RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 SLC44A5Q8NCS7 719 aa6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 SLC7A14Q8TBB6 771 aa6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 IGDCC4Q8TDY8 1250 aa6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 LPIN2Q92539 896 aa6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 SHISA4Q96DD7 197 aa6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 RBM14Q96PK6 669 aaKnown RBP6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 PIGSQ96S52 555 aa6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 TTPALQ9BTX7 342 aa6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 LIN28AQ9H9Z2 209 aaKnown RBP6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 ZNHIT6Q9NWK9 470 aaKnown RBP6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 C4BP0C0L5 1744 aa6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 COL4A1P02462 1669 aa6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 FLT1P17948 1338 aa6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 NUP188Q5SRE5 1749 aa6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 MYO5AQ9Y4I1 1855 aaKnown RBP6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 ZBTB14O43829 449 aa6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 CAMTA2O94983 1202 aa6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 ZBTB48P10074 688 aaPredicted RBP6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 ALDH1B1P30837 517 aa6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 PIK3CBP42338 1070 aa6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 FOXK2Q01167 660 aa6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 KLHL30Q0D2K2 578 aa6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 SGCGQ13326 291 aa6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 KLF1Q13351 362 aaPredicted RBP6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 BLMHQ13867 455 aa6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 GRIK5Q16478 980 aa6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 PKN1Q16512 942 aa6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 ANO4Q32M45 955 aa6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 C11orf91Q3C1V1 193 aa6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 TBC1D9BQ66K14 1250 aa6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 LBX2Q6XYB7 198 aa6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 PLA2G4DQ86XP0 818 aa6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 FOXP4Q8IVH2 680 aaPredicted RBP6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 TMEM102Q8N9M5 508 aaPredicted RBP6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 AVL9Q8NBF6 648 aa6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 LINC00116Q8NCU8 138 aa6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 CFAP36Q96G28 342 aa6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 COG8Q96MW5 612 aa6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 LLPHQ9BRT6 129 aaKnown RBP6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 DNAI2Q9GZS0 605 aa6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 TRPV5Q9NQA5 729 aa6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 EXOC1Q9NV70 894 aa6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 ZNF624Q9P2J8 865 aaPredicted RBP6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 PCDHB11Q9Y5F2 797 aa6.73□□□□□ -1.33
TRAPPC13-202ENST00000399438 PLSCR1O15162 318 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 FOXD2O60548 495 aaPredicted RBP6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 CYP1A2P05177 515 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 ZFYP08048 801 aaPredicted RBP6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 PTPREP23469 700 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 TNFSF4P23510 183 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 ATP5F1P24539 256 aaPredicted RBP6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 ARFIP1P53367 373 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 POSTNQ15063 836 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 TEAD4Q15561 434 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 OASLQ15646 514 aaKnown RBP6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 ZNF174Q15697 407 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 TRIM61Q5EBN2 209 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 GALNT7Q86SF2 657 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 ZNF34Q8IZ26 560 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 LRRC43Q8N309 656 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 DYNLL2Q96FJ2 89 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 UBAC1Q9BSL1 405 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 RNF38Q9H0F5 515 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 EPC1Q9H2F5 836 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 KIAA1468Q9P260 1216 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 LTBP3Q9NS15 1303 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 POLR2DO15514 142 aaKnown RBP6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 TFEBP19484 476 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 RTN1Q16799 776 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 CFAP100Q494V2 611 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 SPDYCQ5MJ68 293 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 XKR5Q6UX68 686 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 DENND1AQ8TEH3 1009 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 ZNF384Q8TF68 577 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 GPKOWQ92917 476 aaPredicted RBP eCLIP6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 DHX58Q96C10 678 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 EPSTI1Q96J88 318 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 ARHGAP9Q9BRR9 750 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 AGXT2Q9BYV1 514 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 CCNL1Q9UK58 526 aaPredicted RBP6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 RTCBQ9Y3I0 505 aaKnown RBP6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 KIF3AQ9Y496 699 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 CNTNAP4Q9C0A0 1308 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 TAF1P21675 1872 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 MYH14Q7Z406 1995 aaKnown RBP6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 GPR75-ASB3A0A0A6YYF3 556 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 USP1O94782 785 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 SERPINC1P01008 464 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 CLTBP09497 229 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 GOLGA8HP0CJ92 632 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 PCP11498 1178 aaKnown RBP6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 IL11P20809 199 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 HOXD13P35453 343 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 GALNT1Q10472 559 aaPredicted RBP6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 SSPNQ14714 243 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 TAF12Q16514 161 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 AKNAD1Q5T1N1 836 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 RAB12Q6IQ22 244 aa6.72□□□□□ -1.33
TRAPPC13-202ENST00000399438 PACS1Q6VY07 963 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms