RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 B3GNT6Q6ZMB0 384 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 SRRM1Q8IYB3 904 aaKnown RBP10.12□□□□□ -0.79
SMAD9-203ENST00000399275 MCUQ8NE86 351 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 CYGBQ8WWM9 190 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 LENG1Q96BZ8 264 aaPredicted RBP10.12□□□□□ -0.79
SMAD9-203ENST00000399275 EYA3Q99504 573 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 PHACTR1Q9C0D0 580 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 DCLRE1BQ9H816 532 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 ARHGEF3Q9NR81 526 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 EMILIN3Q9NT22 766 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 GCNT4Q9P109 453 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 KIF17Q9P2E2 1029 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 NOC2LQ9Y3T9 749 aaKnown RBP10.12□□□□□ -0.79
SMAD9-203ENST00000399275 HBS1LQ9Y450 684 aaKnown RBP10.12□□□□□ -0.79
SMAD9-203ENST00000399275 COMMD3-BMI1R4GMX3 469 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 ANKARQ7Z5J8 1434 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 IQANK1A0A1B0GTG1 560 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 IMPDH2P12268 514 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 SAT1P21673 171 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 MFAP3P55082 362 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 TPTE2Q6XPS3 522 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 MICALL2Q8IY33 904 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 ZNF555Q8NEP9 628 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 MYCBPAPQ8TBZ2 947 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 OXER1Q8TDS5 423 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 SNX24Q9Y343 169 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 PPRC1Q5VV67 1664 aaKnown RBP10.12□□□□□ -0.79
SMAD9-203ENST00000399275 WDR17Q8IZU2 1322 aa10.12□□□□□ -0.79
SMAD9-203ENST00000399275 A0A0G2JPF8 293 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 TCP11X1B4DZS4 312 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 HNRNPCL3B7ZW38 293 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 GFPT2O94808 682 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 HNRNPCL4P0DMR1 293 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 PLS3P13797 630 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 GCLCP48506 637 aaPredicted RBP10.11□□□□□ -0.79
SMAD9-203ENST00000399275 MORF4L2Q15014 288 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 FAM83BQ5T0W9 1011 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 C16orf62Q7Z3J2 963 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 PBXIP1Q96AQ6 731 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 MXD3Q9BW11 206 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 ISCUQ9H1K1 167 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 FAM153AQ9UHL3 310 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 TRIM33Q9UPN9 1127 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 HPSEQ9Y251 543 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 PRR36Q9H6K5 1346 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 SPDYE5A6NIY4 337 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 BACH1O14867 736 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 CLASP2O75122 1294 aaKnown RBP10.11□□□□□ -0.79
SMAD9-203ENST00000399275 BCL10O95999 233 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 NSFP46459 744 aaKnown RBP10.11□□□□□ -0.79
SMAD9-203ENST00000399275 MPP3Q13368 585 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 ITIH4Q14624 930 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 USF2Q15853 346 aaPredicted RBP10.11□□□□□ -0.79
SMAD9-203ENST00000399275 BBS9Q3SYG4 887 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 EPHA10Q5JZY3 1008 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 PRR23CQ6ZRP0 262 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 ADSSL1Q8N142 457 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 ERP27Q96DN0 273 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 PSTPIP2Q9H939 334 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 C8orf4Q9NR00 106 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 LCMT1Q9UIC8 334 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 PNMA2Q9UL42 364 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 KIAA1024Q9UPX6 916 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 CASP5P51878 434 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 IST1P53990 364 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 RPS6P62753 249 aaKnown RBP10.11□□□□□ -0.79
SMAD9-203ENST00000399275 BNIP1Q12981 228 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 MAPK11Q15759 364 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 PFKFB3Q16875 520 aaPredicted RBP10.11□□□□□ -0.79
SMAD9-203ENST00000399275 LCORLQ8N3X6 602 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 CAVIN3Q969G5 261 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 CNDP1Q96KN2 507 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 SPATA7Q9P0W8 599 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 DTNAQ9Y4J8 743 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 LMTK2Q8IWU2 1503 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 RGS5O15539 181 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 ASAP2O43150 1006 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 BCAMP50895 628 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 SEC24CP53992 1094 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 SNAP25P60880 206 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 NEK5Q6P3R8 708 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 TAF8Q7Z7C8 310 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 OR8H2Q8N162 312 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 RASGRP4Q8TDF6 673 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 EXOSC4Q9NPD3 245 aaKnown RBP10.11□□□□□ -0.79
SMAD9-203ENST00000399275 PIH1D3Q9NQM4 214 aaKnown RBP10.11□□□□□ -0.79
SMAD9-203ENST00000399275 MID2Q9UJV3 735 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 RBMX2Q9Y388 322 aaKnown RBP10.11□□□□□ -0.79
SMAD9-203ENST00000399275 UBE4BO95155 1302 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 AK9Q5TCS8 1911 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 PRAMEF22A3QJZ6 481 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 NOTOA8MTQ0 251 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 BTN3A3O00478 584 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 FOXP2O15409 715 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 FSBPO95073 299 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 CHN1P15882 459 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 MAGEA8P43361 318 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 KDSRQ06136 332 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 ITGADQ13349 1161 aa10.11□□□□□ -0.79
SMAD9-203ENST00000399275 PCNX4Q63HM2 1172 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms