RNA–Protein interactions for RNA: ENST00000399591.5

CACNA1C-205, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-205ENST00000399591 E2F8A0AVK6 867 aa11.8□□□□□ -0.52
CACNA1C-205ENST00000399591 TRAPPC3O43617 180 aa11.8□□□□□ -0.52
CACNA1C-205ENST00000399591 HOXB7P09629 217 aa11.8□□□□□ -0.52
CACNA1C-205ENST00000399591 NCALDP61601 193 aa11.8□□□□□ -0.52
CACNA1C-205ENST00000399591 RPS7P62081 194 aaKnown RBP11.8□□□□□ -0.52
CACNA1C-205ENST00000399591 SYCP2LQ5T4T6 812 aa11.8□□□□□ -0.52
CACNA1C-205ENST00000399591 TBC1D9BQ66K14 1250 aa11.8□□□□□ -0.52
CACNA1C-205ENST00000399591 KRT39Q6A163 491 aa11.8□□□□□ -0.52
CACNA1C-205ENST00000399591 GLT1D1Q96MS3 346 aa11.8□□□□□ -0.52
CACNA1C-205ENST00000399591 PRMT1Q99873 361 aaKnown RBP11.8□□□□□ -0.52
CACNA1C-205ENST00000399591 RNF14Q9UBS8 474 aa11.8□□□□□ -0.52
CACNA1C-205ENST00000399591 POLG2Q9UHN1 485 aa11.8□□□□□ -0.52
CACNA1C-205ENST00000399591 PNMA8BQ9ULN7 279 aaPredicted RBP11.8□□□□□ -0.52
CACNA1C-205ENST00000399591 FAM50BQ9Y247 325 aa11.8□□□□□ -0.52
CACNA1C-205ENST00000399591 PCF11O94913 1555 aaKnown RBP11.8□□□□□ -0.52
CACNA1C-205ENST00000399591 NEURL1BA8MQ27 555 aa11.8□□□□□ -0.52
CACNA1C-205ENST00000399591 AREL1O15033 823 aa11.8□□□□□ -0.52
CACNA1C-205ENST00000399591 LRRN2O75325 713 aa11.8□□□□□ -0.52
CACNA1C-205ENST00000399591 PMS2P54278 862 aa11.8□□□□□ -0.52
CACNA1C-205ENST00000399591 NR1H3Q13133 447 aa11.8□□□□□ -0.52
CACNA1C-205ENST00000399591 KRR1Q13601 381 aaKnown RBP11.8□□□□□ -0.52
CACNA1C-205ENST00000399591 BEST2Q8NFU1 509 aa11.8□□□□□ -0.52
CACNA1C-205ENST00000399591 PLEKHA8Q96JA3 519 aa11.8□□□□□ -0.52
CACNA1C-205ENST00000399591 STN1Q9H668 368 aaKnown RBP11.8□□□□□ -0.52
CACNA1C-205ENST00000399591 SEC31BQ9NQW1 1179 aa11.8□□□□□ -0.52
CACNA1C-205ENST00000399591 DLGAP2Q9P1A6 1054 aa11.8□□□□□ -0.52
CACNA1C-205ENST00000399591 KRT37O76014 449 aa11.8□□□□□ -0.52
CACNA1C-205ENST00000399591 CTCFP49711 727 aaPredicted RBP11.8□□□□□ -0.52
CACNA1C-205ENST00000399591 CCDC60Q8IWA6 550 aaPredicted RBP11.8□□□□□ -0.52
CACNA1C-205ENST00000399591 OR8H2Q8N162 312 aa11.8□□□□□ -0.52
CACNA1C-205ENST00000399591 MIER2Q8N344 545 aa11.8□□□□□ -0.52
CACNA1C-205ENST00000399591 GAS2L1Q99501 681 aaPredicted RBP11.8□□□□□ -0.52
CACNA1C-205ENST00000399591 TRIM17Q9Y577 477 aa11.8□□□□□ -0.52
CACNA1C-205ENST00000399591 USP17L15C9J2P7 530 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 USP17L13C9JLJ4 530 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 USP17L11C9JVI0 530 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 USP17L18D6R9N7 530 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 USP17L22D6RA61 530 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 USP17L17D6RBQ6 530 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 USP17L19D6RCP7 530 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 USP17L20D6RJB6 530 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 RALAP11233 206 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 CACNB1Q02641 598 aaPredicted RBP11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 TNFAIP2Q03169 654 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 USP17L24Q0WX57 530 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 MEI1Q5TIA1 1274 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 PGBD2Q6P3X8 592 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 IFNL3Q8IZI9 196 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 PGBD4Q96DM1 585 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 ACCSQ96QU6 501 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 UBE2OQ9C0C9 1292 aaKnown RBP11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 DKK3Q9UBP4 350 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 ZC3H4Q9UPT8 1303 aaKnown RBP11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 BIRC5O15392 142 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 DYNC1LI2O43237 492 aaPredicted RBP11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 PAPOLAP51003 745 aaKnown RBP11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 SURF1Q15526 300 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 MIIPQ5JXC2 388 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 FAM83BQ5T0W9 1011 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 APOA5Q6Q788 366 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 UTS2BQ765I0 119 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 DIS3LQ8TF46 1054 aaKnown RBP11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 CLIC6Q96NY7 704 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 DCTPP1Q9H773 170 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 ADCY9O60503 1353 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 ATP10BO94823 1461 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 GFPT2O94808 682 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 SOX6P35712 828 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 EMBQ6PCB8 327 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 SCG3Q8WXD2 468 aaKnown RBP11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 DNAJC9Q8WXX5 260 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 L3MBTL3Q96JM7 780 aaPredicted RBP11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 ZNF556Q9HAH1 456 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 SCN3BQ9NY72 215 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 STK17AQ9UEE5 414 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 TNNQ9UQP3 1299 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 SH3BP1Q9Y3L3 701 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 ABCC2Q92887 1545 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 PCP4L1A6NKN8 68 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 SNPHO15079 494 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 CCDC22O60826 627 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 ZBED1O96006 694 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 KRT16P08779 473 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 CCNIQ14094 377 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 USP39Q53GS9 565 aaKnown RBP11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 SFR1Q86XK3 245 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 ARRDC4Q8NCT1 418 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 SPTLC3Q9NUV7 552 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 MRGBPQ9NV56 204 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 PRAMEF22A3QJZ6 481 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 AP3B1O00203 1094 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 RNF103O00237 685 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 MAPRE2Q15555 327 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 KIZQ2M2Z5 673 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 NAIF1Q69YI7 327 aaPredicted RBP11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 HTATIP2Q9BUP3 242 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 CCDC134Q9H6E4 229 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 FEM1BQ9UK73 627 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 BLOC1S6Q9UL45 172 aa11.79□□□□□ -0.52
CACNA1C-205ENST00000399591 ASNA1O43681 348 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms