RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 FAM133BQ5BKY9 247 aaKnown RBP15.08■□□□□ 0
PCDHGA11-201ENST00000398587 MMS22LQ6ZRQ5 1243 aa15.08■□□□□ 0
PCDHGA11-201ENST00000398587 CDKL3Q8IVW4 592 aaPredicted RBP15.08■□□□□ 0
PCDHGA11-201ENST00000398587 SCN4BQ8IWT1 228 aa15.08■□□□□ 0
PCDHGA11-201ENST00000398587 ZKSCAN4Q969J2 545 aaPredicted RBP15.08■□□□□ 0
PCDHGA11-201ENST00000398587 VPS39Q96JC1 886 aa15.08■□□□□ 0
PCDHGA11-201ENST00000398587 DHX35Q9H5Z1 703 aaKnown RBP15.08■□□□□ 0
PCDHGA11-201ENST00000398587 CAMTA1Q9Y6Y1 1673 aa15.08■□□□□ 0
PCDHGA11-201ENST00000398587 MAPK13O15264 365 aa15.08■□□□□ 0
PCDHGA11-201ENST00000398587 IL18RAPO95256 599 aa15.08■□□□□ 0
PCDHGA11-201ENST00000398587 ELF1P32519 619 aa15.08■□□□□ 0
PCDHGA11-201ENST00000398587 TMEM132DQ14C87 1099 aa15.08■□□□□ 0
PCDHGA11-201ENST00000398587 EFHC2Q5JST6 749 aa15.08■□□□□ 0
PCDHGA11-201ENST00000398587 SPOPLQ6IQ16 392 aa15.08■□□□□ 0
PCDHGA11-201ENST00000398587 APOBEC3HQ6NTF7 200 aaKnown RBP15.08■□□□□ 0
PCDHGA11-201ENST00000398587 C4orf50Q6ZRC1 276 aa15.08■□□□□ 0
PCDHGA11-201ENST00000398587 EPM2AIP1Q7L775 607 aaPredicted RBP15.08■□□□□ 0
PCDHGA11-201ENST00000398587 MMGT1Q8N4V1 131 aa15.08■□□□□ 0
PCDHGA11-201ENST00000398587 NOA1Q8NC60 698 aaKnown RBP15.08■□□□□ 0
PCDHGA11-201ENST00000398587 MCUQ8NE86 351 aa15.08■□□□□ 0
PCDHGA11-201ENST00000398587 SCFD1Q8WVM8 642 aa15.08■□□□□ 0
PCDHGA11-201ENST00000398587 GMNCA6NCL1 334 aa15.07■□□□□ 0
PCDHGA11-201ENST00000398587 PLEKP08567 350 aaPredicted RBP15.07■□□□□ 0
PCDHGA11-201ENST00000398587 SSTR3P32745 418 aaPredicted RBP15.07■□□□□ 0
PCDHGA11-201ENST00000398587 TGFB2P61812 414 aa15.07■□□□□ 0
PCDHGA11-201ENST00000398587 PDIA2Q13087 525 aaKnown RBP15.07■□□□□ 0
PCDHGA11-201ENST00000398587 MMEL1Q495T6 779 aa15.07■□□□□ 0
PCDHGA11-201ENST00000398587 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.07■□□□□ 0
PCDHGA11-201ENST00000398587 DDX23Q9BUQ8 820 aaKnown RBP15.07■□□□□ 0
PCDHGA11-201ENST00000398587 DYNC1LI2O43237 492 aaPredicted RBP15.07■□□□□ 0
PCDHGA11-201ENST00000398587 PON1P27169 355 aa15.07■□□□□ 0
PCDHGA11-201ENST00000398587 ATF7IP2Q5U623 682 aa15.07■□□□□ 0
PCDHGA11-201ENST00000398587 TTC1Q99614 292 aa15.07■□□□□ 0
PCDHGA11-201ENST00000398587 PIN4Q9Y237 131 aaKnown RBP15.07■□□□□ 0
PCDHGA11-201ENST00000398587 SNX9Q9Y5X1 595 aa15.07■□□□□ 0
PCDHGA11-201ENST00000398587 GAKO14976 1311 aa15.07■□□□□ 0
PCDHGA11-201ENST00000398587 CYTH3O43739 400 aa15.07■□□□□ 0
PCDHGA11-201ENST00000398587 DACT2Q5SW24 774 aa15.07■□□□□ 0
PCDHGA11-201ENST00000398587 HIBCHQ6NVY1 386 aaPredicted RBP15.07■□□□□ 0
PCDHGA11-201ENST00000398587 DEFB132Q7Z7B7 95 aa15.07■□□□□ 0
PCDHGA11-201ENST00000398587 PARK7Q99497 189 aaKnown RBP15.07■□□□□ 0
PCDHGA11-201ENST00000398587 ARSEP51690 589 aa15.07■□□□□ 0
PCDHGA11-201ENST00000398587 FKBP1AP62942 108 aaKnown RBP15.07■□□□□ 0
PCDHGA11-201ENST00000398587 DHX38Q92620 1227 aaKnown RBP15.07■□□□□ 0
PCDHGA11-201ENST00000398587 TTC17Q96AE7 1141 aa15.07■□□□□ 0
PCDHGA11-201ENST00000398587 NIF3L1Q9GZT8 377 aa15.07■□□□□ 0
PCDHGA11-201ENST00000398587 OLFML3Q9NRN5 406 aa15.07■□□□□ 0
PCDHGA11-201ENST00000398587 C3P01024 1663 aa15.06■□□□□ 0
PCDHGA11-201ENST00000398587 FAM237AA0A1B0GTK4 181 aa15.06■□□□□ 0
PCDHGA11-201ENST00000398587 COMTP21964 271 aa15.06■□□□□ 0
PCDHGA11-201ENST00000398587 PIGHQ14442 188 aaPredicted RBP15.06■□□□□ 0
PCDHGA11-201ENST00000398587 TAF1CQ15572 869 aaPredicted RBP15.06■□□□□ 0
PCDHGA11-201ENST00000398587 ZBED8Q8IZ13 594 aa15.06■□□□□ 0
PCDHGA11-201ENST00000398587 USP38Q8NB14 1042 aa15.06■□□□□ 0
PCDHGA11-201ENST00000398587 GPRC5AQ8NFJ5 357 aa15.06■□□□□ 0
PCDHGA11-201ENST00000398587 TRIM56Q9BRZ2 755 aaKnown RBP15.06■□□□□ 0
PCDHGA11-201ENST00000398587 GTF3C4Q9UKN8 822 aa15.06■□□□□ 0
PCDHGA11-201ENST00000398587 KDM4FA0A1W2PPD8 638 aa15.06■□□□□ 0
PCDHGA11-201ENST00000398587 STX1BP61266 288 aa15.06■□□□□ 0
PCDHGA11-201ENST00000398587 DBN1Q16643 649 aa15.06■□□□□ 0
PCDHGA11-201ENST00000398587 NBPF9Q3BBW0 867 aa15.06■□□□□ 0
PCDHGA11-201ENST00000398587 GJB7Q6PEY0 223 aa15.06■□□□□ 0
PCDHGA11-201ENST00000398587 LRRC31Q6UY01 552 aa15.06■□□□□ 0
PCDHGA11-201ENST00000398587 TRIM55Q9BYV6 548 aa15.06■□□□□ 0
PCDHGA11-201ENST00000398587 CARD9Q9H257 536 aa15.06■□□□□ 0
PCDHGA11-201ENST00000398587 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.06■□□□□ 0
PCDHGA11-201ENST00000398587 WTIPA6NIX2 430 aaPredicted RBP15.06■□□□□ 0
PCDHGA11-201ENST00000398587 H3BRJ5 948 aa15.06■□□□□ 0
PCDHGA11-201ENST00000398587 CREB3O43889 395 aa15.06■□□□□ 0
PCDHGA11-201ENST00000398587 CASP4P49662 377 aa15.06■□□□□ 0
PCDHGA11-201ENST00000398587 MYBPC2Q14324 1141 aa15.06■□□□□ 0
PCDHGA11-201ENST00000398587 TAF1BQ53T94 588 aaPredicted RBP15.06■□□□□ 0
PCDHGA11-201ENST00000398587 ZNF720Q7Z2F6 126 aa15.06■□□□□ 0
PCDHGA11-201ENST00000398587 PDCD2LQ9BRP1 358 aa15.06■□□□□ 0
PCDHGA11-201ENST00000398587 TRAIPQ9BWF2 469 aa15.06■□□□□ 0
PCDHGA11-201ENST00000398587 PI4K2BG5E9Z4 385 aa15.05■□□□□ 0
PCDHGA11-201ENST00000398587 S100BP04271 92 aaPredicted RBP15.05■□□□□ 0
PCDHGA11-201ENST00000398587 BYSLQ13895 437 aaKnown RBP15.05■□□□□ 0
PCDHGA11-201ENST00000398587 STAT4Q14765 748 aa15.05■□□□□ 0
PCDHGA11-201ENST00000398587 LRRC71Q8N4P6 559 aa15.05■□□□□ 0
PCDHGA11-201ENST00000398587 PPM1NQ8N819 430 aa15.05■□□□□ 0
PCDHGA11-201ENST00000398587 PDCD7Q8N8D1 485 aaKnown RBP15.05■□□□□ 0
PCDHGA11-201ENST00000398587 KIFC3Q9BVG8 833 aa15.05■□□□□ 0
PCDHGA11-201ENST00000398587 TMEM117Q9H0C3 514 aa15.05■□□□□ 0
PCDHGA11-201ENST00000398587 BFARQ9NZS9 450 aa15.05■□□□□ 0
PCDHGA11-201ENST00000398587 DCTN3O75935 186 aa15.05■□□□□ 0
PCDHGA11-201ENST00000398587 PDGFRAP16234 1089 aa15.05■□□□□ 0
PCDHGA11-201ENST00000398587 VCAM1P19320 739 aa15.05■□□□□ 0
PCDHGA11-201ENST00000398587 ITIH2P19823 946 aa15.05■□□□□ 0
PCDHGA11-201ENST00000398587 XPAP23025 273 aaPredicted RBP15.05■□□□□ 0
PCDHGA11-201ENST00000398587 GUCY2CP25092 1073 aa15.05■□□□□ 0
PCDHGA11-201ENST00000398587 TMPRSS15P98073 1019 aa15.05■□□□□ 0
PCDHGA11-201ENST00000398587 LAMC2Q13753 1193 aa15.05■□□□□ 0
PCDHGA11-201ENST00000398587 PCNX4Q63HM2 1172 aa15.05■□□□□ 0
PCDHGA11-201ENST00000398587 EFCAB12Q6NXP0 572 aa15.05■□□□□ 0
PCDHGA11-201ENST00000398587 SYTL5Q8TDW5 730 aaPredicted RBP15.05■□□□□ 0
PCDHGA11-201ENST00000398587 TFR2Q9UP52 801 aa15.05■□□□□ 0
PCDHGA11-201ENST00000398587 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.05■□□□□ 0
PCDHGA11-201ENST00000398587 IFT172Q9UG01 1749 aa15.05■□□□□ -0
PCDHGA11-201ENST00000398587 NFIBO00712 420 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms