RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 FOXR1Q6PIV2 292 aa14.85□□□□□ -0.03
PRAME-202ENST00000398743 KDM7AQ6ZMT4 941 aa14.85□□□□□ -0.03
PRAME-202ENST00000398743 SEPT14Q6ZU15 432 aa14.85□□□□□ -0.03
PRAME-202ENST00000398743 DEPTORQ8TB45 409 aa14.85□□□□□ -0.03
PRAME-202ENST00000398743 ATP8B4Q8TF62 1192 aa14.85□□□□□ -0.03
PRAME-202ENST00000398743 UBLCP1Q8WVY7 318 aaPredicted RBP14.85□□□□□ -0.03
PRAME-202ENST00000398743 ZNF516Q92618 1163 aa14.85□□□□□ -0.03
PRAME-202ENST00000398743 FMO2Q99518 471 aa14.85□□□□□ -0.03
PRAME-202ENST00000398743 TRIM31Q9BZY9 425 aa14.85□□□□□ -0.03
PRAME-202ENST00000398743 RASAL2Q9UJF2 1139 aa14.85□□□□□ -0.03
PRAME-202ENST00000398743 LOC285556D6RIA3 1793 aa14.85□□□□□ -0.03
PRAME-202ENST00000398743 LRRIQ4A6NIV6 560 aa14.85□□□□□ -0.03
PRAME-202ENST00000398743 GRIN3BO60391 1043 aa14.85□□□□□ -0.03
PRAME-202ENST00000398743 MYZAPP0CAP1 466 aa14.85□□□□□ -0.03
PRAME-202ENST00000398743 GLRA2P23416 452 aa14.85□□□□□ -0.03
PRAME-202ENST00000398743 CTNNA2P26232 953 aa14.85□□□□□ -0.03
PRAME-202ENST00000398743 FLT3P36888 993 aa14.85□□□□□ -0.03
PRAME-202ENST00000398743 ALDH5A1P51649 535 aaPredicted RBP14.85□□□□□ -0.03
PRAME-202ENST00000398743 NLRP11P59045 1033 aaKnown RBP14.85□□□□□ -0.03
PRAME-202ENST00000398743 ZACNQ401N2 412 aa14.85□□□□□ -0.03
PRAME-202ENST00000398743 DUPD1Q68J44 220 aa14.85□□□□□ -0.03
PRAME-202ENST00000398743 LBX2Q6XYB7 198 aa14.85□□□□□ -0.03
PRAME-202ENST00000398743 JAMLQ86YT9 394 aa14.85□□□□□ -0.03
PRAME-202ENST00000398743 BTBD6Q96KE9 485 aa14.85□□□□□ -0.03
PRAME-202ENST00000398743 CNOT8Q9UFF9 292 aaKnown RBP14.85□□□□□ -0.03
PRAME-202ENST00000398743 FBXO40Q9UH90 709 aa14.85□□□□□ -0.03
PRAME-202ENST00000398743 GRIN2DO15399 1336 aa14.85□□□□□ -0.03
PRAME-202ENST00000398743 H0YGN5 161 aa14.84□□□□□ -0.03
PRAME-202ENST00000398743 K7ERI5 159 aa14.84□□□□□ -0.03
PRAME-202ENST00000398743 ERLIN2O94905 339 aa14.84□□□□□ -0.03
PRAME-202ENST00000398743 PIGRP01833 764 aa14.84□□□□□ -0.03
PRAME-202ENST00000398743 NR1D1P20393 614 aa14.84□□□□□ -0.03
PRAME-202ENST00000398743 ACOT2P49753 483 aa14.84□□□□□ -0.03
PRAME-202ENST00000398743 HIRAP54198 1017 aaPredicted RBP14.84□□□□□ -0.03
PRAME-202ENST00000398743 FSTL1Q12841 308 aa14.84□□□□□ -0.03
PRAME-202ENST00000398743 LMBRD2Q68DH5 695 aaPredicted RBP14.84□□□□□ -0.03
PRAME-202ENST00000398743 SLFN12LQ6IEE8 588 aa14.84□□□□□ -0.03
PRAME-202ENST00000398743 ZNF677Q86XU0 584 aa14.84□□□□□ -0.03
PRAME-202ENST00000398743 GPC2Q8N158 579 aa14.84□□□□□ -0.03
PRAME-202ENST00000398743 ASAP3Q8TDY4 903 aa14.84□□□□□ -0.03
PRAME-202ENST00000398743 GLG1Q92896 1179 aa14.84□□□□□ -0.03
PRAME-202ENST00000398743 TMBIM4Q9HC24 238 aa14.84□□□□□ -0.03
PRAME-202ENST00000398743 PCDHA3Q9Y5H8 950 aa14.84□□□□□ -0.03
PRAME-202ENST00000398743 NFS1Q9Y697 457 aa14.84□□□□□ -0.03
PRAME-202ENST00000398743 SNCAIPQ9Y6H5 919 aa14.84□□□□□ -0.03
PRAME-202ENST00000398743 DOCK5Q9H7D0 1870 aa14.84□□□□□ -0.03
PRAME-202ENST00000398743 WDR81Q562E7 1941 aa14.84□□□□□ -0.03
PRAME-202ENST00000398743 IGKV6D-21A0A0A0MT36 114 aa14.84□□□□□ -0.03
PRAME-202ENST00000398743 USP2O75604 605 aaPredicted RBP14.84□□□□□ -0.03
PRAME-202ENST00000398743 LDHAP00338 332 aaKnown RBP14.84□□□□□ -0.03
PRAME-202ENST00000398743 PYGMP11217 842 aa14.84□□□□□ -0.03
PRAME-202ENST00000398743 UBA1P22314 1058 aaKnown RBP14.84□□□□□ -0.03
PRAME-202ENST00000398743 ARL2P36404 184 aa14.84□□□□□ -0.03
PRAME-202ENST00000398743 PIK3CAP42336 1068 aa14.84□□□□□ -0.03
PRAME-202ENST00000398743 ATP1A2P50993 1020 aa14.84□□□□□ -0.03
PRAME-202ENST00000398743 DHX9Q08211 1270 aaKnown RBP14.84□□□□□ -0.03
PRAME-202ENST00000398743 BIRC3Q13489 604 aa14.84□□□□□ -0.03
PRAME-202ENST00000398743 VGLL4Q14135 290 aa14.84□□□□□ -0.03
PRAME-202ENST00000398743 TREML2Q5T2D2 321 aa14.84□□□□□ -0.03
PRAME-202ENST00000398743 EMC10Q5UCC4 262 aa14.84□□□□□ -0.03
PRAME-202ENST00000398743 TDRD10Q5VZ19 366 aaKnown RBP14.84□□□□□ -0.03
PRAME-202ENST00000398743 PRELID2Q8N945 189 aa14.84□□□□□ -0.03
PRAME-202ENST00000398743 C18orf8Q96DM3 657 aa14.84□□□□□ -0.03
PRAME-202ENST00000398743 FAM84AQ96KN4 292 aa14.84□□□□□ -0.03
PRAME-202ENST00000398743 NIFKQ9BYG3 293 aaKnown RBP14.84□□□□□ -0.03
PRAME-202ENST00000398743 RBAKQ9NYW8 714 aaPredicted RBP14.84□□□□□ -0.03
PRAME-202ENST00000398743 RSPH14Q9UHP6 348 aa14.84□□□□□ -0.03
PRAME-202ENST00000398743 MTUS1Q9ULD2 1270 aa14.84□□□□□ -0.03
PRAME-202ENST00000398743 PCDHB2Q9Y5E7 798 aa14.84□□□□□ -0.03
PRAME-202ENST00000398743 HLA-DRAP01903 254 aa14.83□□□□□ -0.04
PRAME-202ENST00000398743 C4BPAP04003 597 aaKnown RBP14.83□□□□□ -0.04
PRAME-202ENST00000398743 UNGP13051 313 aaPredicted RBP14.83□□□□□ -0.04
PRAME-202ENST00000398743 DRG2P55039 364 aaKnown RBP14.83□□□□□ -0.04
PRAME-202ENST00000398743 RWDD2BP57060 319 aa14.83□□□□□ -0.04
PRAME-202ENST00000398743 BPIFB4P59827 614 aa14.83□□□□□ -0.04
PRAME-202ENST00000398743 ZNF844Q08AG5 666 aa14.83□□□□□ -0.04
PRAME-202ENST00000398743 RUFY4Q6ZNE9 571 aa14.83□□□□□ -0.04
PRAME-202ENST00000398743 SRLQ86TD4 932 aa14.83□□□□□ -0.04
PRAME-202ENST00000398743 EFCAB13Q8IY85 973 aa14.83□□□□□ -0.04
PRAME-202ENST00000398743 OR2W6PQ8NHA6 318 aa14.83□□□□□ -0.04
PRAME-202ENST00000398743 MAGOHBQ96A72 148 aaKnown RBP14.83□□□□□ -0.04
PRAME-202ENST00000398743 PCYOX1Q9UHG3 505 aa14.83□□□□□ -0.04
PRAME-202ENST00000398743 PODXLO00592 558 aa14.83□□□□□ -0.04
PRAME-202ENST00000398743 RFC5P40937 340 aa14.83□□□□□ -0.04
PRAME-202ENST00000398743 WNT7BP56706 349 aa14.83□□□□□ -0.04
PRAME-202ENST00000398743 PDCLQ13371 301 aa14.83□□□□□ -0.04
PRAME-202ENST00000398743 SPDYCQ5MJ68 293 aa14.83□□□□□ -0.04
PRAME-202ENST00000398743 TTC19Q6DKK2 380 aaPredicted RBP14.83□□□□□ -0.04
PRAME-202ENST00000398743 CCDC137Q6PK04 289 aaKnown RBP14.83□□□□□ -0.04
PRAME-202ENST00000398743 CRELD2Q6UXH1 353 aaPredicted RBP14.83□□□□□ -0.04
PRAME-202ENST00000398743 SLC13A5Q86YT5 568 aaPredicted RBP14.83□□□□□ -0.04
PRAME-202ENST00000398743 RIOX2Q8IUF8 465 aa14.83□□□□□ -0.04
PRAME-202ENST00000398743 BCAS4Q8TDM0 211 aa14.83□□□□□ -0.04
PRAME-202ENST00000398743 TRIM11Q96F44 468 aa14.83□□□□□ -0.04
PRAME-202ENST00000398743 CEP89Q96ST8 783 aa14.83□□□□□ -0.04
PRAME-202ENST00000398743 SGIP1Q9BQI5 828 aa14.83□□□□□ -0.04
PRAME-202ENST00000398743 MSTO1Q9BUK6 570 aa14.83□□□□□ -0.04
PRAME-202ENST00000398743 PLVAPQ9BX97 442 aa14.83□□□□□ -0.04
PRAME-202ENST00000398743 HAPLN2Q9GZV7 340 aa14.83□□□□□ -0.04
PRAME-202ENST00000398743 CENPHQ9H3R5 247 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms