.96□□□□□ -0.33
CACNA1C-219ENST00000399649 LRRIQ3A6PVS8 624 aaPredicted RBP12.96□□□□□ -0.34
CACNA1C-219ENST00000399649 FKBP9O95302 570 aa12.96□□□□□ -0.34
CACNA1C-219ENST00000399649 BRD2P25440 801 aaKnown RBP12.96□□□□□ -0.34
CACNA1C-219ENST00000399649 NKX1-1Q15270 411 aaPredicted RBP12.96□□□□□ -0.34
CACNA1C-219ENST00000399649 COBLL1Q53SF7 1204 aa12.96□□□□□ -0.34
CACNA1C-219ENST00000399649 NFRKBQ6P4R8 1299 aa12.96□□□□□ -0.34
CACNA1C-219ENST00000399649 FKBP9P1Q75LS8 142 aa12.96□□□□□ -0.34
CACNA1C-219ENST00000399649 PGBD3Q8N328 593 aa12.96□□□□□ -0.34
CACNA1C-219ENST00000399649 TNIP3Q96KP6 325 aa12.96□□□□□ -0.34
CACNA1C-219ENST00000399649 ATP6V1G3Q96LB4 118 aa12.96□□□□□ -0.34
CACNA1C-219ENST00000399649 FAM20AQ96MK3 541 aa12.96□□□□□ -0.34
CACNA1C-219ENST00000399649 CD274Q9NZQ7 290 aa12.96□□□□□ -0.34
CACNA1C-219ENST00000399649 CDYLQ9Y232 598 aa12.96□□□□□ -0.34
CACNA1C-219ENST00000399649 ABCA5Q8WWZ7 1642 aa12.96□□□□□ -0.34
CACNA1C-219ENST00000399649 MYO1CO00159 1063 aa12.96□□□□□ -0.34
CACNA1C-219ENST00000399649 STAT3P40763 770 aa12.96□□□□□ -0.34
CACNA1C-219ENST00000399649 GJC2Q5T442 439 aaPredicted RBP12.96□□□□□ -0.34
CACNA1C-219ENST00000399649 ARMC6Q6NXE6 501 aa12.96□□□□□ -0.34
CACNA1C-219ENST00000399649 C1orf54Q8WWF1 131 aa12.96□□□□□ -0.34
CACNA1C-219ENST00000399649 MYO3BQ8WXR4 1341 aa12.96□□□□□ -0.34
CACNA1C-219ENST00000399649 HES6Q96HZ4 224 aa12.96□□□□□ -0.34
CACNA1C-219ENST00000399649 ZBTB1Q9Y2K1 713 aa12.96□□□□□ -0.34
CACNA1C-219ENST00000399649 PFASO15067 1338 aa12.95□□□□□ -0.34
CACNA1C-219ENST00000399649 TOMM70O94826 608 aa12.95□□□□□ -0.34
CACNA1C-219ENST00000399649 NLRP11P59045 1033 aaKnown RBP12.95□□□□□ -0.34
CACNA1C-219ENST00000399649 E4F1Q66K89 784 aaPredicted RBP12.95□□□□□ -0.34
CACNA1C-219ENST00000399649 KIRREL3Q8IZU9 778 aa12.95□□□□□ -0.34
CACNA1C-219ENST00000399649 DMAP1Q9NPF5 467 aaPredicted RBP12.95□□□□□ -0.34
CACNA1C-219ENST00000399649 PIH1D3Q9NQM4 214 aaKnown RBP12.95□□□□□ -0.34
CACNA1C-219ENST00000399649 GEMIN8Q9NWZ8 242 aaKnown RBP12.95□□□□□ -0.34
CACNA1C-219ENST00000399649 QARSP47897 775 aaKnown RBP12.95□□□□□ -0.34
CACNA1C-219ENST00000399649 STAT4Q14765 748 aa12.95□□□□□ -0.34
CACNA1C-219ENST00000399649 SNX17Q15036 470 aa12.95□□□□□ -0.34
CACNA1C-219ENST00000399649 PFKFB3Q16875 520 aaPredicted RBP12.95□□□□□ -0.34
CACNA1C-219ENST00000399649 IYDQ6PHW0 289 aa12.95□□□□□ -0.34
CACNA1C-219ENST00000399649 LVRNQ6Q4G3 990 aa12.95□□□□□ -0.34
CACNA1C-219ENST00000399649 AGBL1Q96MI9 1066 aa12.95□□□□□ -0.34
CACNA1C-219ENST00000399649 BSDC1Q9NW68 430 aaPredicted RBP12.95□□□□□ -0.34
CACNA1C-219ENST00000399649 SCN3BQ9NY72 215 aa12.95□□□□□ -0.34
CACNA1C-219ENST00000399649 ZHX2Q9Y6X8 837 aa12.95□□□□□ -0.34
CACNA1C-219ENST00000399649 C3orf70A6NLC5 250 aaPredicted RBP12.95□□□□□ -0.34
CACNA1C-219ENST00000399649 NDUFS3O75489 264 aa12.95□□□□□ -0.34
CACNA1C-219ENST00000399649 PRCPP42785 496 aa12.95□□□□□ -0.34
CACNA1C-219ENST00000399649 ATPAF2Q8N5M1 289 aa12.95□□□□□ -0.34
CACNA1C-219ENST00000399649 TTLL6Q8N841 843 aa12.95□□□□□ -0.34
CACNA1C-219ENST00000399649 DNMT1P26358 1616 aaKnown RBP12.95□□□□□ -0.34
CACNA1C-219ENST00000399649 ERVV-1B6SEH8 477 aa12.95□□□□□ -0.34
CACNA1C-219ENST00000399649 SLC1A1P43005 524 aa12.95□□□□□ -0.34
CACNA1C-219ENST00000399649 ACTN3Q08043 901 aaPredicted RBP12.95□□□□□ -0.34
CACNA1C-219ENST00000399649 ARHGEF7Q14155 803 aa12.95□□□□□ -0.34
CACNA1C-219ENST00000399649 ZNF280CQ8ND82 737 aa12.95□□□□□ -0.34
CACNA1C-219ENST00000399649 DIS3LQ8TF46 1054 aaKnown RBP12.95□□□□□ -0.34
CACNA1C-219ENST00000399649 SMARCAD1Q9H4L7 1026 aa12.95□□□□□ -0.34
CACNA1C-219ENST00000399649 KRCC1Q9NPI7 259 aaPredicted RBP12.95□□□□□ -0.34
CACNA1C-219ENST00000399649 HPS4Q9NQG7 708 aa12.95□□□□□ -0.34
CACNA1C-219ENST00000399649 MLNP12872 115 aa12.95□□□□□ -0.34
CACNA1C-219ENST00000399649 GUCY1A3Q02108 690 aa12.95□□□□□ -0.34
CACNA1C-219ENST00000399649 TRAF7Q6Q0C0 670 aa12.95□□□□□ -0.34
CACNA1C-219ENST00000399649 ZNF579Q8NAF0 562 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms