RNA–Protein interactions for RNA: ENST00000398073.6

CTDSP2-201, Transcript of CTD small phosphatase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP2, Length 4,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-201ENST00000398073 ZNF571Q7Z3V5 609 aaPredicted RBP17.35■□□□□ 0.37
CTDSP2-201ENST00000398073 HDAC7Q8WUI4 952 aa17.35■□□□□ 0.37
CTDSP2-201ENST00000398073 HDAC11Q96DB2 347 aa17.35■□□□□ 0.37
CTDSP2-201ENST00000398073 ERP27Q96DN0 273 aa17.35■□□□□ 0.37
CTDSP2-201ENST00000398073 RPS6KC1Q96S38 1066 aa17.35■□□□□ 0.37
CTDSP2-201ENST00000398073 TMEM117Q9H0C3 514 aa17.35■□□□□ 0.37
CTDSP2-201ENST00000398073 VCPKMTQ9H867 229 aa17.35■□□□□ 0.37
CTDSP2-201ENST00000398073 COPB2P35606 906 aa17.35■□□□□ 0.37
CTDSP2-201ENST00000398073 ESRRGP62508 458 aa17.35■□□□□ 0.37
CTDSP2-201ENST00000398073 ROR1Q01973 937 aa17.35■□□□□ 0.37
CTDSP2-201ENST00000398073 ITKQ08881 620 aa17.35■□□□□ 0.37
CTDSP2-201ENST00000398073 LRRC34Q8IZ02 419 aa17.35■□□□□ 0.37
CTDSP2-201ENST00000398073 PSPC1Q8WXF1 523 aaKnown RBP17.35■□□□□ 0.37
CTDSP2-201ENST00000398073 BAZ2BQ9UIF8 2168 aaKnown RBP17.35■□□□□ 0.37
CTDSP2-201ENST00000398073 PI4K2BG5E9Z4 385 aa17.35■□□□□ 0.37
CTDSP2-201ENST00000398073 BCAR1P56945 870 aa17.35■□□□□ 0.37
CTDSP2-201ENST00000398073 VGLL2Q8N8G2 317 aa17.35■□□□□ 0.37
CTDSP2-201ENST00000398073 ARMC2Q8NEN0 867 aa17.35■□□□□ 0.37
CTDSP2-201ENST00000398073 QTRT2Q9H974 415 aaKnown RBP17.35■□□□□ 0.37
CTDSP2-201ENST00000398073 PSMC3IPQ9P2W1 217 aaPredicted RBP17.35■□□□□ 0.37
CTDSP2-201ENST00000398073 DGAT1O75907 488 aa17.35■□□□□ 0.37
CTDSP2-201ENST00000398073 MX2P20592 715 aa17.35■□□□□ 0.37
CTDSP2-201ENST00000398073 ITGA8P53708 1063 aa17.35■□□□□ 0.37
CTDSP2-201ENST00000398073 SUPT20HL1Q3ZLR7 823 aa17.35■□□□□ 0.37
CTDSP2-201ENST00000398073 SEPT12Q8IYM1 358 aa17.35■□□□□ 0.37
CTDSP2-201ENST00000398073 HIPK4Q8NE63 616 aa17.35■□□□□ 0.37
CTDSP2-201ENST00000398073 CPA5Q8WXQ8 436 aa17.35■□□□□ 0.37
CTDSP2-201ENST00000398073 NACA2Q9H009 215 aa17.35■□□□□ 0.37
CTDSP2-201ENST00000398073 WWP1Q9H0M0 922 aa17.35■□□□□ 0.37
CTDSP2-201ENST00000398073 TMEM8AQ9HCN3 771 aa17.35■□□□□ 0.37
CTDSP2-201ENST00000398073 NDE1Q9NXR1 346 aa17.35■□□□□ 0.37
CTDSP2-201ENST00000398073 SLC5A4Q9NY91 659 aa17.35■□□□□ 0.37
CTDSP2-201ENST00000398073 CFLARO15519 480 aa17.34■□□□□ 0.37
CTDSP2-201ENST00000398073 GPC3P51654 580 aa17.34■□□□□ 0.37
CTDSP2-201ENST00000398073 CENPCQ03188 943 aa17.34■□□□□ 0.37
CTDSP2-201ENST00000398073 ZNF568Q3ZCX4 644 aa17.34■□□□□ 0.37
CTDSP2-201ENST00000398073 SNRNP48Q6IEG0 339 aaKnown RBP17.34■□□□□ 0.37
CTDSP2-201ENST00000398073 BTNL9Q6UXG8 535 aa17.34■□□□□ 0.37
CTDSP2-201ENST00000398073 SENP7Q9BQF6 1050 aa17.34■□□□□ 0.37
CTDSP2-201ENST00000398073 RIOX1Q9H6W3 641 aa17.34■□□□□ 0.37
CTDSP2-201ENST00000398073 ZNF302Q9NR11 478 aa17.34■□□□□ 0.37
CTDSP2-201ENST00000398073 G3BP2Q9UN86 482 aaKnown RBP17.34■□□□□ 0.37
CTDSP2-201ENST00000398073 SDC4P31431 198 aa17.34■□□□□ 0.37
CTDSP2-201ENST00000398073 SLC10A5Q5PT55 438 aa17.34■□□□□ 0.37
CTDSP2-201ENST00000398073 JADE1Q6IE81 842 aa17.34■□□□□ 0.37
CTDSP2-201ENST00000398073 ATMINO43313 823 aaPredicted RBP17.34■□□□□ 0.37
CTDSP2-201ENST00000398073 PFDN1O60925 122 aa17.34■□□□□ 0.37
CTDSP2-201ENST00000398073 RARGP13631 454 aa17.34■□□□□ 0.37
CTDSP2-201ENST00000398073 MAGEA4P43358 317 aa17.34■□□□□ 0.37
CTDSP2-201ENST00000398073 DEUP1Q05D60 604 aa17.34■□□□□ 0.37
CTDSP2-201ENST00000398073 ITIH4Q14624 930 aa17.34■□□□□ 0.37
CTDSP2-201ENST00000398073 DUOXA2Q1HG44 320 aa17.34■□□□□ 0.37
CTDSP2-201ENST00000398073 CIAPIN1Q6FI81 312 aa17.34■□□□□ 0.37
CTDSP2-201ENST00000398073 KRT27Q7Z3Y8 459 aa17.34■□□□□ 0.37
CTDSP2-201ENST00000398073 CES2O00748 559 aa17.33■□□□□ 0.37
CTDSP2-201ENST00000398073 MARK3P27448 753 aa17.33■□□□□ 0.37
CTDSP2-201ENST00000398073 GIT2Q14161 759 aa17.33■□□□□ 0.37
CTDSP2-201ENST00000398073 LMBRD2Q68DH5 695 aaPredicted RBP17.33■□□□□ 0.37
CTDSP2-201ENST00000398073 KRT80Q6KB66 452 aa17.33■□□□□ 0.37
CTDSP2-201ENST00000398073 MRPL4Q9BYD3 311 aaKnown RBP17.33■□□□□ 0.37
CTDSP2-201ENST00000398073 NOD2Q9HC29 1040 aa17.33■□□□□ 0.37
CTDSP2-201ENST00000398073 LOC102724159A0A0B4J2E5 919 aa17.33■□□□□ 0.37
CTDSP2-201ENST00000398073 GTPBP10A4D1E9 387 aaKnown RBP17.33■□□□□ 0.37
CTDSP2-201ENST00000398073 RASSF10A6NK89 507 aa17.33■□□□□ 0.37
CTDSP2-201ENST00000398073 MSH4O15457 936 aa17.33■□□□□ 0.37
CTDSP2-201ENST00000398073 KRT3P12035 628 aa17.33■□□□□ 0.37
CTDSP2-201ENST00000398073 PWP2Q15269 919 aaKnown RBP17.33■□□□□ 0.37
CTDSP2-201ENST00000398073 ANKMY2Q8IV38 441 aa17.33■□□□□ 0.37
CTDSP2-201ENST00000398073 C4orf33Q8N1A6 199 aa17.33■□□□□ 0.37
CTDSP2-201ENST00000398073 FBXO25Q8TCJ0 367 aa17.33■□□□□ 0.37
CTDSP2-201ENST00000398073 SH2D3AQ9BRG2 576 aa17.33■□□□□ 0.37
CTDSP2-201ENST00000398073 RUSC1Q9BVN2 902 aa17.33■□□□□ 0.37
CTDSP2-201ENST00000398073 FOXN3O00409 490 aaPredicted RBP17.33■□□□□ 0.36
CTDSP2-201ENST00000398073 PFDN6O15212 129 aa17.33■□□□□ 0.36
CTDSP2-201ENST00000398073 TRPA1O75762 1119 aa17.33■□□□□ 0.36
CTDSP2-201ENST00000398073 THOC5Q13769 683 aaKnown RBP17.33■□□□□ 0.36
CTDSP2-201ENST00000398073 STRIP1Q5VSL9 837 aa17.33■□□□□ 0.36
CTDSP2-201ENST00000398073 SIX6OS1Q8N1H7 587 aa17.33■□□□□ 0.36
CTDSP2-201ENST00000398073 C2orf40Q9H1Z8 148 aa17.33■□□□□ 0.36
CTDSP2-201ENST00000398073 CNTNAP4Q9C0A0 1308 aa17.33■□□□□ 0.36
CTDSP2-201ENST00000398073 KPNA7A9QM74 516 aa17.33■□□□□ 0.36
CTDSP2-201ENST00000398073 ENTPD3O75355 529 aa17.33■□□□□ 0.36
CTDSP2-201ENST00000398073 KITP10721 976 aa17.33■□□□□ 0.36
CTDSP2-201ENST00000398073 RFC1P35251 1148 aaPredicted RBP17.33■□□□□ 0.36
CTDSP2-201ENST00000398073 CASP4P49662 377 aa17.33■□□□□ 0.36
CTDSP2-201ENST00000398073 NOP14P78316 857 aaKnown RBP17.33■□□□□ 0.36
CTDSP2-201ENST00000398073 TAF1BQ53T94 588 aaPredicted RBP17.33■□□□□ 0.36
CTDSP2-201ENST00000398073 ARMCX2Q7L311 632 aa17.33■□□□□ 0.36
CTDSP2-201ENST00000398073 SDCCAG3Q96C92 435 aa17.33■□□□□ 0.36
CTDSP2-201ENST00000398073 RAB44Q7Z6P3 723 aaPredicted RBP17.32■□□□□ 0.36
CTDSP2-201ENST00000398073 ZNF677Q86XU0 584 aa17.32■□□□□ 0.36
CTDSP2-201ENST00000398073 SULF1Q8IWU6 871 aa17.32■□□□□ 0.36
CTDSP2-201ENST00000398073 TTC1Q99614 292 aa17.32■□□□□ 0.36
CTDSP2-201ENST00000398073 SMYD3Q9H7B4 428 aa17.32■□□□□ 0.36
CTDSP2-201ENST00000398073 NUB1Q9Y5A7 615 aa17.32■□□□□ 0.36
CTDSP2-201ENST00000398073 IGF2BP3O00425 579 aaKnown RBP eCLIP17.32■□□□□ 0.36
CTDSP2-201ENST00000398073 AKAP3O75969 853 aa17.32■□□□□ 0.36
CTDSP2-201ENST00000398073 SCTRP47872 440 aa17.32■□□□□ 0.36
CTDSP2-201ENST00000398073 TNFAIP2Q03169 654 aa17.32■□□□□ 0.36
CTDSP2-201ENST00000398073 ZNF507Q8TCN5 953 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms